Conservation of cofitness between DZA65_RS20275 and DZA65_RS21335 in Dickeya dianthicola ME23

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS20275 homoserine O-succinyltransferase 1.0 DZA65_RS21335 dihydroxy-acid dehydratase 0.94 7
Dickeya dianthicola 67-19 1.00 HGI48_RS19155 homoserine O-succinyltransferase 0.99 HGI48_RS20295 dihydroxy-acid dehydratase 0.81 39
Dickeya dadantii 3937 0.98 DDA3937_RS19065 homoserine O-succinyltransferase 0.98 DDA3937_RS20155 dihydroxy-acid dehydratase 0.87 27
Pectobacterium carotovorum WPP14 0.91 HER17_RS02285 homoserine O-succinyltransferase 0.91 HER17_RS01075 dihydroxy-acid dehydratase 0.98 9
Serratia liquefaciens MT49 0.90 IAI46_23200 homoserine O-succinyltransferase 0.89 IAI46_24345 dihydroxy-acid dehydratase 0.47 22
Rahnella sp. WP5 0.87 EX31_RS11735 homoserine O-succinyltransferase 0.85 EX31_RS15005 dihydroxy-acid dehydratase 0.99 6
Erwinia tracheiphila SCR3 0.84 LU632_RS22410 metA homoserine O-succinyltransferase 0.87 LU632_RS24400 ilvD dihydroxy-acid dehydratase 0.94 4
Escherichia fergusonii Becca 0.83 EFB2_04597 Homoserine O-succinyltransferase 0.91 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli Nissle 1917 0.83 ECOLIN_RS25515 homoserine O-succinyltransferase 0.91 ECOLIN_RS21665 dihydroxy-acid dehydratase — —
Escherichia coli ECOR27 0.83 NOLOHH_05420 metA homoserine O-succinyltransferase 0.91 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.95 15
Escherichia coli ECRC62 0.83 BNILDI_06100 metA homoserine O-succinyltransferase 0.91 BNILDI_04750 ilvD dihydroxy-acid dehydratase 0.94 28
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04037 Homoserine O-succinyltransferase 0.91 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli ECOR38 0.83 HEPCGN_11915 metA homoserine O-succinyltransferase 0.91 HEPCGN_13350 ilvD dihydroxy-acid dehydratase 0.96 30
Escherichia coli ECRC102 0.83 NIAGMN_11025 metA homoserine O-succinyltransferase 0.91 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC100 0.83 OKFHMN_13275 metA homoserine O-succinyltransferase 0.91 OKFHMN_14640 ilvD dihydroxy-acid dehydratase 0.95 23
Escherichia coli ECRC98 0.83 JDDGAC_16900 metA homoserine O-succinyltransferase 0.91 JDDGAC_18260 ilvD dihydroxy-acid dehydratase 0.98 3
Escherichia coli ECRC99 0.83 KEDOAH_14885 metA homoserine O-succinyltransferase 0.91 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli ECRC101 0.83 MCAODC_03775 metA homoserine O-succinyltransferase 0.91 MCAODC_05145 ilvD dihydroxy-acid dehydratase 0.97 7
Escherichia coli BW25113 0.83 b4013 metA homoserine O-succinyltransferase (NCBI) 0.91 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.86 17
Escherichia coli BL21 0.83 ECD_03885 homoserine O-transsuccinylase 0.91 ECD_03649 dihydroxyacid dehydratase 0.75 10
Pantoea sp. MT58 0.83 IAI47_18015 homoserine O-succinyltransferase 0.88 IAI47_01035 dihydroxy-acid dehydratase 0.97 11
Klebsiella michiganensis M5al 0.83 BWI76_RS01655 homoserine O-succinyltransferase 0.90 BWI76_RS00975 dihydroxy-acid dehydratase 0.90 18
Enterobacter sp. TBS_079 0.83 MPMX20_00230 Homoserine O-succinyltransferase 0.90 MPMX20_04499 Dihydroxy-acid dehydratase 0.95 2
Enterobacter asburiae PDN3 0.83 EX28DRAFT_4331 homoserine O-succinyltransferase (EC 2.3.1.46) 0.90 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.97 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF1350 Homoserine O-succinyltransferase (EC 2.3.1.46) 0.90 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_08100 homoserine O-succinyltransferase 0.83 CSW01_00140 dihydroxy-acid dehydratase low > 62
Shewanella amazonensis SB2B 0.58 Sama_1374 homoserine O-succinyltransferase (RefSeq) 0.77 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.99 3
Shewanella loihica PV-4 0.58 Shew_2551 homoserine O-succinyltransferase (RefSeq) 0.79 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.92 22
Shewanella sp. ANA-3 0.58 Shewana3_2772 homoserine O-succinyltransferase (RefSeq) 0.80 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.95 7
Shewanella oneidensis MR-1 0.58 SO1676 metA homoserine O-succinyltransferase (NCBI ptt file) 0.79 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.98 3
Alteromonas macleodii MIT1002 0.56 MIT1002_01112 Homoserine O-succinyltransferase 0.77 MIT1002_04041 Dihydroxy-acid dehydratase 0.96 27
Bacteroides stercoris CC31F 0.53 HMPREF1181_RS00105 homoserine O-succinyltransferase 0.63 HMPREF1181_RS08335 dihydroxy-acid dehydratase low > 56
Bacteroides ovatus ATCC 8483 0.52 BACOVA_03007 homoserine O-succinyltransferase 0.61 BACOVA_03302 dihydroxy-acid dehydratase low > 94
Bacteroides thetaiotaomicron VPI-5482 0.51 BT2413 homoserine O-succinyltransferase (NCBI ptt file) 0.61 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS14680 homoserine O-succinyltransferase 0.62 HMPREF1058_RS16815 dihydroxy-acid dehydratase low > 67
Phocaeicola dorei CL03T12C01 0.50 ABI39_RS10360 homoserine O-succinyltransferase 0.63 ABI39_RS12715 dihydroxy-acid dehydratase low > 72
Parabacteroides merdae CL09T00C40 0.48 HMPREF1078_RS10000 homoserine O-succinyltransferase 0.64 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Synechococcus elongatus PCC 7942 0.44 Synpcc7942_0371 metA homoserine O-succinyltransferase 0.74 Synpcc7942_0626 ilvD dihydroxy-acid dehydratase — —
Agrobacterium fabrum C58 0.43 Atu2718 homoserine O-succinyltransferase 0.72 Atu1918 dihydroxy-acid dehydratase — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c14560 homoserine O-succinyltransferase MetA 0.69 PGA1_c29490 dihydroxy-acid dehydratase LivD 0.75 15
Rhizobium sp. OAE497 0.42 ABIE40_RS18590 homoserine O-succinyltransferase 0.74 ABIE40_RS08005 dihydroxy-acid dehydratase 0.85 75
Sinorhizobium meliloti 1021 0.42 SMc03797 homoserine O-succinyltransferase 0.73 SMc04045 dihydroxy-acid dehydratase 0.97 8
Bifidobacterium breve UCC2003 0.40 BBR_RS11990 homoserine O-succinyltransferase 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Dinoroseobacter shibae DFL-12 0.40 Dshi_1593 Homoserine O-succinyltransferase (RefSeq) 0.31 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS14010 homoserine O-succinyltransferase 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase low > 97
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS42530 homoserine O-succinyltransferase 0.73 QEN71_RS21095 dihydroxy-acid dehydratase low > 153

Not shown: 0 genomes with orthologs for DZA65_RS20275 only; 56 genomes with orthologs for DZA65_RS21335 only