Conservation of cofitness between ECD_02445 and ECD_02523 in Escherichia coli BL21

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02445 regulatory protein P-II for glutamine synthetase 1.0 ECD_02523 tributyltin-inducible repressor of ygaVP 0.58 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 1.00 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19270 glnB nitrogen regulatory protein P-II 0.98 NIAGMN_18650 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC98 1.00 JDDGAC_25165 glnB nitrogen regulatory protein P-II 0.98 JDDGAC_24545 ygaV putative HTH-type transcriptional regulator YgaV low > 86
Escherichia fergusonii Becca 1.00 EFB2_01343 Nitrogen regulatory protein P-II 1 0.99 EFB2_01263 putative HTH-type transcriptional regulator YgaV low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.00 GFF2454 Nitrogen regulatory protein P-II 0.90 GFF1572 Transcriptional regulator, ArsR family low > 78
Escherichia coli ECOR38 1.00 HEPCGN_20645 glnB nitrogen regulatory protein P-II 1.00 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli ECOR27 1.00 NOLOHH_13175 glnB nitrogen regulatory protein P-II 1.00 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV 0.50 61
Escherichia coli BW25113 1.00 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) 1.00 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_12030 glnB nitrogen regulatory protein P-II 0.98 MCAODC_11405 ygaV putative HTH-type transcriptional regulator YgaV low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14450 nitrogen regulatory protein P-II 0.96 ECOLIN_RS14870 metalloregulator ArsR/SmtB family transcription factor — —
Escherichia coli ECRC99 1.00 KEDOAH_06720 glnB nitrogen regulatory protein P-II 0.98 KEDOAH_07255 ygaV putative HTH-type transcriptional regulator YgaV — —
Escherichia coli ECRC100 1.00 OKFHMN_21500 glnB nitrogen regulatory protein P-II 0.98 OKFHMN_20885 ygaV putative HTH-type transcriptional regulator YgaV low > 80
Escherichia coli ECRC62 1.00 BNILDI_11975 glnB nitrogen regulatory protein P-II 1.00 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV low > 75
Enterobacter sp. TBS_079 0.99 MPMX20_03422 Nitrogen regulatory protein P-II 0.80 MPMX20_03547 putative HTH-type transcriptional regulator YgaV low > 85
Enterobacter asburiae PDN3 0.99 EX28DRAFT_0097 nitrogen regulatory protein P-II family 0.80 EX28DRAFT_2752 Predicted transcriptional regulators low > 76
Klebsiella michiganensis M5al 0.99 BWI76_RS21245 nitrogen regulatory protein P-II 0.71 BWI76_RS21995 transcriptional regulator low > 92
Dickeya dadantii 3937 0.97 DDA3937_RS15635 nitrogen regulatory protein P-II 0.29 DDA3937_RS20270 helix-turn-helix transcriptional regulator low > 74
Dickeya dianthicola ME23 0.96 DZA65_RS16810 nitrogen regulatory protein P-II 0.30 DZA65_RS01015 helix-turn-helix transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.96 HGI48_RS15730 nitrogen regulatory protein P-II 0.30 HGI48_RS00955 helix-turn-helix transcriptional regulator low > 71
Pectobacterium carotovorum WPP14 0.95 HER17_RS05930 nitrogen regulatory protein P-II 0.42 HER17_RS03345 metalloregulator ArsR/SmtB family transcription factor low > 75
Serratia liquefaciens MT49 0.95 IAI46_19450 nitrogen regulatory protein P-II 0.33 IAI46_09640 winged helix-turn-helix transcriptional regulator low > 86
Pantoea sp. MT58 0.95 IAI47_04950 nitrogen regulatory protein P-II 0.59 IAI47_19710 helix-turn-helix transcriptional regulator low > 76
Rahnella sp. WP5 0.94 EX31_RS20610 nitrogen regulatory protein P-II 0.61 EX31_RS21725 helix-turn-helix transcriptional regulator low > 89
Vibrio cholerae E7946 ATCC 55056 0.89 CSW01_11410 nitrogen regulatory protein P-II 0.42 CSW01_17420 transcriptional regulator 0.50 4
Shewanella sp. ANA-3 0.85 Shewana3_3124 nitrogen regulatory protein P-II (RefSeq) 0.43 Shewana3_3141 ArsR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.85 SO3519 glnB-2 nitrogen regulatory protein P-II 1 (NCBI ptt file) 0.43 SO3538 hlyU transcriptional regulator HlyU (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.84 Sama_0935 nitrogen regulatory protein P-II (RefSeq) 0.44 Sama_0920 transcriptional regulator HlyU (RefSeq) low > 62
Shewanella loihica PV-4 0.83 Shew_1110 nitrogen regulatory protein P-II (RefSeq) 0.42 Shew_1095 ArsR family transcriptional regulator (RefSeq) low > 60
Hydrogenophaga sp. GW460-11-11-14-LB1 0.82 GFF4272 Nitrogen regulatory protein P-II 0.43 GFF3245 Transcriptional regulator, ArsR family low > 90
Paraburkholderia bryophila 376MFSha3.1 0.82 H281DRAFT_00219 nitrogen regulatory protein P-II family 0.33 H281DRAFT_02691 transcriptional regulator, ArsR family low > 103
Kangiella aquimarina DSM 16071 0.82 B158DRAFT_2530 nitrogen regulatory protein P-II family 0.33 B158DRAFT_0345 transcriptional regulator, ArsR family — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04300 nitrogen regulatory protein P-II 1 0.28 RR42_RS35445 ArsR family transcriptional regulator low > 128
Dechlorosoma suillum PS 0.81 Dsui_1687 nitrogen regulatory protein PII 0.32 Dsui_1272 putative transcriptional regulator low > 51
Variovorax sp. SCN45 0.80 GFF1151 Nitrogen regulatory protein P-II 0.30 GFF6927 Transcriptional regulator, ArsR family low > 127
Alteromonas macleodii MIT1002 0.79 MIT1002_02726 Nitrogen regulatory protein P-II 0.27 MIT1002_02372 Biofilm growth-associated repressor low > 70
Rhodopseudomonas palustris CGA009 0.76 TX73_015385 P-II family nitrogen regulator 0.40 TX73_005240 metalloregulator ArsR/SmtB family transcription factor — —
Brevundimonas sp. GW460-12-10-14-LB2 0.74 A4249_RS05675 P-II family nitrogen regulator 0.47 A4249_RS00235 metalloregulator ArsR/SmtB family transcription factor — —
Sphingomonas koreensis DSMZ 15582 0.74 Ga0059261_3385 nitrogen regulatory protein P-II family 0.43 Ga0059261_0944 Predicted transcriptional regulators — —
Magnetospirillum magneticum AMB-1 0.74 AMB_RS03570 P-II family nitrogen regulator 0.47 AMB_RS14620 ArsR family transcriptional regulator — —
Rhizobium sp. OAE497 0.74 ABIE40_RS09340 P-II family nitrogen regulator 0.38 ABIE40_RS13515 metalloregulator ArsR/SmtB family transcription factor — —
Bosea sp. OAE506 0.73 ABIE41_RS16890 P-II family nitrogen regulator 0.31 ABIE41_RS10070 sulfite-sensing transcriptional repressor BigR — —
Sinorhizobium meliloti 1021 0.73 SMc00947 nitrogen regulatory protein PII 0.34 SMa1056 transcriptional regulator — —
Castellaniella sp019104865 MT123 0.72 ABCV34_RS03065 P-II family nitrogen regulator 0.33 ABCV34_RS01430 metalloregulator ArsR/SmtB family transcription factor low > 48
Dinoroseobacter shibae DFL-12 0.69 Dshi_1838 nitrogen regulatory protein P-II (RefSeq) 0.32 Dshi_2812 transcriptional regulator, ArsR family (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.69 PGA1_c29400 nitrogen regulatory protein P-II 0.28 PGA1_c12380 regulatory protein SoxR low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_21345 transcriptional regulator 0.28 CA264_11085 transcriptional regulator low > 74

Not shown: 32 genomes with orthologs for ECD_02445 only; 9 genomes with orthologs for ECD_02523 only