| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_05685 | | FAD-dependent oxidoreductase | 1.0 | CSW01_18815 | | AraC family transcriptional regulator | 0.50 | 18 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_1169 | | amine oxidase (RefSeq) | 0.55 | Shewana3_0925 | | AraC family transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.57 | SO3381 | | conserved hypothetical protein (NCBI ptt file) | 0.54 | SO1092 | | transcriptional regulator, AraC/XylS family (NCBI ptt file) | low | > 76 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_0958 | | amine oxidase, flavin-containing | 0.24 | Psyr_0649 | | transcriptional regulator, AraC family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_0958 | | amine oxidase, flavin-containing | 0.24 | Psyr_0649 | | transcriptional regulator, AraC family | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.55 | Psest_2400 | | Predicted NAD/FAD-binding protein | 0.25 | Psest_4208 | | AraC-type DNA-binding domain-containing proteins | low | > 67 |
| Rahnella sp. WP5 | 0.54 | EX31_RS23985 | | FAD-dependent oxidoreductase | 0.46 | EX31_RS19615 | | helix-turn-helix transcriptional regulator | low | > 89 |
| Pseudomonas orientalis W4I3 | 0.54 | QF045_RS06630 | | FAD-dependent oxidoreductase | 0.39 | QF045_RS05795 | | helix-turn-helix transcriptional regulator | low | > 93 |
| Pseudomonas putida KT2440 | 0.54 | PP_2736 | | conserved protein of unknown function | 0.34 | PP_4852 | | Transcriptional regulator, AraC family | low | > 96 |
| Pseudomonas lactucae CFBP13502 | 0.54 | GEMAOFIL_00936 | | hypothetical protein | 0.29 | GEMAOFIL_03519 | | HTH-type transcriptional regulator NimR | low | > 96 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_1373 | | Predicted NAD/FAD-binding protein | 0.23 | EX28DRAFT_1780 | | AraC-type DNA-binding domain-containing proteins | low | > 76 |
| Pseudomonas segetis P6 | 0.54 | MPMX49_01345 | | hypothetical protein | 0.27 | MPMX49_00356 | | HTH-type transcriptional regulator NimR | low | > 75 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_1348 | | COG2907: Amine oxidase, flavin-containing | 0.34 | Pf6N2E2_475 | | Transcriptional regulator, AraC family | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS03700 | | FAD-dependent oxidoreductase | 0.39 | PFLU_RS02820 | | AraC family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS03700 | | FAD-dependent oxidoreductase | 0.39 | PFLU_RS02820 | | AraC family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_25325 | | FAD-dependent oxidoreductase | 0.34 | AO356_22960 | | AraC family transcriptional regulator | low | > 104 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_02175 | | hypothetical protein | 0.24 | MPMX20_01835 | | HTH-type transcriptional regulator NimR | low | > 85 |
| Pseudomonas sp. BP01 | 0.53 | JOY50_RS03420 | | NAD(P)/FAD-dependent oxidoreductase | 0.34 | JOY50_RS17460 | | helix-turn-helix transcriptional regulator | — | — |
| Pseudomonas sp. RS175 | 0.53 | PFR28_02036 | | hypothetical protein | 0.24 | PFR28_05241 | | HTH-type transcriptional regulator NimR | low | > 88 |
| Klebsiella pneumoniae MKP103 | 0.53 | KDGMDA_11810 | | FAD-dependent oxidoreductase | 0.23 | KDGMDA_19080 | | AraC family transcriptional regulator | low | > 95 |
| Pseudomonas sp. DMC3 | 0.52 | GFF4482 | | hypothetical protein | 0.38 | GFF3270 | | HTH-type transcriptional regulator NimR | low | > 89 |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS12575 | | FAD-dependent oxidoreductase | 0.24 | BWI76_RS11455 | | AraC family transcriptional regulator | low | > 92 |
| Erwinia amylovora T8 | 0.52 | OLJFJH_16590 | | FAD-dependent oxidoreductase | 0.45 | OLJFJH_11225 | | AraC family transcriptional regulator | low | > 58 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_03650 | | FAD-dependent oxidoreductase | 0.39 | PS417_02760 | | AraC family transcriptional regulator | low | > 88 |
| Ralstonia sp. UNC404CL21Col | 0.42 | ABZR87_RS21065 | | FAD-dependent oxidoreductase | 0.35 | ABZR87_RS23255 | | helix-turn-helix transcriptional regulator | low | > 80 |
| Agrobacterium fabrum C58 | 0.40 | Atu1977 | | amine oxidase, flavin-containing | 0.33 | Atu5338 | | AraC family transcriptional regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_01466 | | Predicted NAD/FAD-binding protein | 0.22 | H281DRAFT_06000 | | transcriptional regulator, AraC family | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS05275 | | NADH-ubiquinone oxidoreductase subunit 6 | 0.23 | HSERO_RS21185 | | transcriptional regulator | low | > 78 |
| Variovorax sp. SCN45 | 0.39 | GFF5437 | | Amine oxidase, flavin-containing | 0.38 | GFF4545 | | Transcriptional regulator, AraC family | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS29225 | | NADH-ubiquinone oxidoreductase subunit 6 | 0.36 | RR42_RS35075 | | AraC family transcriptional regulator | low | > 128 |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A0723 | | Amine oxidase (NCBI) | 0.24 | Rru_A2490 | | Transcriptional Regulator, AraC family (NCBI) | low | > 58 |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_05741 | | hypothetical protein | 0.22 | MPMX19_04533 | | HTH-type transcriptional regulator NimR | low | > 112 |
| Variovorax sp. OAS795 | 0.35 | ABID97_RS21860 | | FAD-dependent oxidoreductase | 0.20 | ABID97_RS28450 | | helix-turn-helix transcriptional regulator | low | > 91 |
| Acinetobacter baumannii LAC-4 | 0.34 | RR41_RS06580 | | FAD-dependent oxidoreductase | 0.33 | RR41_RS02400 | | helix-turn-helix transcriptional regulator | 0.38 | 24 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_013295 | | NAD/FAD-binding protein | 0.23 | TX73_016840 | | helix-turn-helix transcriptional regulator | low | > 86 |
| Mycobacterium tuberculosis H37Rv | 0.31 | Rv0449c | | Conserved hypothetical protein | 0.18 | Rv3833 | | Transcriptional regulatory protein (probably AraC-family) | low | > 58 |
| Acinetobacter radioresistens SK82 | 0.09 | MPMX26_02881 | | hypothetical protein | 0.23 | MPMX26_00111 | | HTH-type transcriptional regulator NimR | — | — |
Not shown: 27 genomes with orthologs for CSW01_05685 only; 34 genomes with orthologs for CSW01_18815 only