Conservation of cofitness between Echvi_3953 and Echvi_3951 in Echinicola vietnamensis KMM 6221, DSM 17526

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Echinicola vietnamensis KMM 6221, DSM 17526 1.0 Echvi_3953 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 1.0 Echvi_3951 Proline racemase 0.71 2
Pedobacter sp. GW460-11-11-14-LB5 0.59 CA265_RS05700 dihydrodipicolinate synthase family protein 0.71 CA265_RS05710 hydroxyproline-2-epimerase low > 88
Paraburkholderia graminis OAS925 0.51 ABIE53_004086 4-hydroxy-tetrahydrodipicolinate synthase 0.23 ABIE53_004085 4-hydroxyproline epimerase low > 113
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS22635 dihydrodipicolinate synthase 0.33 BPHYT_RS28265 hypothetical protein low > 109
Rhodospirillum rubrum S1H 0.50 Rru_A2066 Dihydrodipicolinate synthetase (NCBI) 0.60 Rru_A2065 Proline racemase (NCBI) low > 58
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS20260 dihydrodipicolinate synthase family protein 0.50 QEN71_RS34280 4-hydroxyproline epimerase low > 153
Shewanella loihica PV-4 0.49 Shew_2362 dihydrodipicolinate synthase (RefSeq) 0.61 Shew_2363 proline racemase (RefSeq) 0.42 6
Shewanella amazonensis SB2B 0.47 Sama_1531 dihydrodipicolinate synthetase family protein (RefSeq) 0.60 Sama_1530 hydroxyproline-2-epimerase (RefSeq) 0.39 2
Variovorax sp. SCN45 0.45 GFF7151 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) 0.23 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) low > 127
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4168 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) 0.25 Ac3H11_4170 4-hydroxyproline epimerase (EC 5.1.1.8) 0.36 15
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_14875 4-hydroxy-tetrahydrodipicolinate synthase 0.24 AO353_14880 hypothetical protein low > 101
Serratia liquefaciens MT49 0.42 IAI46_09150 dihydrodipicolinate synthase family protein 0.22 IAI46_09160 4-hydroxyproline epimerase low > 86
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS20490 dihydrodipicolinate synthase family protein 0.19 ABZR86_RS20470 4-hydroxyproline epimerase low > 74
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS36370 dihydrodipicolinate synthase 0.22 RR42_RS36345 hydroxyproline-2-epimerase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2129.1 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) 0.24 Xcc-8004.2125.1 4-hydroxyproline epimerase (EC 5.1.1.8) low > 74
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_24905 4-hydroxy-tetrahydrodipicolinate synthase 0.54 AO356_09240 hydroxyproline-2-epimerase low > 104
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_5976 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) 0.25 Pf1N1B4_5964 4-hydroxyproline epimerase (EC 5.1.1.8) low > 87
Pseudomonas sp. RS175 0.39 PFR28_01776 4-hydroxy-tetrahydrodipicolinate synthase 0.25 PFR28_01777 putative trans-3-hydroxy-L-proline dehydratase 0.48 17
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_670 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) 0.25 Pf6N2E2_671 2-methylaconitate racemase low > 103
Sinorhizobium meliloti 1021 0.36 SMc03259 hypothetical protein 0.66 SM_b20268 hydroxyproline-2-epimerase low > 103
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_01645 Dihydrodipicolinate synthase family protein 0.24 OKGIIK_01625 Hydroxyproline-2-epimerase low > 52
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_3142 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.56 PfGW456L13_3147 4-hydroxyproline epimerase (EC 5.1.1.8) 0.28 67
Agrobacterium fabrum C58 0.23 Atu3960 dihydrodipicolinate synthase 0.57 Atu3953 hydroxyproline-2-epimerase low > 89
Azospirillum sp. SherDot2 0.21 MPMX19_04548 4-hydroxy-tetrahydrodipicolinate synthase 0.57 MPMX19_03261 4-hydroxyproline 2-epimerase 2 low > 112
Pseudomonas putida KT2440 0.21 PP_2036 putative 4-hydroxy-tetrahydrodipicolinate synthase 0.24 PP_1258 4-hydroxyproline epimerase low > 96
Castellaniella sp019104865 MT123 0.20 ABCV34_RS06245 dihydrodipicolinate synthase family protein 0.26 ABCV34_RS10195 4-hydroxyproline epimerase low > 48
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_00991 4-hydroxy-tetrahydrodipicolinate synthase 0.22 H281DRAFT_01193 4-hydroxyproline epimerase low > 103
Pseudomonas simiae WCS417 0.18 PS417_06885 dihydrodipicolinate synthase 0.22 PS417_14305 hydroxyproline-2-epimerase low > 88
Pseudomonas fluorescens SBW25 0.17 PFLU_RS06945 dihydrodipicolinate synthase family protein 0.23 PFLU_RS16200 4-hydroxyproline epimerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS06945 dihydrodipicolinate synthase family protein 0.23 PFLU_RS16200 4-hydroxyproline epimerase low > 109
Azospirillum brasilense Sp245 0.17 AZOBR_RS23300 dihydrodipicolinate synthase 0.30 AZOBR_RS27830 proline racemase low > 97

Not shown: 3 genomes with orthologs for Echvi_3953 only; 6 genomes with orthologs for Echvi_3951 only