Conservation of cofitness between CSW01_09950 and CSW01_11200 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09950 signal peptide peptidase SppA 1.0 CSW01_11200 flagellar basal-body rod protein FlgG 0.65 16
Dickeya dadantii 3937 0.46 DDA3937_RS10290 signal peptide peptidase SppA 0.54 DDA3937_RS13455 flagellar basal-body rod protein FlgG low > 74
Dickeya dianthicola 67-19 0.46 HGI48_RS10300 signal peptide peptidase SppA 0.53 HGI48_RS13500 flagellar basal-body rod protein FlgG low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS10775 signal peptide peptidase SppA 0.53 DZA65_RS13985 flagellar basal-body rod protein FlgG low > 75
Serratia liquefaciens MT49 0.45 IAI46_14325 signal peptide peptidase SppA 0.57 IAI46_15935 flagellar basal-body rod protein FlgG low > 87
Pectobacterium carotovorum WPP14 0.44 HER17_RS11105 signal peptide peptidase SppA 0.55 HER17_RS08190 flagellar basal-body rod protein FlgG low > 75
Escherichia fergusonii Becca 0.44 EFB2_02228 Protease 4 0.55 EFB2_02896 Flagellar basal-body rod protein FlgG low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS09855 signal peptide peptidase SppA 0.55 ECOLIN_RS06240 flagellar basal-body rod protein FlgG — —
Escherichia coli ECOR38 0.44 HEPCGN_05185 sppA signal peptide peptidase SppA 0.55 HEPCGN_23840 flgG flagellar basal-body rod protein FlgG low > 88
Escherichia coli ECOR27 0.43 NOLOHH_17325 sppA signal peptide peptidase SppA 0.55 NOLOHH_21180 flgG flagellar basal-body rod protein FlgG low > 76
Escherichia coli ECRC62 0.43 BNILDI_16110 sppA signal peptide peptidase SppA 0.55 BNILDI_19340 flgG flagellar basal-body rod protein FlgG low > 75
Enterobacter sp. TBS_079 0.43 MPMX20_01850 Protease 4 0.55 MPMX20_01757 Flagellar basal-body rod protein FlgG low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_01966 Protease 4 0.55 OHPLBJKB_02587 Flagellar basal-body rod protein FlgG low > 74
Escherichia coli BW25113 0.43 b1766 sppA protease IV (signal peptide peptidase) (NCBI) 0.55 b1078 flgG flagellar component of cell-distal portion of basal-body rod (NCBI) low > 76
Escherichia coli BL21 0.43 ECD_01735 protease IV (signal peptide peptidase) 0.55 ECD_01074 flagellar component of cell-distal portion of basal-body rod low > 61
Rahnella sp. WP5 0.43 EX31_RS06305 signal peptide peptidase SppA 0.55 EX31_RS11290 flagellar basal-body rod protein FlgG low > 89
Enterobacter asburiae PDN3 0.43 EX28DRAFT_1767 signal peptide peptidase SppA, 67K type 0.55 EX28DRAFT_1854 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3483 Signal peptide peptidase SppA (EC 3.4.21.-) 0.56 GFF3359 Flagellar basal-body rod protein FlgG low > 78
Shewanella sp. ANA-3 0.43 Shewana3_1964 signal peptide peptidase SppA, 67K type (RefSeq) 0.72 Shewana3_1326 flgG flagellar basal body rod protein FlgG (RefSeq) low > 73
Escherichia coli ECRC98 0.42 JDDGAC_01390 sppA signal peptide peptidase SppA 0.55 JDDGAC_07310 flgG flagellar basal-body rod protein FlgG low > 87
Escherichia coli ECRC101 0.42 MCAODC_18595 sppA signal peptide peptidase SppA 0.55 MCAODC_23010 flgG flagellar basal-body rod protein FlgG low > 87
Escherichia coli ECRC99 0.42 KEDOAH_01295 sppA signal peptide peptidase SppA 0.55 KEDOAH_24105 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC102 0.42 NIAGMN_01250 sppA signal peptide peptidase SppA 0.55 NIAGMN_24180 flgG flagellar basal-body rod protein FlgG low > 80
Escherichia coli ECRC100 0.42 OKFHMN_26815 sppA signal peptide peptidase SppA 0.55 OKFHMN_03650 flgG flagellar basal-body rod protein FlgG low > 79
Shewanella oneidensis MR-1 0.42 SO2420 sppA signal peptide peptidase SppA, 67K type (NCBI ptt file) 0.71 SO3244 flgG flagellar basal-body rod protein FlgG (NCBI ptt file) low > 76
Erwinia amylovora T8 0.42 OLJFJH_13245 signal peptide peptidase SppA 0.54 OLJFJH_10070 flagellar basal-body rod protein FlgG low > 58
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS02805 signal peptide peptidase SppA 0.51 PagCFBP13505_RS05195 flagellar basal-body rod protein FlgG low > 74
Pantoea sp. MT58 0.42 IAI47_08970 signal peptide peptidase SppA 0.51 IAI47_12140 flagellar basal-body rod protein FlgG low > 76
Erwinia tracheiphila HP pepo 2.2 0.42 IJEDHG_22640 sppA signal peptide peptidase SppA 0.54 IJEDHG_21070 flgG flagellar basal-body rod protein FlgG low > 61
Erwinia tracheiphila SCR3 0.42 LU632_RS12970 sppA signal peptide peptidase SppA 0.54 LU632_RS10420 flgG flagellar basal-body rod protein FlgG low > 73
Shewanella loihica PV-4 0.41 Shew_1941 signal peptide peptidase SppA, 67K type (RefSeq) 0.72 Shew_1350 flgG flagellar basal body rod protein FlgG (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.40 MIT1002_01840 Protease 4 0.65 MIT1002_01046 Distal rod protein low > 70
Shewanella amazonensis SB2B 0.40 Sama_1723 signal peptide peptidase SppA, 67K type (RefSeq) 0.71 Sama_2313 flgG flagellar basal body rod protein FlgG (RefSeq) low > 62
Lysobacter sp. OAE881 0.30 ABIE51_RS02175 signal peptide peptidase SppA 0.54 ABIE51_RS16695 flagellar basal-body rod protein FlgG low > 62
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03985 signal peptide peptidase SppA 0.57 LRK53_RS15150 flagellar basal-body rod protein FlgG low > 59
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.4759.1 protease IV 0.54 Xcc-8004.2784.1 Flagellar basal-body rod protein FlgG low > 74
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS12520 signal peptide peptidase SppA 0.58 ABZR86_RS20100 flagellar basal-body rod protein FlgG low > 74
Rhodanobacter denitrificans MT42 0.28 LRK55_RS10795 signal peptide peptidase SppA 0.57 LRK55_RS13170 flagellar basal-body rod protein FlgG low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS11090 signal peptide peptidase SppA 0.57 LRK54_RS13430 flagellar basal-body rod protein FlgG low > 59
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_12785 sppA signal peptide peptidase SppA 0.57 OKGIIK_02675 flgG flagellar basal-body rod protein FlgG low > 53
Sphingobium sp. HT1-2 0.28 GFF1301 Signal peptide peptidase SppA (protease 4) 0.49 GFF3709 Flagellar basal-body rod protein FlgG low > 95
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1351 signal peptide peptidase SppA, 67K type 0.48 Ga0059261_2094 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 68
Caulobacter crescentus NA1000 0.17 CCNA_00976 signal peptide peptidase A 0.40 CCNA_02143 flagellar basal-body rod protein flgG low > 66
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_00976 signal peptide peptidase A 0.40 CCNA_02143 flagellar basal-body rod protein flgG low > 67
Azospirillum brasilense Sp245 0.16 AZOBR_RS10750 protease IV 0.46 AZOBR_RS11220 flagellar basal body rod protein FlgG low > 97
Magnetospirillum magneticum AMB-1 0.16 AMB_RS08065 serine protease 0.46 AMB_RS17680 flagellar basal-body rod protein FlgG low > 64
Rhodospirillum rubrum S1H 0.16 Rru_A2621 Peptidase S49 (NCBI) 0.40 Rru_A2843 hypothetical protein (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS01460 signal peptide peptidase SppA 0.42 A4249_RS09625 flagellar basal-body rod protein FlgG low > 48
Azospirillum sp. SherDot2 0.16 MPMX19_00798 Protease 4 0.45 MPMX19_01484 Flagellar basal-body rod protein FlgG low > 112

Not shown: 16 genomes with orthologs for CSW01_09950 only; 51 genomes with orthologs for CSW01_11200 only