Conservation of cofitness between CSW01_12905 and CSW01_12035 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12905 outer membrane protein assembly factor 1.0 CSW01_12035 glutamate synthase small subunit 0.49 4
Pectobacterium carotovorum WPP14 0.38 HER17_RS03980 autotransporter assembly complex protein TamA 0.78 HER17_RS19915 glutamate synthase small subunit low > 75
Serratia liquefaciens MT49 0.38 IAI46_01770 outer membrane protein assembly factor 0.78 IAI46_22350 glutamate synthase small subunit low > 87
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3406 Outer membrane protein 0.78 EX28DRAFT_3276 glutamate synthase small subunit family protein, proteobacterial low > 76
Rahnella sp. WP5 0.37 EX31_RS08695 outer membrane protein assembly factor 0.78 EX31_RS12510 FAD-dependent oxidoreductase low > 89
Dickeya dadantii 3937 0.37 DDA3937_RS17160 outer membrane protein assembly factor 0.78 DDA3937_RS01660 FAD-dependent oxidoreductase low > 74
Klebsiella pneumoniae MKP103 0.37 KDGMDA_11250 autotransporter assembly complex protein TamA 0.77 KDGMDA_06150 Glutamate synthase [NADPH] small chain low > 94
Klebsiella pneumoniae MRSN742743 0.37 GJGHJB_04528 tamA autotransporter assembly complex protein TamA 0.77 GJGHJB_00482 gltD Glutamate synthase [NADPH] small chain low > 83
Enterobacter sp. TBS_079 0.37 MPMX20_00503 Translocation and assembly module subunit TamA 0.78 MPMX20_04127 Glutamate synthase [NADPH] small chain low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF874 Uncharacterized protein YtfM precursor 0.78 GFF2957 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 78
Erwinia tracheiphila SCR3 0.36 LU632_RS02105 autotransporter assembly complex protein TamA 0.76 LU632_RS21320 glutamate synthase small subunit low > 73
Erwinia tracheiphila HP pepo 2.2 0.36 IJEDHG_06810 Translocation and assembly module subunit TamA 0.76 IJEDHG_13700 glutamate synthase small subunit low > 61
Escherichia coli ECRC100 0.36 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 0.77 OKFHMN_17880 gltD glutamate synthase subunit GltD low > 79
Dickeya dianthicola 67-19 0.36 HGI48_RS17215 outer membrane protein assembly factor 0.78 HGI48_RS01555 glutamate synthase small subunit low > 71
Escherichia coli ECRC101 0.36 MCAODC_02515 tamA autotransporter assembly complex protein TamA 0.77 MCAODC_08400 gltD glutamate synthase subunit GltD low > 87
Escherichia coli ECOR27 0.36 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 0.77 NOLOHH_09680 gltD glutamate synthase subunit GltD low > 75
Escherichia coli ECRC99 0.36 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 0.77 KEDOAH_10270 gltD glutamate synthase subunit GltD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03813 Translocation and assembly module subunit TamA 0.77 OHPLBJKB_00487 Glutamate synthase [NADPH] small chain low > 74
Escherichia coli ECRC98 0.36 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 0.77 JDDGAC_21505 gltD glutamate synthase subunit GltD low > 87
Escherichia coli BW25113 0.36 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 0.77 b3213 gltD glutamate synthase, 4Fe-4S protein, small subunit (NCBI) low > 76
Escherichia coli ECRC62 0.36 BNILDI_07255 tamA autotransporter assembly complex protein TamA 0.77 BNILDI_01855 gltD glutamate synthase subunit GltD low > 75
Escherichia coli ECRC102 0.36 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 0.77 NIAGMN_15640 gltD glutamate synthase subunit GltD low > 80
Escherichia coli BL21 0.36 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit 0.77 ECD_03078 glutamate synthase, 4Fe-4S protein, small subunit low > 61
Klebsiella michiganensis M5al 0.36 BWI76_RS02775 outer membrane protein assembly factor 0.77 BWI76_RS25320 glutamate synthase low > 92
Escherichia coli ECOR38 0.36 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.77 HEPCGN_16755 gltD glutamate synthase subunit GltD low > 88
Dickeya dianthicola ME23 0.36 DZA65_RS18295 outer membrane protein assembly factor 0.78 DZA65_RS01630 FAD-dependent oxidoreductase low > 75
Escherichia coli Nissle 1917 0.36 ECOLIN_RS24510 autotransporter assembly complex protein TamA 0.77 ECOLIN_RS18480 glutamate synthase subunit GltD low > 55
Escherichia fergusonii Becca 0.36 EFB2_04309 Translocation and assembly module subunit TamA 0.77 EFB2_00610 Glutamate synthase [NADPH] small chain low > 86
Pseudomonas aeruginosa PA14 0.30 IKLFDK_12500 Translocation and assembly module subunit TamA 0.70 IKLFDK_28360 glutamate synthase small subunit low > 98
Pseudomonas aeruginosa MRSN321 0.30 PFGADD_02548 tamA Translocation and assembly module subunit TamA 0.70 PFGADD_05273 gltD Glutamate synthase (NADPH/NADH) small chain low > 99
Pseudomonas aeruginosa PUPa3 0.29 NPBIFN_02578 tamA Translocation and assembly module subunit TamA 0.70 NPBIFN_05349 gltD Glutamate synthase (NADPH/NADH) small chain low > 101
Pseudomonas putida KT2440 0.28 PP_2892 conserved exported protein of unknown function 0.68 PP_5075 glutamate synthase (NADPH) beta subunit low > 96
Pseudomonas sp. BP01 0.27 JOY50_RS05880 autotransporter assembly complex family protein 0.68 JOY50_RS09325 FAD-dependent oxidoreductase low > 84
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_03702 Translocation and assembly module subunit TamA 0.69 GEMAOFIL_00633 Glutamate synthase [NADPH] small chain low > 96
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2601 Uncharacterized protein YtfM precursor 0.69 PfGW456L13_271 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 87
Pseudomonas sp. DMC3 0.27 GFF1483 Translocation and assembly module subunit TamA 0.69 GFF3103 Glutamate synthase [NADPH] small chain low > 89
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3997 Uncharacterized protein YtfM precursor 0.69 Pf1N1B4_1533 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 87
Pseudomonas segetis P6 0.27 ACVTMO_RS11845 autotransporter assembly complex protein TamA 0.68 ACVTMO_RS20980 FAD-dependent oxidoreductase low > 75
Pseudomonas simiae WCS417 0.27 PS417_16970 membrane protein 0.69 PS417_02005 glutamate synthase low > 88
Pseudomonas protegens RBAN4 0.27 FABNJH_20300 tamA Translocation and assembly module subunit TamA 0.69 FABNJH_02370 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase — —
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.69 Psyr_0412 glutamate synthase (NADPH) small subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.69 Psyr_0412 glutamate synthase (NADPH) small subunit low > 86
Pseudomonas sp. SVBP6 0.27 COO64_RS24395 autotransporter assembly complex family protein 0.69 COO64_RS13090 FAD-dependent oxidoreductase low > 91
Shewanella oneidensis MR-1 0.27 SO2114 conserved hypothetical protein (NCBI ptt file) 0.69 SO1324 gltD glutamate synthase, small subunit (NCBI ptt file) low > 76
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS18920 outer membrane protein assembly factor 0.69 PFLU_RS02050 NAD(P)-binding protein low > 109
Pseudomonas stutzeri RCH2 0.27 Psest_2132 Outer membrane protein 0.69 Psest_3710 glutamate synthase small subunit family protein, proteobacterial low > 67
Pseudomonas fluorescens SBW25 0.27 PFLU_RS18920 outer membrane protein assembly factor 0.69 PFLU_RS02050 NAD(P)-binding protein low > 109
Pseudomonas sp. RS175 0.27 PFR28_02752 Translocation and assembly module subunit TamA 0.69 PFR28_05016 Glutamate synthase [NADPH] small chain low > 88
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_144 Uncharacterized protein YtfM precursor 0.69 Pf6N2E2_3751 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) low > 103
Pseudomonas orientalis W4I3 0.26 QF045_RS18645 autotransporter assembly complex family protein 0.69 QF045_RS05065 FAD-dependent oxidoreductase low > 93
Marinobacter adhaerens HP15 0.26 HP15_2341 surface antigen (D15) 0.68 HP15_483 oxidoreductase Fe-S binding subunit — —
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_01050 hypothetical protein 0.69 AO356_09370 glutamate synthase low > 104
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_27865 hypothetical protein 0.69 AO353_12520 glutamate synthase low > 101
Shewanella sp. ANA-3 0.26 Shewana3_1894 surface antigen (D15) (RefSeq) 0.69 Shewana3_3051 gltD glutamate synthase subunit beta (RefSeq) low > 73
Shewanella amazonensis SB2B 0.25 Sama_1616 hypothetical protein (RefSeq) 0.68 Sama_0856 gltD glutamate synthase subunit beta (RefSeq) low > 62

Not shown: 3 genomes with orthologs for CSW01_12905 only; 23 genomes with orthologs for CSW01_12035 only