Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Rahnella sp. WP5 | 1.0 | EX31_RS21480 | | 5-formyltetrahydrofolate cyclo-ligase | 1.0 | EX31_RS03185 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.61 | 4 |
Pectobacterium carotovorum WPP14 | 0.69 | HER17_RS19095 | | 5-formyltetrahydrofolate cyclo-ligase | 0.56 | HER17_RS05645 | | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 75 |
Serratia liquefaciens MT49 | 0.65 | IAI46_20895 | | 5-formyltetrahydrofolate cyclo-ligase | 0.58 | IAI46_03570 | | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 86 |
Dickeya dadantii 3937 | 0.63 | DDA3937_RS02410 | | 5-formyltetrahydrofolate cyclo-ligase | 0.56 | DDA3937_RS15875 | | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 74 |
Dickeya dianthicola 67-19 | 0.62 | HGI48_RS02370 | | 5-formyltetrahydrofolate cyclo-ligase | 0.54 | HGI48_RS16015 | | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 71 |
Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS16205 | | 5-formyltetrahydrofolate cyclo-ligase | 0.51 | ECOLIN_RS00880 | | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia coli ECOR38 | 0.62 | HEPCGN_18775 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | HEPCGN_08220 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 87 |
Escherichia coli ECRC101 | 0.62 | MCAODC_10005 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | MCAODC_00785 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 87 |
Escherichia coli ECRC98 | 0.62 | JDDGAC_23125 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | JDDGAC_13865 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 86 |
Escherichia coli ECRC99 | 0.62 | KEDOAH_08655 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | KEDOAH_17885 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia coli ECRC62 | 0.62 | BNILDI_09930 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | BNILDI_09055 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 75 |
Escherichia coli ECOR27 | 0.62 | NOLOHH_11395 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | NOLOHH_02615 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 75 |
Escherichia fergusonii Becca | 0.62 | EFB2_00991 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | EFB2_03886 | | Vitamin B12-binding protein | low | > 86 |
Escherichia coli ECRC102 | 0.62 | NIAGMN_17250 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | NIAGMN_08120 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | — | — |
Escherichia coli ECRC100 | 0.62 | OKFHMN_19485 | ygfA | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | OKFHMN_10270 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 80 |
Enterobacter sp. TBS_079 | 0.60 | MPMX20_03770 | | 5-formyltetrahydrofolate cyclo-ligase | 0.51 | MPMX20_00844 | | Vitamin B12-binding protein | low | > 85 |
Klebsiella michiganensis M5al | 0.60 | BWI76_RS23915 | | 5-formyltetrahydrofolate cyclo-ligase | 0.51 | BWI76_RS05165 | | cobalamin-binding protein | low | > 92 |
Escherichia coli BL21 | 0.60 | ECD_02743 | | 5-formyltetrahydrofolate cyclo-ligase family protein | 0.52 | ECD_00157 | | vitamin B12 ABC transporter periplasmic binding protein | low | > 61 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.60 | OHPLBJKB_00804 | | 5-formyltetrahydrofolate cyclo-ligase | 0.52 | OHPLBJKB_03504 | | Vitamin B12-binding protein | low | > 73 |
Escherichia coli BW25113 | 0.60 | b2912 | ygfA | putative ligase (VIMSS) | 0.52 | b0158 | btuF | vitamin B12-transporter protein BtuF (NCBI) | low | > 76 |
Dickeya dianthicola ME23 | 0.59 | DZA65_RS02475 | | 5-formyltetrahydrofolate cyclo-ligase | 0.54 | DZA65_RS17100 | | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF3012 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.52 | GFF63 | | Vitamin B12 ABC transporter, B12-binding component BtuF | low | > 78 |
Pantoea sp. MT58 | 0.56 | IAI47_03730 | | 5-formyltetrahydrofolate cyclo-ligase | 0.50 | IAI47_15575 | | vitamin B12 ABC transporter substrate-binding protein BtuF | low | > 76 |
Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_2964 | | 5,10-methenyltetrahydrofolate synthetase | 0.51 | EX28DRAFT_3747 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | low | > 76 |
Shewanella loihica PV-4 | 0.52 | Shew_3069 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.27 | Shew_0719 | | periplasmic binding protein (RefSeq) | 0.60 | 1 |
Shewanella oneidensis MR-1 | 0.51 | SO0774 | | 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file) | 0.28 | SO3709 | | ABC transporter, periplasmic substrate-binding protein, putative (NCBI ptt file) | 0.79 | 8 |
Vibrio cholerae E7946 ATCC 55056 | 0.51 | CSW01_12545 | | 5-formyltetrahydrofolate cyclo-ligase | 0.42 | CSW01_12055 | | cobalamin-binding protein | low | > 62 |
Shewanella sp. ANA-3 | 0.50 | Shewana3_3506 | | 5-formyltetrahydrofolate cyclo-ligase (RefSeq) | 0.31 | Shewana3_3272 | | periplasmic binding protein (RefSeq) | low | > 73 |
Shewanella amazonensis SB2B | 0.41 | Sama_2726 | | 5-formyltetrahydrofolate cyclo-ligase family protein (RefSeq) | 0.28 | Sama_2869 | | ABC transporter, periplasmic substrate-binding protein, putative (RefSeq) | 0.90 | 3 |
Pseudomonas stutzeri RCH2 | 0.31 | Psest_0170 | | 5,10-methenyltetrahydrofolate synthetase | 0.23 | Psest_3542 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | low | > 67 |
Pseudomonas simiae WCS417 | 0.28 | PS417_27305 | | 5-formyltetrahydrofolate cyclo-ligase | 0.27 | PS417_25220 | | iron-hydroxamate ABC transporter substrate-binding protein | low | > 88 |
Marinobacter adhaerens HP15 | 0.28 | HP15_3211 | | 5-formyltetrahydrofolate cyclo-ligase | 0.32 | HP15_3954 | | substrate-binding periplasmic (PBP) ABC transporter protein | low | > 73 |
Pseudomonas fluorescens SBW25-INTG | 0.27 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.26 | PFLU_RS26855 | | cobalamin-binding protein | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.27 | PFLU_RS28965 | | 5-formyltetrahydrofolate cyclo-ligase | 0.26 | PFLU_RS26855 | | cobalamin-binding protein | low | > 109 |
Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_08780 | | 5-formyltetrahydrofolate cyclo-ligase | 0.26 | AO353_06665 | | iron-hydroxamate ABC transporter substrate-binding protein | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_2225 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.23 | Pf1N1B4_2659 | | Vitamin B12 ABC transporter, B12-binding component BtuF | low | > 87 |
Pseudomonas sp. RS175 | 0.25 | PFR28_04325 | | 5-formyltetrahydrofolate cyclo-ligase | 0.21 | PFR28_03939 | | Vitamin B12-binding protein | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_4476 | | 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) | 0.23 | Pf6N2E2_4929 | | Vitamin B12 ABC transporter, B12-binding component BtuF | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_12990 | | 5-formyltetrahydrofolate cyclo-ligase | 0.24 | AO356_14980 | | iron-hydroxamate ABC transporter substrate-binding protein | low | > 104 |
Pseudomonas sp. S08-1 | 0.24 | OH686_11225 | | 5-formyltetrahydrofolate cyclo-ligase | 0.21 | OH686_15750 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | low | > 80 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.19 | CA264_15880 | | 5-formyltetrahydrofolate cyclo-ligase | 0.17 | CA264_01385 | | iron ABC transporter substrate-binding protein | low | > 74 |
Paraburkholderia sabiae LMG 24235 | 0.15 | QEN71_RS28640 | | 5-formyltetrahydrofolate cyclo-ligase | 0.32 | QEN71_RS25115 | | cobalamin-binding protein | low | > 153 |
Phaeobacter inhibens DSM 17395 | 0.13 | PGA1_c21820 | | 5-formyltetrahydrofolate cycloligase-like protein | 0.11 | PGA1_c26870 | | putative periplasmic binding protein | — | — |
Cupriavidus basilensis FW507-4G11 | 0.13 | RR42_RS01400 | | 5-formyltetrahydrofolate cyclo-ligase | 0.34 | RR42_RS16095 | | cobalamin-binding protein | 0.31 | 28 |
Not shown: 35 genomes with orthologs for EX31_RS21480 only; 14 genomes with orthologs for EX31_RS03185 only