Conservation of cofitness between ECD_00971 and ECD_02720 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent 1.0 ECD_02720 uric acid permease 0.61 5
Escherichia coli BW25113 1.00 b0967 yccW predicted methyltransferase (RefSeq) 1.00 b2888 ygfU putative permease (VIMSS) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 ECOLIN_RS16090 urate/proton symporter UacT — —
Escherichia coli ECOR27 0.99 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 NOLOHH_11535 uacT urate/proton symporter UacT low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I 1.00 OHPLBJKB_00828 Uric acid transporter UacT low > 73
Escherichia coli ECOR38 0.99 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 HEPCGN_18895 uacT urate/proton symporter UacT low > 87
Escherichia coli ECRC100 0.98 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 OKFHMN_19605 uacT urate/proton symporter UacT low > 80
Escherichia coli ECRC102 0.98 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 NIAGMN_17375 uacT urate/proton symporter UacT — —
Escherichia coli ECRC99 0.98 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 KEDOAH_08530 uacT urate/proton symporter UacT — —
Escherichia coli ECRC98 0.98 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 JDDGAC_23250 uacT urate/proton symporter UacT low > 86
Escherichia coli ECRC62 0.98 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 BNILDI_10060 uacT urate/proton symporter UacT low > 75
Escherichia coli ECRC101 0.98 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 1.00 MCAODC_10130 uacT urate/proton symporter UacT low > 87
Escherichia fergusonii Becca 0.98 EFB2_03104 Ribosomal RNA large subunit methyltransferase I 1.00 EFB2_01014 Uric acid transporter UacT low > 86
Klebsiella michiganensis M5al 0.90 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.37 BWI76_RS17555 permease low > 92
Serratia liquefaciens MT49 0.85 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.27 IAI46_04290 purine permease low > 86
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS05070 class I SAM-dependent rRNA methyltransferase 0.49 ABZR87_RS15085 nucleobase:cation symporter-2 family protein low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS23695 class I SAM-dependent rRNA methyltransferase 0.48 RPSI07_RS14075 purine permease low > 81
Ralstonia solanacearum UW163 0.47 UW163_RS03910 class I SAM-dependent rRNA methyltransferase 0.48 UW163_RS10490 purine permease — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS09670 class I SAM-dependent rRNA methyltransferase 0.48 RALBFv3_RS03235 purine permease low > 76
Ralstonia solanacearum GMI1000 0.47 RS_RS00255 class I SAM-dependent rRNA methyltransferase 0.48 RS_RS10625 purine permease low > 80
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS00350 class I SAM-dependent rRNA methyltransferase 0.51 QEN71_RS02545 nucleobase:cation symporter-2 family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02203 SAM-dependent methyltransferase /23S rRNA m(5)C-1962 methyltransferase 0.51 H281DRAFT_04168 nucleobase:cation symporter-2, NCS2 family low > 103
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS01650 23S rRNA methyltransferase 0.53 BPHYT_RS16160 purine permease low > 109
Paraburkholderia graminis OAS925 0.45 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase 0.51 ABIE53_003405 xanthine permease low > 113
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS01670 23S rRNA methyltransferase 0.49 RR42_RS05260 purine permease low > 128
Variovorax sp. SCN45 0.40 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) 0.49 GFF5230 Xanthine-uracil permease — —
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2000 LSU m5C1962 methyltransferase RlmI 0.46 Ac3H11_1081 Xanthine-uracil permease low > 79
Variovorax sp. OAS795 0.39 ABID97_RS06155 class I SAM-dependent methyltransferase 0.46 ABID97_RS22265 nucleobase:cation symporter-2 family protein 0.37 89
Azospirillum brasilense Sp245 0.27 AZOBR_RS01190 SAM-dependent methyltransferase 0.54 AZOBR_RS30760 purine permease low > 97
Pseudomonas putida KT2440 0.26 PP_5127 ribosomal RNA large subunit methyltransferase I 0.41 PP_4290 uric acid permease low > 96
Pseudomonas stutzeri RCH2 0.26 Psest_0236 Predicted SAM-dependent methyltransferases 0.41 Psest_1195 xanthine permease low > 67
Pseudomonas sp. RS175 0.26 PFR28_04274 Ribosomal RNA large subunit methyltransferase I 0.31 PFR28_01209 Uric acid transporter UacT low > 88
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2307 LSU m5C1962 methyltransferase RlmI 0.30 Pf1N1B4_34 Xanthine permease low > 87
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_977 LSU m5C1962 methyltransferase RlmI 0.42 PfGW456L13_4185 Xanthine permease low > 87
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_08330 SAM-dependent methyltransferase 0.41 AO353_02345 purine permease low > 101
Pseudomonas simiae WCS417 0.26 PS417_26880 SAM-dependent methyltransferase 0.42 PS417_19440 purine permease low > 88
Pseudomonas fluorescens SBW25 0.26 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.42 PFLU_RS21410 purine permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.42 PFLU_RS21410 purine permease low > 109
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_4566 LSU m5C1962 methyltransferase RlmI 0.31 Pf6N2E2_2235 Xanthine permease low > 103
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_13260 SAM-dependent methyltransferase 0.31 AO356_01840 uracil permease low > 104
Azospirillum sp. SherDot2 0.25 MPMX19_00203 Ribosomal RNA large subunit methyltransferase I 0.50 MPMX19_05710 Uric acid transporter UacT low > 112
Methanococcus maripaludis S2 0.20 MMP_RS06735 class I SAM-dependent rRNA methyltransferase 0.22 MMP_RS03570 uracil-xanthine permease family protein low > 25
Methanococcus maripaludis JJ 0.20 MMJJ_RS07620 class I SAM-dependent rRNA methyltransferase 0.22 MMJJ_RS01485 uracil-xanthine permease family protein low > 28

Not shown: 39 genomes with orthologs for ECD_00971 only; 3 genomes with orthologs for ECD_02720 only