Conservation of cofitness between ECD_01571 and ECD_00263 in Escherichia coli BL21

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01571 pyridine nucleotide transhydrogenase, beta subunit 1.0 ECD_00263 ferridoxin-like LutB family protein; putative electron transport chain YkgEFG component 0.43 13
Escherichia coli ECRC101 1.00 MCAODC_17715 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 MCAODC_28325 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein — —
Escherichia coli ECRC102 1.00 NIAGMN_00380 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 NIAGMN_07165 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein — —
Escherichia coli ECRC99 1.00 KEDOAH_00410 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 KEDOAH_18865 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein — —
Escherichia coli BW25113 1.00 b1602 pntB pyridine nucleotide transhydrogenase (NCBI) 1.00 b0307 ykgF predicted amino acid dehydrogenase with NAD(P)-binding domain and ferridoxin-like domain (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_02390 NAD(P) transhydrogenase subunit beta 0.99 EFB2_03733 Lactate utilization protein B low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02124 NAD(P) transhydrogenase subunit beta 0.99 OHPLBJKB_03375 Lactate utilization protein B low > 73
Escherichia coli ECOR27 1.00 NOLOHH_18200 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.99 NOLOHH_01915 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein — —
Escherichia coli ECRC98 1.00 JDDGAC_02285 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 JDDGAC_12750 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS08950 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 ECOLIN_RS02005 LutB/LldF family L-lactate oxidation iron-sulfur protein low > 52
Escherichia coli ECOR38 1.00 HEPCGN_06070 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.99 HEPCGN_07625 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein low > 85
Escherichia coli ECRC101 1.00 OKFHMN_27695 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 1.00 OKFHMN_09100 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein — —
Escherichia coli ECRC62 1.00 BNILDI_16990 pntB Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.99 BNILDI_00040 ykgF LutB/LldF family L-lactate oxidation iron-sulfur protein — —
Dickeya dadantii 3937 0.85 DDA3937_RS10960 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.86 DDA3937_RS12260 iron-sulfur cluster-binding protein low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS10910 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.85 HGI48_RS12350 iron-sulfur cluster-binding protein low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS11370 Re/Si-specific NAD(P)(+) transhydrogenase subunit beta 0.85 DZA65_RS12790 iron-sulfur cluster-binding protein low > 75
Shewanella oneidensis MR-1 0.81 SO3741 pntB NAD(P) transhydrogenase, beta subunit (NCBI ptt file) 0.30 SO1519 iron-sulfur cluster-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_0853 pntB pyridine nucleotide transhydrogenase (RefSeq) 0.30 Shewana3_2907 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.79 Sama_2841 pntB pyridine nucleotide transhydrogenase (RefSeq) 0.32 Sama_2442 iron-sulfur cluster-binding protein (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.64 AMB_RS14195 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.31 AMB_RS20890 iron-sulfur cluster-binding protein low > 64
Rhodospirillum rubrum S1H 0.50 Rru_A2181 NAD(P) transhydrogenase, beta subunit (NCBI) 0.35 Rru_A3605 Iron-sulfur cluster binding protein (NCBI) low > 58
Azospirillum sp. SherDot2 0.49 MPMX19_01276 NAD(P) transhydrogenase subunit beta 0.34 MPMX19_06094 Lactate utilization protein B low > 112
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_11080 NAD synthetase 0.36 AO353_05710 (Fe-S)-binding protein 0.38 7
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_10870 NAD synthetase 0.36 AO356_07560 (Fe-S)-binding protein 0.48 5
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS01355 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.38 ABZR87_RS13405 LutB/LldF family L-lactate oxidation iron-sulfur protein low > 80
Azospirillum brasilense Sp245 0.48 AZOBR_RS06435 NAD synthetase 0.38 AZOBR_RS01620 putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain low > 97
Pseudomonas sp. RS175 0.48 PFR28_04723 NAD(P) transhydrogenase subunit beta 0.35 PFR28_00061 Lactate utilization protein B 0.23 54
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1820 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.35 Pf1N1B4_1188 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF low > 87
Pseudomonas stutzeri RCH2 0.48 Psest_4205 NAD/NADP transhydrogenase beta subunit 0.36 Psest_0953 iron-sulfur cluster-binding protein low > 67
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_558 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 0.36 PfGW456L13_5116 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 0.42 2
Paraburkholderia graminis OAS925 0.48 ABIE53_000814 NAD(P) transhydrogenase subunit beta 0.36 ABIE53_002786 L-lactate dehydrogenase complex protein LldF low > 113
Ralstonia solanacearum PSI07 0.47 RPSI07_RS11515 NAD synthetase 0.39 RPSI07_RS15880 iron-sulfur cluster-binding protein low > 81
Ralstonia solanacearum UW163 0.47 UW163_RS07840 NAD(P) transhydrogenase subunit beta 0.39 UW163_RS14915 iron-sulfur cluster-binding protein — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS05785 NAD(P) transhydrogenase subunit beta 0.39 RALBFv3_RS01605 iron-sulfur cluster-binding protein low > 76
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04655 NAD(P) transhydrogenase subunit beta 0.36 H281DRAFT_00473 iron-sulfur cluster-binding protein low > 103
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS26720 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 0.36 QEN71_RS05760 lactate utilization protein B low > 153
Ralstonia solanacearum GMI1000 0.46 RS_RS13675 NAD(P) transhydrogenase subunit beta 0.39 RS_RS08115 iron-sulfur cluster-binding protein low > 80
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS03380 NAD(P) transhydrogenase subunit beta 0.35 BPHYT_RS12805 hypothetical protein low > 109
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS25230 NAD synthetase 0.39 RR42_RS07435 (Fe-S)-binding protein low > 128
Shewanella loihica PV-4 0.43 Shew_0662 NAD(P) transhydrogenase, beta subunit (RefSeq) 0.31 Shew_3005 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.60 6
Dechlorosoma suillum PS 0.32 Dsui_2937 NAD/NADP transhydrogenase beta subunit 0.40 Dsui_0126 (4Fe-4S) cluster-containing protein low > 51

Not shown: 44 genomes with orthologs for ECD_01571 only; 12 genomes with orthologs for ECD_00263 only