| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Phaeobacter inhibens DSM 17395 | 1.0 | PGA1_c20200 | | two-component signal transduction system, response regulator | 1.0 | PGA1_c12670 | | D-lactate transporter, substrate binding component (from data) | 0.39 | 14 |
| Dinoroseobacter shibae DFL-12 | 0.72 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | 0.85 | Dshi_1404 | | branched-chain amino acid ABC transporter, periplasmic binding protein, putative (RefSeq) | low | > 64 |
| Agrobacterium fabrum C58 | 0.51 | Atu5267 | | two component response regulator | 0.11 | Atu4123 | | branched chain amino acid ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS09500 | | DNA-binding response regulator | 0.13 | RALBFv3_RS08930 | | ABC transporter permease | low | > 76 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_03153 | | two component transcriptional regulator, LuxR family | 0.10 | H281DRAFT_02377 | | amino acid/amide ABC transporter substrate-binding protein, HAAT family | low | > 103 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS04080 | | DNA-binding response regulator | 0.13 | UW163_RS04680 | | ABC transporter permease | — | — |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS05230 | | response regulator transcription factor | 0.12 | ABZR87_RS04205 | | ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS23850 | | DNA-binding response regulator | 0.12 | RPSI07_RS08340 | | ABC transporter permease | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.38 | RS_RS00100 | | DNA-binding response regulator | 0.12 | RS_RS16745 | | ABC transporter permease | low | > 80 |
| Variovorax sp. OAS795 | 0.36 | ABID97_RS22515 | | response regulator transcription factor | 0.12 | ABID97_RS20375 | | ABC transporter substrate-binding protein | low | > 91 |
| Paraburkholderia sabiae LMG 24235 | 0.36 | QEN71_RS32890 | | response regulator transcription factor | 0.12 | QEN71_RS29985 | | ABC transporter substrate-binding protein | low | > 153 |
| Variovorax sp. SCN45 | 0.36 | GFF5818 | | Two-component transcriptional response regulator, NarL/FixJ family | 0.13 | GFF4775 | | Broad-specificity amino acid ABC transporter, substrate-binding protein | low | > 127 |
| Burkholderia phytofirmans PsJN | 0.36 | BPHYT_RS22230 | | LuxR family transcriptional regulator | 0.11 | BPHYT_RS19480 | | ABC transporter permease | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.36 | HSERO_RS09785 | | LuxR family transcriptional regulator | 0.12 | HSERO_RS23985 | | ABC transporter permease | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.34 | RR42_RS20525 | | LuxR family transcriptional regulator | 0.13 | RR42_RS20275 | | ABC transporter permease | low | > 128 |
| Magnetospirillum magneticum AMB-1 | 0.33 | AMB_RS06830 | | DNA-binding response regulator | 0.10 | AMB_RS12335 | | ABC transporter permease | low | > 64 |
| Dechlorosoma suillum PS | 0.33 | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | 0.07 | Dsui_2383 | | hypothetical protein | low | > 51 |
| Pseudomonas putida KT2440 | 0.31 | PP_2126 | | DNA-binding response regulator, LuxR family | 0.11 | PP_0619 | | Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | 0.11 | PFLU_RS19450 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | 0.11 | PFLU_RS19450 | | ABC transporter substrate-binding protein | low | > 109 |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | 0.13 | Ac3H11_1433 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | — | — |
| Pseudomonas simiae WCS417 | 0.30 | PS417_19630 | | LuxR family transcriptional regulator | 0.11 | PS417_17660 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 88 |
| Paraburkholderia graminis OAS925 | 0.30 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | 0.11 | ABIE53_000272 | | branched-chain amino acid transport system substrate-binding protein | low | > 113 |
| Pseudomonas stutzeri RCH2 | 0.30 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | 0.20 | Psest_3108 | | ABC-type branched-chain amino acid transport systems, periplasmic component | low | > 67 |
| Rhodopseudomonas palustris CGA009 | 0.29 | TX73_007655 | | response regulator transcription factor | 0.68 | TX73_017045 | | substrate-binding protein | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.28 | SM_b21520 | | two-component response regulator protein | 0.11 | SMc03121 | | periplasmic binding ABC transporter protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS23610 | | response regulator transcription factor | 0.11 | ABIE40_RS24800 | | ABC transporter substrate-binding protein | low | > 107 |
| Castellaniella sp019104865 MT123 | 0.27 | ABCV34_RS08970 | | response regulator transcription factor | 0.28 | ABCV34_RS00935 | | substrate-binding protein | low | > 48 |
| Azospirillum sp. SherDot2 | 0.26 | MPMX19_03688 | | Response regulator UvrY | 0.13 | MPMX19_06945 | | hypothetical protein | low | > 112 |
| Azospirillum brasilense Sp245 | 0.25 | AZOBR_RS27860 | | regulator | 0.13 | AZOBR_RS16660 | | ABC transporter permease | low | > 97 |
| Marinobacter adhaerens HP15 | 0.25 | HP15_1567 | | two component transcriptional regulator, LuxR family | 0.20 | HP15_2153 | | extracellular ligand-binding receptor | low | > 73 |
Not shown: 64 genomes with orthologs for PGA1_c20200 only; 1 genomes with orthologs for PGA1_c12670 only