Conservation of cofitness between CSW01_03090 and CSW01_12950 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03090 rRNA (cytidine-2'-O-)-methyltransferase 1.0 CSW01_12950 adenylyl-sulfate kinase 0.70 9
Pectobacterium carotovorum WPP14 0.65 HER17_RS19860 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.60 HER17_RS04295 adenylyl-sulfate kinase low > 75
Erwinia amylovora T8 0.65 OLJFJH_02280 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.60 OLJFJH_09335 Adenylyl-sulfate kinase low > 58
Escherichia coli ECOR38 0.64 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 HEPCGN_19630 cysC Adenylyl-sulfate kinase low > 88
Escherichia coli Nissle 1917 0.64 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 ECOLIN_RS15375 adenylyl-sulfate kinase low > 55
Escherichia fergusonii Becca 0.64 EFB2_00677 Ribosomal RNA small subunit methyltransferase I 0.59 EFB2_01160 Adenylyl-sulfate kinase low > 86
Escherichia coli ECRC100 0.64 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 OKFHMN_20450 cysC Adenylyl-sulfate kinase low > 79
Escherichia coli ECRC101 0.64 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 MCAODC_10975 cysC Adenylyl-sulfate kinase low > 88
Escherichia coli BL21 0.64 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent 0.59 ECD_02600 adenosine 5'-phosphosulfate kinase low > 61
Escherichia coli BW25113 0.64 b3146 yraL predicted methyltransferase (NCBI) 0.59 b2750 cysC adenylylsulfate kinase (NCBI) low > 76
Escherichia coli ECRC102 0.64 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 NIAGMN_18220 cysC Adenylyl-sulfate kinase low > 80
Escherichia coli ECRC99 0.64 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 KEDOAH_07690 cysC Adenylyl-sulfate kinase — —
Dickeya dadantii 3937 0.64 DDA3937_RS01715 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.58 DDA3937_RS16915 adenylyl-sulfate kinase low > 74
Escherichia coli ECRC98 0.64 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 JDDGAC_24115 cysC Adenylyl-sulfate kinase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I 0.59 OHPLBJKB_00983 Adenylyl-sulfate kinase low > 74
Dickeya dianthicola 67-19 0.64 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.57 HGI48_RS16985 adenylyl-sulfate kinase low > 71
Erwinia tracheiphila SCR3 0.64 LU632_RS02230 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.57 LU632_RS06435 cysC adenylyl-sulfate kinase low > 74
Shewanella loihica PV-4 0.63 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) 0.54 Shew_1425 adenylyl-sulfate kinase (RefSeq) low > 60
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_06680 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.57 IJEDHG_17455 cysC adenylyl-sulfate kinase low > 61
Dickeya dianthicola ME23 0.63 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.58 DZA65_RS18060 adenylyl-sulfate kinase low > 75
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS11450 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.61 PagCFBP13505_RS16775 adenylyl-sulfate kinase low > 74
Escherichia coli ECOR27 0.63 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 NOLOHH_12265 cysC Adenylyl-sulfate kinase low > 76
Escherichia coli ECRC62 0.63 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.59 BNILDI_10815 cysC Adenylyl-sulfate kinase low > 75
Shewanella amazonensis SB2B 0.62 Sama_3353 hypothetical protein (RefSeq) 0.57 Sama_2888 adenylylsulfate kinase (RefSeq) low > 62
Enterobacter asburiae PDN3 0.61 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.60 EX28DRAFT_2846 adenylyl-sulfate kinase low > 76
Enterobacter sp. TBS_079 0.61 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I 0.60 MPMX20_03636 Adenylyl-sulfate kinase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF1521 rRNA small subunit methyltransferase I 0.59 GFF4798 Adenylylsulfate kinase (EC 2.7.1.25) low > 78
Rahnella sp. WP5 0.61 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.62 EX31_RS07870 adenylyl-sulfate kinase low > 89
Pantoea sp. MT58 0.61 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.61 IAI47_04190 adenylyl-sulfate kinase low > 76
Klebsiella michiganensis M5al 0.60 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase 0.60 BWI76_RS22690 adenylyl-sulfate kinase low > 92
Serratia liquefaciens MT49 0.59 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.61 IAI46_03725 adenylyl-sulfate kinase low > 86
Klebsiella pneumoniae MKP103 0.58 KDGMDA_05780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.60 KDGMDA_03265 Adenylyl-sulfate kinase low > 95
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_17110 methyltransferase 0.47 AO356_08855 adenylylsulfate kinase low > 104
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_01121 Ribosomal RNA small subunit methyltransferase I 0.43 GEMAOFIL_02147 Adenylyl-sulfate kinase low > 93
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15290 methyltransferase 0.44 AO353_12965 adenylylsulfate kinase low > 101
Pseudomonas simiae WCS417 0.53 PS417_04590 methyltransferase 0.49 PS417_20630 adenylylsulfate kinase — —
Pseudomonas sp. RS175 0.53 PFR28_03597 Ribosomal RNA small subunit methyltransferase I 0.45 PFR28_05082 Adenylyl-sulfate kinase low > 88
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_953 rRNA small subunit methyltransferase I 0.50 Pf1N1B4_334 Adenylylsulfate kinase (EC 2.7.1.25) — —
Pseudomonas sp. S08-1 0.51 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.49 OH686_14415 Adenylylsulfate kinase low > 80
Alteromonas macleodii MIT1002 0.49 MIT1002_03113 Ribosomal RNA small subunit methyltransferase I 0.55 MIT1002_01273 Adenylyl-sulfate kinase — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2109 probable S-adenosylmethionine-dependent methyltransferase, YraL family 0.57 B158DRAFT_2363 adenylylsulfate kinase (apsK) low > 40
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.45 QEN71_RS25815 adenylyl-sulfate kinase low > 153
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS01940 16S rRNA methyltransferase 0.38 BPHYT_RS08715 adenylyl-sulfate kinase low > 109
Synechocystis sp000284455 PCC 6803 0.40 SGL_RS09835 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.39 SGL_RS03840 adenylyl-sulfate kinase low > 52
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase 0.44 H281DRAFT_04809 adenylylsulfate kinase low > 103
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_0174 hypothetical protein 0.52 Synpcc7942_0939 cysC adenylylsulfate kinase — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.35 RPSI07_RS00510 adenylyl-sulfate kinase low > 81
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS04125 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.40 HMPREF1078_RS01700 adenylyl-sulfate kinase low > 61
Ralstonia solanacearum GMI1000 0.33 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.35 RS_RS17945 adenylyl-sulfate kinase low > 80
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.35 ABZR87_RS16415 adenylyl-sulfate kinase low > 80

Not shown: 53 genomes with orthologs for CSW01_03090 only; 5 genomes with orthologs for CSW01_12950 only