Conservation of cofitness between ECD_00132 and ECD_00606 in Escherichia coli BL21

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00132 pantothenate synthetase 1.0 ECD_00606 ribosomal silencing factor 0.38 36
Escherichia coli BW25113 1.00 b0133 panC pantoate--beta-alanine ligase (NCBI) 1.00 b0637 ybeB orf, hypothetical protein (VIMSS) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03528 Pantothenate synthetase 1.00 OHPLBJKB_03069 Ribosomal silencing factor RsfS low > 73
Escherichia coli ECRC62 0.99 BNILDI_08920 panC pantoate--beta-alanine ligase 0.99 BNILDI_21740 rsfS ribosome silencing factor low > 75
Escherichia coli ECOR27 0.99 NOLOHH_02750 panC pantoate--beta-alanine ligase 0.99 NOLOHH_23730 rsfS ribosome silencing factor low > 75
Escherichia coli ECRC102 0.99 NIAGMN_08255 panC pantoate--beta-alanine ligase 0.99 NIAGMN_05410 rsfS ribosome silencing factor — —
Escherichia coli ECRC100 0.99 OKFHMN_10405 panC pantoate--beta-alanine ligase 0.99 OKFHMN_07355 rsfS ribosome silencing factor low > 80
Escherichia coli ECRC98 0.99 JDDGAC_14000 panC pantoate--beta-alanine ligase 0.99 JDDGAC_11000 rsfS ribosome silencing factor low > 86
Escherichia coli ECRC99 0.99 KEDOAH_17750 panC pantoate--beta-alanine ligase 0.99 KEDOAH_20615 rsfS ribosome silencing factor — —
Escherichia coli ECRC101 0.99 MCAODC_00920 panC pantoate--beta-alanine ligase 0.99 MCAODC_26570 rsfS ribosome silencing factor low > 87
Escherichia fergusonii Becca 0.99 EFB2_03911 Pantothenate synthetase 1.00 EFB2_03455 Ribosomal silencing factor RsfS low > 86
Escherichia coli ECOR38 0.98 HEPCGN_08380 panC pantoate--beta-alanine ligase 0.99 HEPCGN_00920 rsfS ribosome silencing factor low > 87
Klebsiella michiganensis M5al 0.89 BWI76_RS04990 pantoate--beta-alanine ligase 0.95 BWI76_RS08045 ribosome silencing factor RsfS — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.98 GFF4550 Iojap protein low > 78
Enterobacter sp. TBS_079 0.84 MPMX20_00826 Pantothenate synthetase 0.94 MPMX20_01296 Ribosomal silencing factor RsfS low > 85
Serratia liquefaciens MT49 0.76 IAI46_21245 pantoate--beta-alanine ligase 0.87 IAI46_05940 ribosome silencing factor — —
Pectobacterium carotovorum WPP14 0.74 HER17_RS05555 pantoate--beta-alanine ligase 0.89 HER17_RS15235 ribosome silencing factor low > 75
Pantoea sp. MT58 0.73 IAI47_15660 pantoate--beta-alanine ligase 0.88 IAI47_14015 ribosome silencing factor low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS20105 panC pantoate--beta-alanine ligase 0.83 LU632_RS16365 rsfS ribosome silencing factor low > 74
Rahnella sp. WP5 0.73 EX31_RS03285 pantoate--beta-alanine ligase 0.83 EX31_RS23130 ribosome silencing factor low > 89
Dickeya dianthicola ME23 0.70 DZA65_RS17160 pantoate--beta-alanine ligase 0.91 DZA65_RS06570 ribosome silencing factor low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS15960 pantoate--beta-alanine ligase 0.93 DDA3937_RS06180 ribosome silencing factor low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS16075 pantoate--beta-alanine ligase 0.91 HGI48_RS06225 ribosome silencing factor low > 71
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_03130 pantoate--beta-alanine ligase 0.69 CSW01_04870 ribosome silencing factor — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0827 pantothenate synthetase 0.49 Psyr_4367 Iojap-related protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0827 pantothenate synthetase 0.49 Psyr_4367 Iojap-related protein low > 86
Pseudomonas sp. S08-1 0.53 OH686_17240 pantoate--beta-alanine ligase 0.53 OH686_09330 ribosome silencing factor — —
Pseudomonas stutzeri RCH2 0.52 Psest_0995 pantoate--beta-alanine ligase 0.52 Psest_0510 iojap-like ribosome-associated protein — —
Marinobacter adhaerens HP15 0.50 HP15_323 pantothenate synthetase 0.54 HP15_603 Iojap-related protein — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0062 pantoate--beta-alanine ligase 0.57 B158DRAFT_0086 iojap-like ribosome-associated protein — —
Shewanella amazonensis SB2B 0.48 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) 0.59 Sama_2586 iojap domain-containing protein (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) 0.64 SO1170 iojap domain protein (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.48 MIT1002_03695 Pantothenate synthetase 0.65 MIT1002_01853 Ribosomal silencing factor RsfS — —
Shewanella loihica PV-4 0.47 Shew_3134 pantoate--beta-alanine ligase (RefSeq) 0.60 Shew_2933 iojap-like protein (RefSeq) — —
Shewanella sp. ANA-3 0.47 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) 0.64 Shewana3_0997 iojap-like protein (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.43 TX73_016310 pantoate--beta-alanine ligase 0.45 TX73_000865 ribosome silencing factor — —
Magnetospirillum magneticum AMB-1 0.41 AMB_RS22115 pantoate--beta-alanine ligase 0.42 AMB_RS23800 ribosome silencing factor — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_1527 pantoate--beta-alanine ligase 0.33 Echvi_2428 iojap-like ribosome-associated protein — —
Phocaeicola vulgatus CL09T03C04 0.40 HMPREF1058_RS18260 pantoate--beta-alanine ligase 0.31 HMPREF1058_RS14110 ribosome silencing factor — —
Dinoroseobacter shibae DFL-12 0.40 Dshi_2952 pantoate--beta-alanine ligase (RefSeq) 0.42 Dshi_0087 iojap-like protein (RefSeq) — —
Bacteroides ovatus ATCC 8483 0.40 BACOVA_05108 pantoate--beta-alanine ligase 0.31 BACOVA_04827 iojap-like protein — —
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS14555 pantoate--beta-alanine ligase 0.30 ABI39_RS09760 ribosome silencing factor — —
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS06090 pantoate--beta-alanine ligase 0.33 HMPREF1181_RS09150 ribosome silencing factor — —
Dechlorosoma suillum PS 0.39 Dsui_1470 pantoate--beta-alanine ligase 0.45 Dsui_0452 iojap-like ribosome-associated protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_17615 pantoate--beta-alanine ligase 0.30 CA264_20060 ribosome silencing factor RsfS — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS09715 pantoate--beta-alanine ligase 0.43 AZOBR_RS04065 ribosome-associated protein IOJAP low > 97
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS14680 pantoate--beta-alanine ligase 0.35 HMPREF1078_RS16245 ribosome silencing factor low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS18500 pantoate--beta-alanine ligase 0.31 ABZR88_RS20165 ribosome silencing factor — —
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS22700 pantoate--beta-alanine ligase 0.36 CA265_RS21000 ribosome silencing factor — —

Not shown: 49 genomes with orthologs for ECD_00132 only; 1 genomes with orthologs for ECD_00606 only