Conservation of cofitness between Psest_3715 and Psest_1260 in Pseudomonas stutzeri RCH2

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3715 type IV pilus secretin (or competence protein) PilQ 1.0 Psest_1260 type IV pilus biogenesis/stability protein PilW 0.86 6
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.65 Psyr_1246 TPR repeat protein:TPR repeat protein 0.40 2
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.65 Psyr_1246 TPR repeat protein:TPR repeat protein 0.43 4
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_12495 fimbrial protein 0.63 AO353_15880 pilus assembly protein PilW low > 101
Pseudomonas sp. S08-1 0.73 OH686_10025 Type IV pilus biogenesis protein PilQ 0.64 OH686_17520 type IV pilus biogenesis/stability protein PilW low > 80
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ 0.67 Pf1N1B4_856 Type IV pilus biogenesis protein PilF low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_09395 fimbrial protein 0.67 AO356_06600 pilus assembly protein PilW low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ 0.67 Pf6N2E2_3180 Type IV pilus biogenesis protein PilF low > 103
Pseudomonas sp. RS175 0.70 PFR28_05011 Type 3 secretion system secretin 0.61 PFR28_00295 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_277 Type IV pilus biogenesis protein PilQ 0.64 PfGW456L13_4864 Type IV pilus biogenesis protein PilF low > 87
Marinobacter adhaerens HP15 0.47 HP15_478 type 4 fimbrial biogenesis protein PilQ 0.28 HP15_1491 type IV pilus biogenesis protein PilF — —
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ 0.21 B158DRAFT_1150 type IV pilus biogenesis/stability protein PilW 0.74 4
Acinetobacter radioresistens SK82 0.37 MPMX26_02812 Type 3 secretion system secretin 0.21 MPMX26_00427 Lipopolysaccharide assembly protein B 0.81 14
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1333 Type IV pilus biogenesis protein PilQ 0.19 GFF4865 Type IV pilus biogenesis protein PilF low > 90
Dechlorosoma suillum PS 0.34 Dsui_1191 type IV pilus secretin PilQ/competence protein 0.21 Dsui_3144 type IV pilus biogenesis/stability protein PilW low > 51
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS06945 type IV pilus secretin PilQ 0.20 RALBFv3_RS15265 type IV pilus biogenesis/stability protein PilW — —
Ralstonia solanacearum UW163 0.34 UW163_RS06670 type IV pilus secretin PilQ 0.20 UW163_RS12730 type IV pilus biogenesis/stability protein PilW — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4703 Type IV pilus biogenesis protein PilQ 0.18 Ac3H11_1792 Type IV pilus biogenesis protein PilF 0.37 20
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS19015 secretin 0.18 RR42_RS13150 pilus assembly protein PilW low > 128
Ralstonia solanacearum PSI07 0.33 RPSI07_RS10290 type IV pilus secretin PilQ 0.19 RPSI07_RS18110 type IV pilus biogenesis/stability protein PilW low > 81
Shewanella oneidensis MR-1 0.33 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) 0.23 SO3314 fimbrial biogenesis and twitching motility protein, putative (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.33 ABID97_RS23265 type IV pilus secretin PilQ 0.20 ABID97_RS14215 type IV pilus biogenesis/stability protein PilW 0.93 32
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ 0.19 ABZR87_RS10905 type IV pilus biogenesis/stability protein PilW 0.96 14
Shewanella loihica PV-4 0.33 Shew_0212 type IV pilus secretin PilQ (RefSeq) 0.26 Shew_1288 type IV pilus biogenesis/stability protein PilW (RefSeq) low > 60
Shewanella sp. ANA-3 0.33 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) 0.24 Shewana3_1227 type IV pilus biogenesis/stability protein PilW (RefSeq) — —
Variovorax sp. SCN45 0.32 GFF5323 Type IV pilus biogenesis protein PilQ 0.20 GFF993 Type IV pilus biogenesis protein PilF 0.99 11
Shewanella amazonensis SB2B 0.32 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) 0.26 Sama_2367 fimbrial biogenesis and twitching motility protein, putative (RefSeq) 0.32 14
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS11790 type IV pilus secretin PilQ 0.14 ABZR86_RS05450 type IV pilus biogenesis/stability protein PilW low > 74
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS11855 type IV pilus secretin PilQ 0.14 LRK54_RS00075 type IV pilus biogenesis/stability protein PilW low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS11580 type IV pilus secretin PilQ 0.14 LRK55_RS18070 type IV pilus biogenesis/stability protein PilW 0.50 61
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_12040 pilQ type IV pilus secretin PilQ 0.13 OKGIIK_07135 pilW type IV pilus biogenesis/stability protein PilW low > 52

Not shown: 4 genomes with orthologs for Psest_3715 only; 12 genomes with orthologs for Psest_1260 only