Conservation of cofitness between ECD_02087 and ECD_03016 in Escherichia coli BL21

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02087 UPF0324 family inner membrane protein 1.0 ECD_03016 DnaA initiator-associating factor for replication initiation low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01553 hypothetical protein 1.00 OHPLBJKB_00551 DnaA initiator-associating protein DiaA low > 73
Escherichia coli ECOR27 1.00 NOLOHH_15065 yeiH UPF0324 membrane protein YeiH 1.00 NOLOHH_10020 diaA DnaA initiator-associating protein DiaA low > 75
Escherichia coli ECRC102 1.00 NIAGMN_21255 yeiH UPF0324 membrane protein YeiH 1.00 NIAGMN_15980 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC101 1.00 MCAODC_14540 yeiH UPF0324 membrane protein YeiH 1.00 MCAODC_08740 diaA DnaA initiator-associating protein DiaA low > 87
Escherichia coli BW25113 1.00 b2158 yeiH conserved inner membrane protein (NCBI) 1.00 b3149 yraO DnaA initiator-associating factor for replication initiation (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_27450 yeiH UPF0324 membrane protein YeiH 1.00 JDDGAC_21845 diaA DnaA initiator-associating protein DiaA low > 86
Escherichia coli ECRC99 1.00 KEDOAH_04695 yeiH UPF0324 membrane protein YeiH 1.00 KEDOAH_09930 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC100 1.00 OKFHMN_23490 yeiH UPF0324 membrane protein YeiH 1.00 OKFHMN_18220 diaA DnaA initiator-associating protein DiaA low > 80
Escherichia coli ECOR38 1.00 HEPCGN_22755 yeiH UPF0324 membrane protein YeiH 0.99 HEPCGN_17095 diaA DnaA initiator-associating protein DiaA low > 87
Escherichia coli ECRC62 1.00 BNILDI_13985 yeiH UPF0324 membrane protein YeiH 0.99 BNILDI_01510 diaA DnaA initiator-associating protein DiaA low > 75
Escherichia fergusonii Becca 1.00 EFB2_01698 hypothetical protein 1.00 EFB2_00674 DnaA initiator-associating protein DiaA low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12635 YeiH family protein 1.00 ECOLIN_RS18100 DnaA initiator-associating protein DiaA low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3775 Putative membrane protein YeiH 0.97 GFF1518 Phosphoheptose isomerase (EC 5.3.1.-) low > 78
Enterobacter sp. TBS_079 0.86 MPMX20_03129 hypothetical protein 0.99 MPMX20_04053 DnaA initiator-associating protein DiaA low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0398 conserved hypothetical integral membrane protein 0.99 EX28DRAFT_3198 Phosphoheptose isomerase low > 76
Klebsiella michiganensis M5al 0.83 BWI76_RS19695 membrane protein 0.98 BWI76_RS24925 DnaA initiator-associating protein DiaA low > 92
Serratia liquefaciens MT49 0.61 IAI46_17220 YeiH family putative sulfate export transporter 0.97 IAI46_22310 DnaA initiator-associating protein DiaA low > 86
Rahnella sp. WP5 0.59 EX31_RS19055 YeiH family putative sulfate export transporter 0.94 EX31_RS12535 DnaA initiator-associating protein DiaA low > 89
Pantoea sp. MT58 0.53 IAI47_06670 YeiH family putative sulfate export transporter 0.95 IAI47_02835 DnaA initiator-associating protein DiaA low > 76
Dickeya dadantii 3937 0.51 DDA3937_RS09255 YeiH family putative sulfate export transporter 0.95 DDA3937_RS01700 DnaA initiator-associating protein DiaA low > 74
Erwinia tracheiphila SCR3 0.50 LU632_RS17300 YeiH family putative sulfate export transporter 0.92 LU632_RS02215 diaA DnaA initiator-associating protein DiaA low > 74
Dickeya dianthicola ME23 0.50 DZA65_RS09585 YeiH family putative sulfate export transporter 0.95 DZA65_RS01670 DnaA initiator-associating protein DiaA low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS09280 YeiH family putative sulfate export transporter 0.95 HGI48_RS01595 DnaA initiator-associating protein DiaA low > 71
Pectobacterium carotovorum WPP14 0.48 HER17_RS12845 YeiH family protein 0.94 HER17_RS19875 DnaA initiator-associating protein DiaA low > 75
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS21580 membrane protein 0.46 HSERO_RS23360 phosphoheptose isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF332 Putative membrane protein YeiH 0.37 GFF2717 Phosphoheptose isomerase (EC 5.3.1.-) — —
Variovorax sp. SCN45 0.42 GFF1741 UPF0324 inner membrane protein YeiH 0.32 GFF3737 DnaA initiator-associating protein DiaA — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS07240 YeiH family protein 0.46 QEN71_RS00665 phosphoheptose isomerase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_05208 conserved hypothetical integral membrane protein 0.52 H281DRAFT_02150 phosphoheptose isomerase low > 103
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS11315 membrane protein 0.50 BPHYT_RS01950 phosphoheptose isomerase — —
Dechlorosoma suillum PS 0.31 Dsui_2230 conserved hypothetical integral membrane protein 0.50 Dsui_0100 phosphoheptose isomerase — —
Paraburkholderia graminis OAS925 0.31 ABIE53_002342 putative integral membrane protein (TIGR00698 family) 0.51 ABIE53_000472 D-sedoheptulose 7-phosphate isomerase low > 113
Pseudomonas putida KT2440 0.31 PP_3661 conserved membrane protein of unknown function, UPF0324 family 0.58 PP_1323 factor modulating bacterial replication archosome assembly — —
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS13960 hypothetical protein 0.50 RR42_RS19730 phosphoheptose isomerase — —
Rhodopseudomonas palustris CGA009 0.24 TX73_009105 YeiH family protein 0.32 TX73_020660 D-sedoheptulose 7-phosphate isomerase — —
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS12830 YeiH family protein 0.42 LRK54_RS05630 D-sedoheptulose 7-phosphate isomerase low > 59
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS19775 YeiH family protein 0.42 ABZR86_RS18770 SIS domain-containing protein low > 74
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_4898 Inner membrane protein 0.58 PfGW456L13_1640 Phosphoheptose isomerase (EC 5.3.1.-) — —
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_5992 Inner membrane protein 0.57 Pf1N1B4_956 Phosphoheptose isomerase (EC 5.3.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_21030 hypothetical protein 0.57 AO353_15275 phosphoheptose isomerase — —
Alteromonas macleodii MIT1002 0.18 MIT1002_03827 hypothetical protein 0.66 MIT1002_03117 DnaA initiator-associating protein DiaA low > 70
Shewanella oneidensis MR-1 0.14 SO4708 conserved hypothetical protein (NCBI ptt file) 0.66 SO0298 gmhA phosphoheptose isomerase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.14 Shewana3_4061 hypothetical protein (RefSeq) 0.66 Shewana3_3882 phosphoheptose isomerase (RefSeq) low > 73
Shewanella loihica PV-4 0.14 Shew_3668 hypothetical protein (RefSeq) 0.66 Shew_0225 phosphoheptose isomerase (RefSeq) low > 60
Azospirillum sp. SherDot2 0.13 MPMX19_02876 hypothetical protein 0.32 MPMX19_06611 Phosphoheptose isomerase — —

Not shown: 21 genomes with orthologs for ECD_02087 only; 18 genomes with orthologs for ECD_03016 only