Conservation of cofitness between EX28DRAFT_1224 and EX28DRAFT_1254 in Enterobacter asburiae PDN3

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_1224 benzoate transporter 1.0 EX28DRAFT_1254 Transcriptional regulator 0.63 8
Enterobacter sp. TBS_079 0.81 MPMX20_02242 Inner membrane protein YdcO 0.95 MPMX20_02212 HTH-type transcriptional regulator GbpR low > 85
Escherichia coli ECOR38 0.70 HEPCGN_26210 ydcO BenE family transporter YdcO 0.83 HEPCGN_26160 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 87
Escherichia coli BW25113 0.69 b1433 b1433 putative membrane transport protein (VIMSS) 0.83 b1422 ydcI putative transcriptional regulator LYSR-type (VIMSS) low > 76
Escherichia coli BL21 0.69 ECD_01391 BenE family inner membrane putative transporter 0.83 ECD_01379 putative DNA-binding transcriptional regulator low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_02282 Inner membrane protein YdcO 0.83 OHPLBJKB_02293 HTH-type transcriptional regulator CatM low > 73
Escherichia coli ECOR27 0.69 NOLOHH_19285 ydcO BenE family transporter YdcO 0.83 NOLOHH_19335 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 75
Escherichia coli ECRC100 0.69 OKFHMN_01610 ydcO BenE family transporter YdcO 0.83 OKFHMN_01655 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 80
Escherichia coli ECRC99 0.69 KEDOAH_26830 ydcO BenE family transporter YdcO 0.83 KEDOAH_26785 ydcI Uncharacterized HTH-type transcriptional regulator YdcI — —
Escherichia coli ECRC98 0.69 JDDGAC_04100 ydcO BenE family transporter YdcO 0.83 JDDGAC_04145 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 86
Escherichia coli ECRC102 0.69 NIAGMN_25745 ydcO BenE family transporter YdcO 0.83 NIAGMN_25790 ydcI Uncharacterized HTH-type transcriptional regulator YdcI — —
Escherichia coli Nissle 1917 0.69 ECOLIN_RS08270 BenE family transporter YdcO 0.83 ECOLIN_RS08220 LysR substrate-binding domain-containing protein — —
Escherichia coli ECRC62 0.69 BNILDI_17735 ydcO BenE family transporter YdcO 0.83 BNILDI_17790 ydcI Uncharacterized HTH-type transcriptional regulator YdcI low > 75
Escherichia fergusonii Becca 0.69 EFB2_02549 Inner membrane protein YdcO 0.83 EFB2_02558 HTH-type transcriptional regulator CatM low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF2596 Benzoate transport protein 0.87 GFF2615 LysR family transcriptional regulator YdcI low > 78
Klebsiella michiganensis M5al 0.64 BWI76_RS13360 benzoate transporter 0.87 BWI76_RS13280 LysR family transcriptional regulator low > 92
Serratia liquefaciens MT49 0.54 IAI46_11435 benzoate/H(+) symporter BenE family transporter 0.52 IAI46_12810 LysR family transcriptional regulator low > 86
Pantoea sp. MT58 0.51 IAI47_10270 benzoate/H(+) symporter BenE family transporter 0.70 IAI47_09590 LysR family transcriptional regulator low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF2649 Benzoate transport protein 0.18 GFF270 Transcriptional regulator, LysR family low > 90
Variovorax sp. SCN45 0.43 GFF6323 Benzoate transport protein 0.35 GFF2191 Pca operon transcriptional activator PcaQ low > 127
Variovorax sp. OAS795 0.42 ABID97_RS04625 benzoate/H(+) symporter BenE family transporter 0.36 ABID97_RS24375 LysR substrate-binding domain-containing protein low > 91
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.5286.1 Benzoate transport protein 0.19 Xcc-8004.4253.1 Transcriptional regulator, LysR family low > 74
Pseudomonas putida KT2440 0.41 PP_1820 Benzoate transport protein 0.33 PP_1713 Transcriptional regulator PcaQ low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_1839 Benzoate membrane transport protein 0.30 Psyr_2121 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_1839 Benzoate membrane transport protein 0.30 Psyr_2121 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Paraburkholderia graminis OAS925 0.41 ABIE53_001417 benzoate membrane transport protein 0.36 ABIE53_004922 LysR family pca operon transcriptional activator low > 113
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS06050 membrane protein 0.35 BPHYT_RS33450 LysR family transcriptional regulator low > 109
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29480 putative inner membrane transport protein 0.28 PGA1_c02580 putative HTH-type transcriptional regulator pcaQ low > 62
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5299 Benzoate transport protein 0.18 Pf6N2E2_1106 Chromosome initiation inhibitor low > 103
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_00287 benzoate membrane transport protein 0.35 H281DRAFT_03866 transcriptional regulator, LysR family low > 103
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_819 Benzoate transport protein 0.31 Pf1N1B4_5585 LysR family transcriptional regulator YdcI low > 87
Acidovorax sp. GW101-3H11 0.39 Ac3H11_710 Benzoate transport protein 0.19 Ac3H11_613 Galactose-binding protein regulator low > 79
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4089 Benzoate transport protein 0.17 PfGW456L13_3928 Chromosome initiation inhibitor low > 87
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_02585 hypothetical protein 0.18 AO356_26165 LysR family transcriptional regulator low > 104
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS24590 benzoate/H(+) symporter BenE family transporter 0.36 QEN71_RS14825 pca operon transcription factor PcaQ low > 153
Azospirillum sp. SherDot2 0.36 MPMX19_03070 Inner membrane protein YdcO 0.20 MPMX19_06223 HTH-type transcriptional regulator GbpR low > 112
Azospirillum brasilense Sp245 0.36 AZOBR_RS19910 benzoate transporter 0.20 AZOBR_RS31235 transcriptional regulator low > 97
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS14695 membrane protein 0.36 RR42_RS32070 LysR family transcriptional regulator low > 128
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS06580 benzoate transporter 0.24 HSERO_RS05215 LysR family transcriptional regulator low > 78
Sinorhizobium meliloti 1021 0.29 SMc02691 membrane transporter 0.30 SM_b20580 LysR family transcriptional regulator low > 103
Rhizobium sp. OAE497 0.29 ABIE40_RS13335 benzoate/H(+) symporter BenE family transporter 0.29 ABIE40_RS19620 pca operon transcription factor PcaQ low > 107
Agrobacterium fabrum C58 0.29 Atu2265 benzoate transport protein 0.30 Atu4543 LysR family transcriptional regulator low > 89
Marinobacter adhaerens HP15 0.18 HP15_1094 benzoate membrane transport protein 0.14 HP15_2680 protein containing LysR, substrate-binding / Bacterial regulatory protein, LysR low > 73

Not shown: 21 genomes with orthologs for EX28DRAFT_1224 only; 7 genomes with orthologs for EX28DRAFT_1254 only