Conservation of cofitness between EX28DRAFT_1764 and EX28DRAFT_2904 in Enterobacter asburiae PDN3

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_1764 DNA topoisomerase III, bacteria and conjugative plasmid 1.0 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase 0.56 5
Enterobacter sp. TBS_079 0.96 MPMX20_01853 DNA topoisomerase 3 0.98 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_01969 DNA topoisomerase 3 0.94 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system low > 73
Escherichia coli BL21 0.93 ECD_01732 DNA topoisomerase III 0.94 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein low > 61
Escherichia coli BW25113 0.93 b1763 topB DNA topoisomerase III (NCBI) 0.94 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) low > 76
Escherichia coli ECOR27 0.93 NOLOHH_17340 topB DNA topoisomerase III 0.94 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECRC62 0.93 BNILDI_16125 topB DNA topoisomerase III 0.94 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECRC102 0.93 NIAGMN_01235 topB DNA topoisomerase III 0.94 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC101 0.93 MCAODC_18580 topB DNA topoisomerase III 0.94 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli ECRC100 0.93 OKFHMN_26830 topB DNA topoisomerase III 0.94 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase 0.62 62
Escherichia coli ECRC99 0.93 KEDOAH_01280 topB DNA topoisomerase III 0.94 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC98 0.93 JDDGAC_01405 topB DNA topoisomerase III 0.94 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase 0.80 25
Escherichia coli Nissle 1917 0.92 ECOLIN_RS09830 DNA topoisomerase III 0.94 ECOLIN_RS15875 phosphoenolpyruvate--protein phosphotransferase — —
Escherichia fergusonii Becca 0.92 EFB2_02231 DNA topoisomerase 3 0.94 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system low > 86
Escherichia coli ECOR38 0.92 HEPCGN_05200 topB DNA topoisomerase III 0.94 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3486 DNA topoisomerase III (EC 5.99.1.2) 0.95 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS11605 DNA topoisomerase III 0.90 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP low > 92
Serratia liquefaciens MT49 0.84 IAI46_14305 DNA topoisomerase III 0.83 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase low > 86
Rahnella sp. WP5 0.83 EX31_RS06315 DNA topoisomerase III 0.78 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase low > 89
Pectobacterium carotovorum WPP14 0.83 HER17_RS11095 DNA topoisomerase III 0.73 HER17_RS16580 phosphoenolpyruvate--protein phosphotransferase low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS10300 DNA topoisomerase III 0.74 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase low > 74
Dickeya dianthicola ME23 0.81 DZA65_RS10785 DNA topoisomerase III 0.73 DZA65_RS05300 phosphoenolpyruvate--protein phosphotransferase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS10310 DNA topoisomerase III 0.73 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase low > 71
Erwinia tracheiphila SCR3 0.79 LU632_RS12960 DNA topoisomerase III 0.80 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase low > 74
Pantoea sp. MT58 0.79 IAI47_08980 DNA topoisomerase III 0.80 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase low > 76
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_10220 DNA topoisomerase III 0.48 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP low > 62
Shewanella oneidensis MR-1 0.56 SO3061 topB DNA topoisomerase III (NCBI ptt file) 0.40 SO1332 ptsP phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1486 DNA topoisomerase III (RefSeq) 0.40 Shewana3_3042 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 73
Shewanella amazonensis SB2B 0.55 Sama_2145 DNA topoisomerase III (RefSeq) 0.39 Sama_0864 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 62
Shewanella loihica PV-4 0.55 Shew_2299 DNA topoisomerase III (RefSeq) 0.38 Shew_1039 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 60
Marinobacter adhaerens HP15 0.45 HP15_1186 DNA topoisomerase III 0.41 HP15_463 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein low > 73
Pseudomonas putida KT2440 0.34 PP_4019 DNA topoisomerase III 0.39 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) low > 96
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00120 DNA topoisomerase III 0.39 AO356_10350 phosphoenolpyruvate-protein phosphotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster 0.39 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 103
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_1473 DNA topoisomerase III 0.39 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_1473 DNA topoisomerase III 0.39 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS09715 DNA topoisomerase III 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS09715 DNA topoisomerase III 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas stutzeri RCH2 0.33 Psest_1383 DNA topoisomerase III, bacteria and conjugative plasmid 0.39 Psest_3862 phosphoenolpyruvate-protein phosphotransferase low > 67
Pseudomonas simiae WCS417 0.32 PS417_10550 DNA topoisomerase III 0.39 PS417_26985 phosphoenolpyruvate-protein phosphotransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_26780 DNA topoisomerase III 0.38 AO353_08465 phosphoenolpyruvate-protein phosphotransferase low > 101
Pseudomonas sp. RS175 0.32 PFR28_01342 DNA topoisomerase 3 0.38 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_4446 DNA topoisomerase III (EC 5.99.1.2) 0.39 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_3568 DNA topoisomerase III (EC 5.99.1.2) 0.39 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Azospirillum brasilense Sp245 0.16 AZOBR_RS10830 DNA topoisomerase III 0.24 AZOBR_RS18900 peptidase low > 97

Not shown: 10 genomes with orthologs for EX28DRAFT_1764 only; 17 genomes with orthologs for EX28DRAFT_2904 only