Conservation of cofitness between CSW01_00685 and CSW01_13285 in Vibrio cholerae E7946 ATCC 55056

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00685 lysophospholipase 1.0 CSW01_13285 ribulose-phosphate 3-epimerase 0.82 6
Shewanella sp. ANA-3 0.33 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) 0.78 Shewana3_3888 ribulose-5-phosphate 3-epimerase (RefSeq) — —
Shewanella loihica PV-4 0.33 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.77 Shew_0219 ribulose-phosphate 3-epimerase (RefSeq) — —
Pectobacterium carotovorum WPP14 0.32 HER17_RS01410 lysophospholipase L2 0.76 HER17_RS01795 ribulose-phosphate 3-epimerase low > 75
Shewanella oneidensis MR-1 0.32 SO4733 lypA lysophospholipase L2 (NCBI ptt file) 0.78 SO0292 rpe ribulose-phosphate 3-epimerase (NCBI ptt file) — —
Erwinia amylovora T8 0.32 OLJFJH_06455 lysophospholipase L2 0.76 OLJFJH_04075 ribulose-phosphate 3-epimerase — —
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS15320 lysophospholipase L2 0.76 PagCFBP13505_RS21685 ribulose-phosphate 3-epimerase — —
Pantoea sp. MT58 0.31 IAI47_18340 lysophospholipase L2 0.76 IAI47_01910 ribulose-phosphate 3-epimerase — —
Shewanella amazonensis SB2B 0.31 Sama_0083 alpha/beta hydrolase fold (RefSeq) 0.77 Sama_3362 ribulose-phosphate 3-epimerase (RefSeq) — —
Erwinia tracheiphila HP pepo 2.2 0.31 IJEDHG_08720 pldB lysophospholipase L2 0.76 IJEDHG_12050 rpe ribulose-phosphate 3-epimerase — —
Dickeya dadantii 3937 0.30 DDA3937_RS19830 lysophospholipase L2 0.75 DDA3937_RS19530 ribulose-phosphate 3-epimerase — —
Erwinia tracheiphila SCR3 0.30 LU632_RS24080 pldB lysophospholipase L2 0.76 LU632_RS22850 rpe ribulose-phosphate 3-epimerase — —
Rahnella sp. WP5 0.30 EX31_RS15225 lysophospholipase L2 0.74 EX31_RS04705 ribulose-phosphate 3-epimerase — —
Escherichia coli ECRC99 0.30 KEDOAH_13805 pldB lysophospholipase L2 0.77 KEDOAH_11010 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECOR38 0.30 HEPCGN_13045 pldB lysophospholipase L2 0.77 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase low > 88
Escherichia coli ECRC62 0.30 BNILDI_05055 pldB lysophospholipase L2 0.77 BNILDI_02600 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC100 0.30 OKFHMN_14345 pldB lysophospholipase L2 0.77 OKFHMN_17130 dam adenine-specific DNA-methyltransferase — —
Escherichia fergusonii Becca 0.30 EFB2_04812 Lysophospholipase L2 0.77 EFB2_00442 Ribulose-phosphate 3-epimerase — —
Escherichia coli Nissle 1917 0.30 ECOLIN_RS21960 lysophospholipase L2 0.77 ECOLIN_RS19345 ribulose-phosphate 3-epimerase — —
Escherichia coli ECOR27 0.30 NOLOHH_06475 pldB lysophospholipase L2 0.77 NOLOHH_08920 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC98 0.30 JDDGAC_17970 pldB lysophospholipase L2 0.77 JDDGAC_20760 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC102 0.30 NIAGMN_12100 pldB lysophospholipase L2 0.77 NIAGMN_14900 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC101 0.30 MCAODC_04850 pldB lysophospholipase L2 0.77 MCAODC_07660 dam adenine-specific DNA-methyltransferase — —
Escherichia coli BL21 0.30 ECD_03704 lysophospholipase L2 0.77 ECD_03238 D-ribulose-5-phosphate 3-epimerase low > 61
Escherichia coli BW25113 0.30 b3825 pldB lysophospholipase L(2) (NCBI) 0.77 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) low > 76
Serratia liquefaciens MT49 0.30 IAI46_00785 lysophospholipase L2 0.76 IAI46_23685 ribulose-phosphate 3-epimerase low > 87
Klebsiella michiganensis M5al 0.30 BWI76_RS01260 lysophospholipase L2 0.77 BWI76_RS26070 ribulose-phosphate 3-epimerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_04226 Lysophospholipase L2 0.77 OHPLBJKB_00317 Ribulose-phosphate 3-epimerase — —
Dickeya dianthicola ME23 0.29 DZA65_RS21030 lysophospholipase L2 0.76 DZA65_RS20745 ribulose-phosphate 3-epimerase — —
Klebsiella pneumoniae MKP103 0.29 KDGMDA_09755 lysophospholipase L2 0.78 KDGMDA_06895 ribulose-phosphate 3-epimerase — —
Dickeya dianthicola 67-19 0.29 HGI48_RS19985 lysophospholipase L2 0.76 HGI48_RS19660 ribulose-phosphate 3-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF251 Lysophospholipase L2 (EC 3.1.1.5) 0.76 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 78
Enterobacter sp. TBS_079 0.28 MPMX20_04455 Lysophospholipase L2 0.77 MPMX20_04275 Ribulose-phosphate 3-epimerase low > 85
Enterobacter asburiae PDN3 0.27 EX28DRAFT_4490 Lysophospholipase 0.78 EX28DRAFT_4156 ribulose-phosphate 3-epimerase low > 76
Alteromonas macleodii MIT1002 0.23 MIT1002_00479 lysophospholipase L2 0.74 MIT1002_00441 Ribulose-phosphate 3-epimerase — —
Phaeobacter inhibens DSM 17395 0.18 PGA1_c07480 Lysophospholipase 0.42 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe — —
Sinorhizobium meliloti 1021 0.17 SMc04041 lysophospholipase L2 protein 0.44 SMc00511 D-ribulose-5-phosphate 3-epimerase — —
Rhizobium sp. OAE497 0.17 ABIE40_RS16315 alpha/beta hydrolase 0.44 ABIE40_RS10105 ribulose-phosphate 3-epimerase — —
Xanthobacter sp. DMC5 0.16 GFF4159 Lysophospholipase L2 0.57 GFF2441 Ribulose-phosphate 3-epimerase — —
Rhodopseudomonas palustris CGA009 0.16 TX73_004575 alpha/beta hydrolase 0.39 TX73_019755 ribulose-phosphate 3-epimerase — —
Azospirillum brasilense Sp245 0.16 AZOBR_RS05105 lysophospholipase 0.45 AZOBR_RS06755 ribulose-phosphate 3-epimerase — —
Azospirillum sp. SherDot2 0.15 MPMX19_00440 Lysophospholipase L2 0.56 MPMX19_02946 Ribulose-phosphate 3-epimerase low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.15 A4249_RS12480 alpha/beta hydrolase 0.44 A4249_RS13160 ribulose-phosphate 3-epimerase — —
Sphingomonas koreensis DSMZ 15582 0.13 Ga0059261_3246 Lysophospholipase 0.46 Ga0059261_2240 ribulose-phosphate 3-epimerase — —
Ralstonia sp. UNC404CL21Col 0.10 ABZR87_RS04225 alpha/beta hydrolase 0.64 ABZR87_RS02130 ribulose-phosphate 3-epimerase — —
Herbaspirillum seropedicae SmR1 0.09 HSERO_RS16170 lysophospholipase 0.67 HSERO_RS19425 ribulose-phosphate 3-epimerase — —
Ralstonia solanacearum GMI1000 0.09 RS_RS16765 alpha/beta hydrolase 0.63 RS_RS14420 ribulose-phosphate 3-epimerase — —

Not shown: 0 genomes with orthologs for CSW01_00685 only; 76 genomes with orthologs for CSW01_13285 only