| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_01084 | | DUF177 family protein | 1.0 | ECD_02591 | | RNA polymerase, sigma S (sigma 38) factor | 0.72 | 34 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_19290 | yceD | 23S rRNA accumulation protein YceD | 1.00 | BNILDI_10860 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_22960 | yceD | 23S rRNA accumulation protein YceD | 1.00 | MCAODC_11020 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
| Escherichia fergusonii Becca | 1.00 | EFB2_02887 | | Large ribosomal RNA subunit accumulation protein YceD | 1.00 | EFB2_01169 | | RNA polymerase sigma factor RpoS | low | > 86 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_03600 | yceD | 23S rRNA accumulation protein YceD | 0.92 | OKFHMN_20495 | rpoS | RNA polymerase sigma factor RpoS | low | > 80 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_24230 | yceD | 23S rRNA accumulation protein YceD | 1.00 | NIAGMN_18265 | rpoS | RNA polymerase sigma factor RpoS | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_07260 | yceD | 23S rRNA accumulation protein YceD | 1.00 | JDDGAC_24160 | rpoS | RNA polymerase sigma factor RpoS | low | > 86 |
| Escherichia coli BW25113 | 1.00 | b1088 | yceD | hypothetical protein (NCBI) | 1.00 | b2741 | rpoS | RNA polymerase sigma factor (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_23880 | yceD | 23S rRNA accumulation protein YceD | 1.00 | HEPCGN_19675 | rpoS | RNA polymerase sigma factor RpoS | low | > 87 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_21130 | yceD | 23S rRNA accumulation protein YceD | 1.00 | NOLOHH_12310 | rpoS | RNA polymerase sigma factor RpoS | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_02578 | | Large ribosomal RNA subunit accumulation protein YceD | 1.00 | OHPLBJKB_00992 | | RNA polymerase sigma factor RpoS | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.97 | GFF3370 | | COG1399 protein, clustered with ribosomal protein L32p | 0.99 | GFF4788 | | RNA polymerase sigma factor RpoS | low | > 78 |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_1841 | | Predicted metal-binding, possibly nucleic acid-binding protein | 0.99 | EX28DRAFT_2837 | | RNA polymerase, sigma 38 subunit, RpoS | low | > 76 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_01768 | | Large ribosomal RNA subunit accumulation protein YceD | 0.99 | MPMX20_03627 | | RNA polymerase sigma factor RpoS | low | > 85 |
| Klebsiella michiganensis M5al | 0.87 | BWI76_RS11065 | | hypothetical protein | 0.99 | BWI76_RS22645 | | RNA polymerase sigma factor RpoS | — | — |
| Rahnella sp. WP5 | 0.85 | EX31_RS24410 | | 23S rRNA accumulation protein YceD | 0.92 | EX31_RS07825 | | RNA polymerase sigma factor RpoS | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.84 | LU632_RS14845 | yceD | 23S rRNA accumulation protein YceD | 0.94 | LU632_RS06480 | rpoS | RNA polymerase sigma factor RpoS | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.84 | HER17_RS08625 | | 23S rRNA accumulation protein YceD | 0.92 | HER17_RS04350 | | RNA polymerase sigma factor RpoS | low | > 75 |
| Dickeya dadantii 3937 | 0.84 | DDA3937_RS13145 | | 23S rRNA accumulation protein YceD | 0.93 | DDA3937_RS16875 | | RNA polymerase sigma factor RpoS | — | — |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS13680 | | 23S rRNA accumulation protein YceD | 0.94 | DZA65_RS18020 | | RNA polymerase sigma factor RpoS | — | — |
| Dickeya dianthicola 67-19 | 0.82 | HGI48_RS13210 | | 23S rRNA accumulation protein YceD | 0.93 | HGI48_RS16945 | | RNA polymerase sigma factor RpoS | low | > 71 |
| Pantoea sp. MT58 | 0.79 | IAI47_12095 | | 23S rRNA accumulation protein YceD | 0.95 | IAI47_04235 | | RNA polymerase sigma factor RpoS | — | — |
| Serratia liquefaciens MT49 | 0.73 | IAI46_09765 | | 23S rRNA accumulation protein YceD | 0.95 | IAI46_03790 | | RNA polymerase sigma factor RpoS | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_10120 | | 23S rRNA accumulation protein YceD | 0.71 | CSW01_02835 | | RNA polymerase sigma factor RpoS | — | — |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_01728 | | hypothetical protein | 0.71 | MIT1002_00625 | | RNA polymerase sigma factor RpoS | — | — |
| Shewanella loihica PV-4 | 0.44 | Shew_1598 | | hypothetical protein (RefSeq) | 0.72 | Shew_1213 | | RpoD family RNA polymerase sigma factor (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.44 | SO2781 | | conserved hypothetical protein (NCBI ptt file) | 0.69 | SO3432 | rpoS | RNA polymerase sigma-38 factor (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.44 | Sama_1985 | | hypothetical protein (RefSeq) | 0.70 | Sama_1044 | | RNA polymerase sigma-38 factor (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_2563 | | hypothetical protein (RefSeq) | 0.69 | Shewana3_1124 | | RNA polymerase, sigma 38 subunit, RpoS (RefSeq) | — | — |
| Pseudomonas stutzeri RCH2 | 0.27 | Psest_1684 | | Predicted metal-binding, possibly nucleic acid-binding protein | 0.63 | Psest_2806 | | RNA polymerase sigma factor RpoS | — | — |
| Marinobacter adhaerens HP15 | 0.25 | HP15_2217 | | protein containing DUF177 | 0.64 | HP15_1283 | | RNA polymerase, sigma 70 subunit, RpoD family | — | — |
| Pseudomonas sp. RS175 | 0.22 | PFR28_03014 | | Large ribosomal RNA subunit accumulation protein YceD | 0.64 | PFR28_00427 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas putida KT2440 | 0.19 | PP_1910 | | conserved protein of unknown function | 0.64 | PP_1623 | | RNA polymerase, sigma S (sigma 38) factor | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.18 | PFLU_RS23075 | | hypothetical protein | 0.64 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas fluorescens SBW25 | 0.18 | PFLU_RS23075 | | hypothetical protein | 0.64 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | low | > 109 |
| Pseudomonas simiae WCS417 | 0.17 | PS417_21460 | | metal-binding protein | 0.64 | PS417_06365 | | RNA polymerase sigma factor | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.17 | Pf1N1B4_455 | | COG1399 protein, clustered with ribosomal protein L32p | 0.64 | Pf1N1B4_3115 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.17 | AO353_01385 | | metal-binding protein | 0.64 | AO353_16615 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.17 | PfGW456L13_2101 | | COG1399 protein, clustered with ribosomal protein L32p | 0.64 | PfGW456L13_4674 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.16 | AO356_20145 | | metal-binding protein | 0.64 | AO356_05885 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.16 | Pf6N2E2_5948 | | COG1399 protein, clustered with ribosomal protein L32p | 0.64 | Pf6N2E2_3037 | | RNA polymerase sigma factor RpoS | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.16 | Psyr_1643 | | Protein of unknown function DUF177 | 0.64 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.16 | Psyr_1643 | | Protein of unknown function DUF177 | 0.64 | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | — | — |
| Dechlorosoma suillum PS | 0.16 | Dsui_2443 | | putative metal-binding protein, possibly nucleic-acid binding protein | 0.46 | Dsui_1971 | | RNA polymerase sigma factor RpoS | low | > 51 |
| Herbaspirillum seropedicae SmR1 | 0.15 | HSERO_RS09580 | | DNA-binding protein | 0.45 | HSERO_RS14830 | | RNA polymerase sigma factor RpoS | — | — |
Not shown: 7 genomes with orthologs for ECD_01084 only; 10 genomes with orthologs for ECD_02591 only