Conservation of cofitness between Echvi_3951 and Echvi_3953 in Echinicola vietnamensis KMM 6221, DSM 17526

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Echinicola vietnamensis KMM 6221, DSM 17526 1.0 Echvi_3951 Proline racemase 1.0 Echvi_3953 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 0.71 3
Pedobacter sp. GW460-11-11-14-LB5 0.71 CA265_RS05710 hydroxyproline-2-epimerase 0.59 CA265_RS05700 dihydrodipicolinate synthase family protein low > 88
Sinorhizobium meliloti 1021 0.66 SM_b20268 hydroxyproline-2-epimerase 0.36 SMc03259 hypothetical protein low > 103
Shewanella loihica PV-4 0.61 Shew_2363 proline racemase (RefSeq) 0.49 Shew_2362 dihydrodipicolinate synthase (RefSeq) 0.42 4
Shewanella amazonensis SB2B 0.60 Sama_1530 hydroxyproline-2-epimerase (RefSeq) 0.47 Sama_1531 dihydrodipicolinate synthetase family protein (RefSeq) 0.39 3
Rhodospirillum rubrum S1H 0.60 Rru_A2065 Proline racemase (NCBI) 0.50 Rru_A2066 Dihydrodipicolinate synthetase (NCBI) low > 58
Azospirillum sp. SherDot2 0.57 MPMX19_03261 4-hydroxyproline 2-epimerase 2 0.21 MPMX19_04548 4-hydroxy-tetrahydrodipicolinate synthase low > 112
Agrobacterium fabrum C58 0.57 Atu3953 hydroxyproline-2-epimerase 0.23 Atu3960 dihydrodipicolinate synthase low > 89
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_3147 4-hydroxyproline epimerase (EC 5.1.1.8) 0.23 PfGW456L13_3142 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.28 79
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_09240 hydroxyproline-2-epimerase 0.39 AO356_24905 4-hydroxy-tetrahydrodipicolinate synthase low > 104
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS34280 4-hydroxyproline epimerase 0.50 QEN71_RS20260 dihydrodipicolinate synthase family protein low > 153
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS28265 hypothetical protein 0.50 BPHYT_RS22635 dihydrodipicolinate synthase low > 109
Azospirillum brasilense Sp245 0.30 AZOBR_RS27830 proline racemase 0.17 AZOBR_RS23300 dihydrodipicolinate synthase low > 97
Castellaniella sp019104865 MT123 0.26 ABCV34_RS10195 4-hydroxyproline epimerase 0.20 ABCV34_RS06245 dihydrodipicolinate synthase family protein low > 48
Pseudomonas sp. RS175 0.25 PFR28_01777 putative trans-3-hydroxy-L-proline dehydratase 0.39 PFR28_01776 4-hydroxy-tetrahydrodipicolinate synthase 0.48 2
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_671 2-methylaconitate racemase 0.38 Pf6N2E2_670 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) low > 103
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_5964 4-hydroxyproline epimerase (EC 5.1.1.8) 0.39 Pf1N1B4_5976 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) low > 87
Acidovorax sp. GW101-3H11 0.25 Ac3H11_4170 4-hydroxyproline epimerase (EC 5.1.1.8) 0.44 Ac3H11_4168 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) 0.36 31
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.2125.1 4-hydroxyproline epimerase (EC 5.1.1.8) 0.39 Xcc-8004.2129.1 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) low > 74
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_14880 hypothetical protein 0.43 AO353_14875 4-hydroxy-tetrahydrodipicolinate synthase low > 101
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_01625 Hydroxyproline-2-epimerase 0.35 OKGIIK_01645 Dihydrodipicolinate synthase family protein low > 52
Pseudomonas putida KT2440 0.24 PP_1258 4-hydroxyproline epimerase 0.21 PP_2036 putative 4-hydroxy-tetrahydrodipicolinate synthase low > 96
Paraburkholderia graminis OAS925 0.23 ABIE53_004085 4-hydroxyproline epimerase 0.51 ABIE53_004086 4-hydroxy-tetrahydrodipicolinate synthase low > 113
Variovorax sp. SCN45 0.23 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) 0.45 GFF7151 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) low > 127
Pseudomonas fluorescens SBW25 0.23 PFLU_RS16200 4-hydroxyproline epimerase 0.17 PFLU_RS06945 dihydrodipicolinate synthase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS16200 4-hydroxyproline epimerase 0.17 PFLU_RS06945 dihydrodipicolinate synthase family protein low > 109
Serratia liquefaciens MT49 0.22 IAI46_09160 4-hydroxyproline epimerase 0.42 IAI46_09150 dihydrodipicolinate synthase family protein low > 86
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS36345 hydroxyproline-2-epimerase 0.39 RR42_RS36370 dihydrodipicolinate synthase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_01193 4-hydroxyproline epimerase 0.20 H281DRAFT_00991 4-hydroxy-tetrahydrodipicolinate synthase low > 103
Pseudomonas simiae WCS417 0.22 PS417_14305 hydroxyproline-2-epimerase 0.18 PS417_06885 dihydrodipicolinate synthase low > 88
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS20470 4-hydroxyproline epimerase 0.41 ABZR86_RS20490 dihydrodipicolinate synthase family protein low > 74

Not shown: 6 genomes with orthologs for Echvi_3951 only; 3 genomes with orthologs for Echvi_3953 only