Conservation of cofitness between EX31_RS21480 and EX31_RS03185 in Rahnella sp. WP5

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 1.0 EX31_RS03185 vitamin B12 ABC transporter substrate-binding protein BtuF 0.61 4
Pectobacterium carotovorum WPP14 0.69 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.56 HER17_RS05645 vitamin B12 ABC transporter substrate-binding protein BtuF low > 75
Serratia liquefaciens MT49 0.65 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.58 IAI46_03570 vitamin B12 ABC transporter substrate-binding protein BtuF low > 86
Dickeya dadantii 3937 0.63 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase 0.56 DDA3937_RS15875 vitamin B12 ABC transporter substrate-binding protein BtuF low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase 0.54 HGI48_RS16015 vitamin B12 ABC transporter substrate-binding protein BtuF low > 71
Escherichia coli Nissle 1917 0.62 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.51 ECOLIN_RS00880 vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia coli ECOR38 0.62 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 HEPCGN_08220 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 87
Escherichia coli ECRC101 0.62 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 MCAODC_00785 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 87
Escherichia coli ECRC98 0.62 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 JDDGAC_13865 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 86
Escherichia coli ECRC99 0.62 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 KEDOAH_17885 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia coli ECRC62 0.62 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 BNILDI_09055 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 75
Escherichia coli ECOR27 0.62 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 NOLOHH_02615 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 75
Escherichia fergusonii Becca 0.62 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 0.52 EFB2_03886 Vitamin B12-binding protein low > 86
Escherichia coli ECRC102 0.62 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 NIAGMN_08120 btuF vitamin B12 ABC transporter substrate-binding protein BtuF
Escherichia coli ECRC100 0.62 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.52 OKFHMN_10270 btuF vitamin B12 ABC transporter substrate-binding protein BtuF low > 80
Enterobacter sp. TBS_079 0.60 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.51 MPMX20_00844 Vitamin B12-binding protein low > 85
Klebsiella michiganensis M5al 0.60 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.51 BWI76_RS05165 cobalamin-binding protein low > 92
Escherichia coli BL21 0.60 ECD_02743 5-formyltetrahydrofolate cyclo-ligase family protein 0.52 ECD_00157 vitamin B12 ABC transporter periplasmic binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 0.52 OHPLBJKB_03504 Vitamin B12-binding protein low > 73
Escherichia coli BW25113 0.60 b2912 ygfA putative ligase (VIMSS) 0.52 b0158 btuF vitamin B12-transporter protein BtuF (NCBI) low > 76
Dickeya dianthicola ME23 0.59 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase 0.54 DZA65_RS17100 vitamin B12 ABC transporter substrate-binding protein BtuF low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.52 GFF63 Vitamin B12 ABC transporter, B12-binding component BtuF low > 78
Pantoea sp. MT58 0.56 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.50 IAI47_15575 vitamin B12 ABC transporter substrate-binding protein BtuF low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase 0.51 EX28DRAFT_3747 ABC-type Fe3+-hydroxamate transport system, periplasmic component low > 76
Shewanella loihica PV-4 0.52 Shew_3069 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.27 Shew_0719 periplasmic binding protein (RefSeq) 0.60 1
Shewanella oneidensis MR-1 0.51 SO0774 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) 0.28 SO3709 ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) 0.79 8
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.42 CSW01_12055 cobalamin-binding protein low > 62
Shewanella sp. ANA-3 0.50 Shewana3_3506 5-formyltetrahydrofolate cyclo-ligase (RefSeq) 0.31 Shewana3_3272 periplasmic binding protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.41 Sama_2726 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) 0.28 Sama_2869 ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) 0.90 3
Pseudomonas stutzeri RCH2 0.31 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.23 Psest_3542 ABC-type Fe3+-hydroxamate transport system, periplasmic component low > 67
Pseudomonas simiae WCS417 0.28 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.27 PS417_25220 iron-hydroxamate ABC transporter substrate-binding protein low > 88
Marinobacter adhaerens HP15 0.28 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.32 HP15_3954 substrate-binding periplasmic (PBP) ABC transporter protein low > 73
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.26 PFLU_RS26855 cobalamin-binding protein low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.26 PFLU_RS26855 cobalamin-binding protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.26 AO353_06665 iron-hydroxamate ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.23 Pf1N1B4_2659 Vitamin B12 ABC transporter, B12-binding component BtuF low > 87
Pseudomonas sp. RS175 0.25 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase 0.21 PFR28_03939 Vitamin B12-binding protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.23 Pf6N2E2_4929 Vitamin B12 ABC transporter, B12-binding component BtuF low > 103
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.24 AO356_14980 iron-hydroxamate ABC transporter substrate-binding protein low > 104
Pseudomonas sp. S08-1 0.24 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.21 OH686_15750 Vitamin B12 ABC transporter, substrate-binding protein BtuF low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_15880 5-formyltetrahydrofolate cyclo-ligase 0.17 CA264_01385 iron ABC transporter substrate-binding protein low > 74
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS28640 5-formyltetrahydrofolate cyclo-ligase 0.32 QEN71_RS25115 cobalamin-binding protein low > 153
Phaeobacter inhibens DSM 17395 0.13 PGA1_c21820 5-formyltetrahydrofolate cycloligase-like protein 0.11 PGA1_c26870 putative periplasmic binding protein
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase 0.34 RR42_RS16095 cobalamin-binding protein 0.31 28

Not shown: 35 genomes with orthologs for EX31_RS21480 only; 14 genomes with orthologs for EX31_RS03185 only