Conservation of cofitness between ECD_02087 and ECD_03216 in Escherichia coli BL21

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02087 UPF0324 family inner membrane protein 1.0 ECD_03216 nitrite reductase, large subunit, NAD(P)H-binding low > 61
Escherichia coli BW25113 1.00 b2158 yeiH conserved inner membrane protein (NCBI) 1.00 b3365 nirB nitrite reductase, large subunit, NAD(P)H-binding (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_27450 yeiH UPF0324 membrane protein YeiH 1.00 JDDGAC_20825 nirB NADPH-nitrite reductase large subunit 0.52 41
Escherichia coli ECRC100 1.00 OKFHMN_23490 yeiH UPF0324 membrane protein YeiH 1.00 OKFHMN_17195 nirB NADPH-nitrite reductase large subunit low > 80
Escherichia coli ECRC62 1.00 BNILDI_13985 yeiH UPF0324 membrane protein YeiH 1.00 BNILDI_02525 nirB NADPH-nitrite reductase large subunit low > 75
Escherichia coli ECOR38 1.00 HEPCGN_22755 yeiH UPF0324 membrane protein YeiH 1.00 HEPCGN_16025 nirB NADPH-nitrite reductase large subunit low > 87
Escherichia coli ECRC101 1.00 MCAODC_14540 yeiH UPF0324 membrane protein YeiH 1.00 MCAODC_07725 nirB NADPH-nitrite reductase large subunit low > 87
Escherichia coli ECRC102 1.00 NIAGMN_21255 yeiH UPF0324 membrane protein YeiH 1.00 NIAGMN_14965 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli ECRC99 1.00 KEDOAH_04695 yeiH UPF0324 membrane protein YeiH 1.00 KEDOAH_10945 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli ECOR27 1.00 NOLOHH_15065 yeiH UPF0324 membrane protein YeiH 1.00 NOLOHH_08995 nirB NADPH-nitrite reductase large subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01553 hypothetical protein 1.00 OHPLBJKB_00337 Nitrite reductase [NAD(P)H] 0.37 19
Escherichia fergusonii Becca 1.00 EFB2_01698 hypothetical protein 1.00 EFB2_00457 Nitrite reductase [NAD(P)H] low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12635 YeiH family protein 1.00 ECOLIN_RS19270 NADPH-nitrite reductase large subunit low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3775 Putative membrane protein YeiH 0.93 GFF3704 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) low > 78
Enterobacter sp. TBS_079 0.86 MPMX20_03129 hypothetical protein 0.92 MPMX20_04269 Nitrite reductase [NAD(P)H] low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0398 conserved hypothetical integral membrane protein 0.93 EX28DRAFT_4162 nitrite reductase [NAD(P)H], large subunit low > 76
Klebsiella michiganensis M5al 0.83 BWI76_RS19695 membrane protein 0.95 BWI76_RS26040 nitrite reductase large subunit low > 92
Serratia liquefaciens MT49 0.61 IAI46_17220 YeiH family putative sulfate export transporter 0.84 IAI46_23655 nitrite reductase large subunit low > 86
Rahnella sp. WP5 0.59 EX31_RS19055 YeiH family putative sulfate export transporter 0.83 EX31_RS04670 nitrite reductase large subunit low > 89
Pectobacterium carotovorum WPP14 0.48 HER17_RS12845 YeiH family protein 0.84 HER17_RS01845 nitrite reductase large subunit NirB low > 75
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS21580 membrane protein 0.62 HSERO_RS14535 nitrite reductase 0.72 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF332 Putative membrane protein YeiH 0.26 GFF3665 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) low > 90
Variovorax sp. SCN45 0.42 GFF1741 UPF0324 inner membrane protein YeiH 0.26 GFF4734 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) low > 127
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS07240 YeiH family protein 0.63 QEN71_RS37810 nitrite reductase large subunit NirB low > 153
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_05208 conserved hypothetical integral membrane protein 0.62 H281DRAFT_00967 assimilatory nitrite reductase (NAD(P)H) large subunit precursor (EC 1.7.1.4) low > 103
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS11315 membrane protein 0.63 BPHYT_RS09840 nitrite reductase — —
Dechlorosoma suillum PS 0.31 Dsui_2230 conserved hypothetical integral membrane protein 0.27 Dsui_1825 NAD(P)H-dependent nitrite reductase, large subunit low > 51
Paraburkholderia graminis OAS925 0.31 ABIE53_002342 putative integral membrane protein (TIGR00698 family) 0.63 ABIE53_002205 nitrite reductase (NADH) large subunit low > 113
Pseudomonas putida KT2440 0.31 PP_3661 conserved membrane protein of unknown function, UPF0324 family 0.56 PP_1705 nitrite reductase [NAD(P)H] large subunit low > 96
Ralstonia solanacearum GMI1000 0.30 RS_RS05520 YeiH family putative sulfate export transporter 0.62 RS_RS23035 nitrite reductase large subunit low > 80
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS10370 YeiH family protein 0.62 ABZR87_RS18870 nitrite reductase large subunit NirB low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS18650 YeiH family putative sulfate export transporter 0.63 RPSI07_RS05610 nitrite reductase large subunit low > 81
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS13960 hypothetical protein 0.64 RR42_RS31785 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 128
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS14710 YeiH family putative sulfate export transporter 0.62 RALBFv3_RS17995 nitrite reductase large subunit low > 76
Ralstonia solanacearum UW163 0.28 UW163_RS12180 YeiH family putative sulfate export transporter 0.62 UW163_RS21135 nitrite reductase large subunit — —
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS19775 YeiH family protein 0.60 ABZR86_RS03855 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 74
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_4898 Inner membrane protein 0.26 PfGW456L13_4101 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 87
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_5992 Inner membrane protein 0.55 Pf1N1B4_5042 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) — —
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_21030 hypothetical protein 0.25 AO353_00805 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 101
Alteromonas macleodii MIT1002 0.18 MIT1002_03827 hypothetical protein 0.60 MIT1002_00698 Nitrite reductase [NAD(P)H] 0.46 11
Sinorhizobium meliloti 1021 0.17 SMa1737 hypothetical protein 0.28 SM_b20984 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 103
Dinoroseobacter shibae DFL-12 0.16 Dshi_1827 hypothetical protein (RefSeq) 0.28 Dshi_1667 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 64
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS12585 YeiH family protein 0.53 ABZR88_RS16910 nitrite reductase large subunit NirB low > 71
Azospirillum brasilense Sp245 0.15 AZOBR_RS32555 membrane protein 0.29 AZOBR_RS18565 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 97
Azospirillum sp. SherDot2 0.13 MPMX19_02876 hypothetical protein 0.30 MPMX19_05926 Nitrite reductase [NAD(P)H] low > 112

Not shown: 22 genomes with orthologs for ECD_02087 only; 24 genomes with orthologs for ECD_03216 only