Conservation of cofitness between Psest_3840 and Psest_1640 in Pseudomonas stutzeri RCH2

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3840 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) (from data) 1.0 Psest_1640 (p)ppGpp synthetase, RelA/SpoT family 0.33 11
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3332 FAD linked oxidase, N-terminal 0.87 Psyr_3695 RelA/SpoT protein low > 86
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3332 FAD linked oxidase, N-terminal 0.87 Psyr_3695 RelA/SpoT protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_5863 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.90 Pf1N1B4_3508 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_21305 glycolate oxidase 0.89 AO353_02710 (p)ppGpp synthetase low > 101
Pseudomonas sp. RS175 0.70 PFR28_02759 hypothetical protein 0.89 PFR28_03223 GTP pyrophosphokinase low > 88
Pseudomonas putida KT2440 0.70 PP_3746 glycolate oxidase, putative FAD-binding subunit 0.87 PP_1656 ATP:GTP 3'-pyrophosphotransferase low > 96
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_01095 glycolate oxidase 0.90 AO356_19060 (p)ppGpp synthetase low > 104
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_136 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.90 Pf6N2E2_5723 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) low > 103
Escherichia coli Nissle 1917 0.65 ECOLIN_RS17135 glycolate oxidase subunit GlcE 0.46 ECOLIN_RS15515 GTP diphosphokinase low > 52
Escherichia coli ECOR27 0.65 NOLOHH_10925 glcE glycolate oxidase subunit GlcE 0.46 NOLOHH_12125 relA GTP diphosphokinase low > 57
Escherichia coli ECOR38 0.65 HEPCGN_18000 glcE glycolate oxidase subunit GlcE 0.46 HEPCGN_19500 relA GTP diphosphokinase low > 85
Escherichia coli ECRC62 0.65 BNILDI_00590 glcE glycolate oxidase subunit GlcE 0.46 BNILDI_10630 relA GTP diphosphokinase — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS38020 glycolate oxidase subunit GlcE 0.39 QEN71_RS05265 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 153
Escherichia coli BW25113 0.64 b4468 glcE glycolate oxidase FAD binding subunit (NCBI) 0.46 b2784 relA (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) low > 76
Escherichia fergusonii Becca 0.64 EFB2_00836 hypothetical protein 0.46 EFB2_01133 GTP pyrophosphokinase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00728 hypothetical protein 0.46 OHPLBJKB_00947 GTP pyrophosphokinase low > 73
Escherichia coli BL21 0.64 ECD_02847 glycolate oxidase FAD binding subunit 0.46 ECD_02629 (p)ppGpp synthetase I/GTP pyrophosphokinase low > 60
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS31650 FAD-binding protein 0.38 BPHYT_RS13655 GTP pyrophosphokinase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04682 glycolate oxidase FAD binding subunit 0.38 H281DRAFT_04499 GTP pyrophosphokinase low > 103
Paraburkholderia graminis OAS925 0.48 ABIE53_000843 glycolate oxidase FAD binding subunit 0.38 ABIE53_002905 GTP pyrophosphokinase low > 113
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS19100 FAD-binding protein 0.38 HSERO_RS09855 GTP pyrophosphokinase low > 78
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01145 glycolate oxidase subunit GlcE 0.39 ABZR87_RS13745 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 80
Dechlorosoma suillum PS 0.44 Dsui_3414 FAD/FMN-dependent dehydrogenase 0.42 Dsui_2816 (p)ppGpp synthetase, RelA/SpoT family low > 51
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS17310 D-lactate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6) (from data) 0.38 RR42_RS06585 GTP pyrophosphokinase low > 128
Ralstonia solanacearum UW163 0.42 UW163_RS08130 glycolate oxidase subunit GlcE 0.38 UW163_RS15115 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS05495 glycolate oxidase subunit GlcE 0.38 RALBFv3_RS01805 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 76
Ralstonia solanacearum GMI1000 0.42 RS_RS13355 glycolate oxidase subunit GlcE 0.38 RS_RS07930 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.40 33
Castellaniella sp019104865 MT123 0.42 ABCV34_RS06810 glycolate oxidase subunit GlcE 0.35 ABCV34_RS08440 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 48
Variovorax sp. SCN45 0.42 GFF6596 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.33 GFF403 Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I low > 127
Marinobacter adhaerens HP15 0.41 HP15_3023 glycolate oxidase FAD binding subunit 0.63 HP15_791 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA low > 73
Acidovorax sp. GW101-3H11 0.40 Ac3H11_3400 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 0.35 Ac3H11_362 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I low > 79
Ralstonia solanacearum PSI07 0.39 RPSI07_RS11805 glycolate oxidase subunit GlcE 0.39 RPSI07_RS15685 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase low > 81

Not shown: 11 genomes with orthologs for Psest_3840 only; 46 genomes with orthologs for Psest_1640 only