Conservation of cofitness between EX28DRAFT_2079 and EX28DRAFT_2715 in Enterobacter asburiae PDN3

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_2079 type II secretion system protein D 1.0 EX28DRAFT_2715 Putative Mg2+ and Co2+ transporter CorB 0.59 11
Enterobacter sp. TBS_079 0.87 MPMX20_01515 Putative secretin GspD 1.00 MPMX20_03482 hypothetical protein low > 85
Rahnella sp. WP5 0.60 EX31_RS16165 type II secretion system secretin GspD 0.85 EX31_RS07740 HlyC/CorC family transporter low > 89
Escherichia coli BW25113 0.54 b3325 yheF putative general protein secretion protein (VIMSS) 0.92 b4461 yfjD predicted inner membrane protein (RefSeq) low > 76
Escherichia coli Nissle 1917 0.54 ECOLIN_RS19060 type II secretion system secretin GspD 0.92 ECOLIN_RS14760 HlyC/CorC family transporter low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00378 Putative type II secretion system protein D 0.93 OHPLBJKB_01094 hypothetical protein low > 73
Escherichia fergusonii Becca 0.53 EFB2_00498 Putative secretin GspD 0.93 EFB2_01280 hypothetical protein low > 86
Klebsiella michiganensis M5al 0.51 BWI76_RS05090 type II secretion system protein GspD 0.93 BWI76_RS21540 membrane protein low > 92
Escherichia coli ECRC98 0.49 JDDGAC_30295 etpD variant type II secretion system secretin EtpD 0.93 JDDGAC_24825 yfjD UPF0053 inner membrane protein YfjD low > 86
Escherichia coli ECRC102 0.49 NIAGMN_28605 etpD variant type II secretion system secretin EtpD 0.92 NIAGMN_18930 yfjD UPF0053 inner membrane protein YfjD — —
Escherichia coli ECRC100 0.49 OKFHMN_00285 etpD variant type II secretion system secretin EtpD 0.93 OKFHMN_21160 yfjD UPF0053 inner membrane protein YfjD low > 80
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_13790 type II secretion system protein GspD 0.67 CSW01_02980 HlyC/CorC family transporter — —
Alteromonas macleodii MIT1002 0.41 MIT1002_03976 Pullulanase secretion envelope PulD 0.55 MIT1002_01294 Hemolysin C low > 70
Shewanella oneidensis MR-1 0.40 SO0166 gspD general secretion pathway protein D (NCBI ptt file) 0.58 SO1354 hemolysin protein, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.40 Shewana3_0151 general secretion pathway protein D (RefSeq) 0.59 Shewana3_3020 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.40 Shew_3619 general secretion pathway protein D (RefSeq) 0.59 Shew_1060 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_0169 type II and III secretion system protein (RefSeq) 0.61 Sama_0886 hypothetical protein (RefSeq) low > 62
Escherichia coli ECOR27 0.39 NOLOHH_10975 gspD general secretion pathway protein D 0.93 NOLOHH_12835 yfjD UPF0053 inner membrane protein YfjD low > 75
Escherichia coli ECOR38 0.39 HEPCGN_18050 gspD general secretion pathway protein D 0.93 HEPCGN_20280 yfjD UPF0053 inner membrane protein YfjD low > 87
Escherichia coli BL21 0.39 ECD_02838 putative type II secretion protein GspD 0.89 ECD_02501 UPF0053 family inner membrane protein low > 61
Erwinia tracheiphila SCR3 0.34 LU632_RS25230 gspD type II secretion system secretin GspD 0.84 LU632_RS15680 HlyC/CorC family transporter low > 74
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_0689 general secretion pathway protein D 0.51 B158DRAFT_2258 Putative Mg2+ and Co2+ transporter CorB low > 40
Marinobacter adhaerens HP15 0.23 HP15_2355 type II and III secretion system protein 0.52 HP15_755 Mg2+ and Co2+ transporter CorB low > 73
Pseudomonas stutzeri RCH2 0.23 Psest_2577 general secretion pathway protein D 0.49 Psest_3136 Putative Mg2+ and Co2+ transporter CorB low > 67
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_09345 type II secretion system protein GspD 0.27 AO356_06420 transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_651 General secretion pathway protein D 0.27 Pf6N2E2_3152 Magnesium and cobalt efflux protein CorC low > 103
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS03450 type II secretion system secretin GspD 0.38 ABZR87_RS01840 HlyC/CorC family transporter low > 80
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_12545 type II secretion system protein GspD 0.28 AO353_04400 transporter low > 101
Pseudomonas fluorescens SBW25 0.20 PFLU_RS11890 type II secretion system secretin GspD 0.26 PFLU_RS24595 DUF21 domain-containing protein 0.45 49
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS11890 type II secretion system secretin GspD 0.26 PFLU_RS24595 DUF21 domain-containing protein low > 109
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_266 General secretion pathway protein D 0.28 PfGW456L13_1713 Magnesium and cobalt efflux protein CorC low > 87
Caulobacter crescentus NA1000 0.19 CCNA_00172 type II secretion pathway protein D 0.30 CCNA_03112 magnesium and cobalt efflux protein corB low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00172 type II secretion pathway protein D 0.30 CCNA_03112 magnesium and cobalt efflux protein corB low > 67
Pseudomonas simiae WCS417 0.19 PS417_11295 general secretion pathway protein GspD 0.27 PS417_22935 hypothetical protein low > 88
Ralstonia solanacearum GMI1000 0.17 RS_RS15640 type II secretion system protein GspD 0.37 RS_RS14125 HlyC/CorC family transporter low > 80
Ralstonia solanacearum PSI07 0.17 RPSI07_RS09520 type II secretion system protein GspD 0.36 RPSI07_RS11065 HlyC/CorC family transporter low > 81
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS07740 type II secretion system protein GspD 0.37 RALBFv3_RS06175 HlyC/CorC family transporter low > 76
Ralstonia solanacearum UW163 0.17 UW163_RS05885 type II secretion system protein GspD 0.37 UW163_RS07450 HlyC/CorC family transporter — —
Pseudomonas putida KT2440 0.16 PP_1046 Type II secretion pathway protein XcpQ 0.27 PP_1459 CBS domain protein low > 96
Pseudomonas sp. RS175 0.15 PFR28_01750 Secretin XcpQ 0.27 PFR28_00324 hypothetical protein low > 88

Not shown: 14 genomes with orthologs for EX28DRAFT_2079 only; 23 genomes with orthologs for EX28DRAFT_2715 only