Conservation of cofitness between ECD_00008 and ECD_02242 in Escherichia coli BL21

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00008 transaldolase B 1.0 ECD_02242 DedA family inner membrane protein 0.51 45
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03652 Transaldolase 1.00 OHPLBJKB_01388 Protein DedA low > 73
Escherichia coli ECOR27 1.00 NOLOHH_03410 transaldolase B 1.00 NOLOHH_14310 Protein DedA low > 75
Escherichia coli ECRC100 1.00 OKFHMN_11080 transaldolase B 1.00 OKFHMN_22675 Protein DedA 0.76 20
Escherichia coli ECRC101 1.00 MCAODC_01595 transaldolase B 1.00 MCAODC_13715 Protein DedA low > 87
Escherichia coli ECRC102 1.00 NIAGMN_08930 transaldolase B 1.00 NIAGMN_20450 Protein DedA — —
Escherichia coli ECRC99 1.00 KEDOAH_17075 transaldolase B 1.00 KEDOAH_05520 Protein DedA — —
Escherichia coli ECRC62 1.00 BNILDI_08195 transaldolase B 0.92 BNILDI_13230 DedA family inner membrane protein low > 75
Escherichia coli ECRC98 1.00 JDDGAC_14675 transaldolase B 1.00 JDDGAC_26635 Protein DedA low > 86
Escherichia coli BW25113 1.00 b0008 talB transaldolase B (NCBI) 1.00 b2317 dedA conserved inner membrane protein (NCBI) 0.27 9
Escherichia coli ECOR38 1.00 HEPCGN_09085 transaldolase B 0.92 HEPCGN_21880 DedA family inner membrane protein 0.73 23
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00045 transaldolase 0.93 ECOLIN_RS13430 DedA family protein low > 55
Escherichia fergusonii Becca 1.00 EFB2_04035 Transaldolase B 0.93 EFB2_01541 Protein DedA low > 86
Klebsiella michiganensis M5al 0.96 BWI76_RS04270 transaldolase 0.92 BWI76_RS20375 membrane protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1083 Transaldolase (EC 2.2.1.2) 0.98 GFF1933 DedA protein low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00716 Transaldolase B 0.91 MPMX20_03252 Protein DedA low > 85
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3620 transaldolase 0.91 EX28DRAFT_0287 Uncharacterized membrane-associated protein low > 76
Dickeya dianthicola ME23 0.92 DZA65_RS19465 transaldolase 0.83 DZA65_RS15365 DedA family protein low > 75
Dickeya dadantii 3937 0.92 DDA3937_RS18395 transaldolase 0.85 DDA3937_RS14460 DedA family protein low > 74
Dickeya dianthicola 67-19 0.91 HGI48_RS18325 transaldolase 0.83 HGI48_RS14430 DedA family protein low > 71
Serratia liquefaciens MT49 0.91 IAI46_03055 transaldolase 0.90 IAI46_17835 DedA family protein low > 86
Pantoea sp. MT58 0.90 IAI47_16195 transaldolase 0.82 IAI47_06250 DedA family protein low > 76
Rahnella sp. WP5 0.90 EX31_RS03920 transaldolase 0.88 EX31_RS19595 DedA family protein low > 89
Erwinia tracheiphila SCR3 0.88 LU632_RS02630 tal transaldolase 0.80 LU632_RS07830 DedA family protein low > 74
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS12545 transaldolase 0.14 ABZR86_RS12835 DedA family protein low > 74
Pseudomonas fluorescens SBW25 0.61 PFLU_RS07805 transaldolase 0.53 PFLU_RS26770 DedA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS07805 transaldolase 0.53 PFLU_RS26770 DedA family protein 0.24 79
Pseudomonas simiae WCS417 0.61 PS417_07730 transaldolase 0.52 PS417_24835 hypothetical protein — —
Pseudomonas putida KT2440 0.57 PP_2168 Transaldolase 0.50 PP_0540 conserved inner membrane protein low > 96
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_00310 transaldolase 0.55 AO353_06585 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1914 transaldolase 0.51 Psyr_0626 DedA low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1914 transaldolase 0.51 Psyr_0626 DedA low > 86
Pseudomonas sp. S08-1 0.55 OH686_22740 transaldolase 0.76 OH686_14535 DedA protein low > 80
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.58 Pf6N2E2_4974 DedA protein low > 103
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS05500 transaldolase 0.63 HSERO_RS17220 membrane protein low > 78
Pseudomonas sp. RS175 0.54 PFR28_01142 Transaldolase 0.55 PFR28_03891 Protein DedA low > 88
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.54 PfGW456L13_1337 DedA protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_02175 transaldolase 0.55 AO356_15200 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.47 Pf1N1B4_2668 DedA protein low > 87
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS11000 transaldolase 0.45 ABZR87_RS00865 VTT domain-containing protein low > 80
Acidovorax sp. GW101-3H11 0.52 Ac3H11_2059 Transaldolase (EC 2.2.1.2) 0.51 Ac3H11_312 DedA protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1363 Transaldolase (EC 2.2.1.2) 0.55 GFF5484 DedA protein — —
Variovorax sp. SCN45 0.51 GFF5266 Transaldolase (EC 2.2.1.2) 0.50 GFF4801 DedA protein low > 127
Paraburkholderia graminis OAS925 0.51 ABIE53_001416 transaldolase 0.46 ABIE53_000878 membrane-associated protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00286 transaldolase 0.46 H281DRAFT_04713 membrane-associated protein low > 103
Variovorax sp. OAS795 0.50 ABID97_RS07095 transaldolase 0.51 ABID97_RS20305 DedA family protein — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS24595 transaldolase 0.43 QEN71_RS26430 DedA family protein low > 153
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS06045 transaldolase 0.46 BPHYT_RS03655 membrane protein low > 109
Castellaniella sp019104865 MT123 0.49 ABCV34_RS15500 transaldolase 0.43 ABCV34_RS08780 VTT domain-containing protein low > 48
Acinetobacter radioresistens SK82 0.47 MPMX26_01753 Transaldolase 0.55 MPMX26_00073 Protein DedA low > 36

Not shown: 12 genomes with orthologs for ECD_00008 only; 17 genomes with orthologs for ECD_02242 only