| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_17130 | | Zn-dependent protease | 1.0 | CSW01_09945 | | NADPH-dependent 2,4-dienoyl-CoA reductase | 0.42 | 19 |
| Shewanella loihica PV-4 | 0.56 | Shew_2842 | | peptidase M48, Ste24p (RefSeq) | 0.61 | Shew_1942 | | NADH:flavin oxidoreductase/NADH oxidase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.56 | Sama_2507 | | hypothetical protein (RefSeq) | 0.63 | Sama_1724 | | NADH:flavin oxidoreductase/NADH oxidase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_0964 | | peptidase M48, Ste24p (RefSeq) | 0.60 | Shewana3_1965 | | 2,4-dienoyl-CoA reductase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.54 | SO1137 | | conserved hypothetical protein (NCBI ptt file) | 0.61 | SO2419 | | 2,4-dienoyl-CoA reductase, putative (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_03052 | | TPR repeat-containing protein YfgC precursor | 0.61 | MIT1002_03065 | | 2,4-dienoyl-CoA reductase [NADPH] | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.47 | B158DRAFT_0072 | | Peptidase family M48. | 0.62 | B158DRAFT_1579 | | 2,4-dienoyl-CoA reductase (EC 1.3.1.34) | low | > 40 |
| Marinobacter adhaerens HP15 | 0.44 | HP15_2664 | | peptidase M48, Ste24p | 0.56 | HP15_1058 | | 2,4-dienoyl-CoA reductase | low | > 73 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.40 | Xcc-8004.9.1 | | Zn-dependent protease with chaperone function | 0.54 | Xcc-8004.4097.1 | | 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) | low | > 74 |
| Rhodanobacter sp000427505 FW510-R12 | 0.39 | LRK53_RS13345 | | M48 family metallopeptidase | 0.55 | LRK53_RS11340 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_04060 | bepA | peptidase | 0.55 | OKGIIK_07280 | fadH | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 53 |
| Rhodanobacter denitrificans MT42 | 0.39 | LRK55_RS15010 | | M48 family metallopeptidase | 0.55 | LRK55_RS17875 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.39 | LRK54_RS15295 | | M48 family metallopeptidase | 0.55 | LRK54_RS18020 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 59 |
| Lysobacter sp. OAE881 | 0.39 | ABIE51_RS00775 | | M48 family metallopeptidase | 0.52 | ABIE51_RS06045 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS20450 | | M48 family metallopeptidase | 0.56 | ABZR86_RS05580 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 74 |
| Pseudomonas sp. BP01 | 0.28 | JOY50_RS19455 | | M48 family metallopeptidase | 0.53 | JOY50_RS16515 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.28 | COO64_RS03365 | | M48 family metallopeptidase | 0.53 | COO64_RS05540 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 91 |
| Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_2951 | | Zn-dependent protease with chaperone function | 0.55 | Pf1N1B4_3955 | | 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) | low | > 87 |
| Pseudomonas orientalis W4I3 | 0.27 | QF045_RS07485 | | M48 family metalloprotease | 0.53 | QF045_RS18825 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.27 | PFLU_RS04560 | | M48 family metalloprotease | 0.53 | PFLU_RS19095 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.27 | PFLU_RS04560 | | M48 family metalloprotease | 0.53 | PFLU_RS19095 | | NADPH-dependent 2,4-dienoyl-CoA reductase | low | > 109 |
| Pseudomonas putida KT2440 | 0.27 | PP_0759 | | conserved exported protein of unknown function | 0.53 | PP_2008 | | 2,4-dienoyl-CoA reductase | low | > 96 |
| Pseudomonas lactucae CFBP13502 | 0.27 | GEMAOFIL_01106 | | Metalloprotease LoiP | 0.53 | GEMAOFIL_03732 | | 2,4-dienoyl-CoA reductase | low | > 96 |
| Pseudomonas sp. S08-1 | 0.27 | OH686_06365 | | Zn-dependent protease with chaperone function | 0.55 | OH686_04325 | | 2,4-dienoyl-CoA reductase [NADPH] | low | > 80 |
| Pseudomonas simiae WCS417 | 0.27 | PS417_04515 | | peptidase M48 | 0.53 | PS417_17165 | | 2,4-dienoyl-CoA reductase | low | > 88 |
| Pseudomonas aeruginosa PA14 | 0.27 | IKLFDK_00345 | | peptidase M48 | 0.54 | IKLFDK_29505 | | NADPH-dependent 2 4-dienoyl-CoA reductase | low | > 98 |
| Pseudomonas sp. FW215-L2 | 0.27 | GFF1971 | | Metalloprotease LoiP | 0.53 | GFF4583 | | 2,4-dienoyl-CoA reductase [NADPH] | 0.21 | 41 |
| Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_3249 | | Zn-dependent protease with chaperone function | 0.54 | Pf6N2E2_2209 | | 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) | low | > 103 |
| Pseudomonas aeruginosa MRSN321 | 0.27 | PFGADD_04844 | | Peptidase M48 domain-containing protein | 0.54 | PFGADD_05044 | | 2 4-dienoyl-CoA reductase [NADPH] | low | > 99 |
| Pseudomonas protegens RBAN4 | 0.27 | FABNJH_25790 | | M48 family peptidase | 0.55 | FABNJH_20525 | fadH | 2,4-dienoyl-CoA reductase NADPH | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_14985 | | peptidase M48 | 0.55 | AO353_20220 | | 2,4-dienoyl-CoA reductase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.26 | AO356_06950 | | peptidase M48 | 0.54 | AO356_01700 | | 2,4-dienoyl-CoA reductase | low | > 104 |
| Pseudomonas sp. RS175 | 0.26 | PFR28_03625 | | Metalloprotease LoiP | 0.55 | PFR28_01236 | | 2,4-dienoyl-CoA reductase | low | > 88 |
| Pseudomonas sp. DMC3 | 0.26 | GFF4457 | | Metalloprotease LoiP | 0.55 | GFF1451 | | 2,4-dienoyl-CoA reductase | low | > 89 |
| Pseudomonas fluorescens GW456-L13 | 0.26 | PfGW456L13_1614 | | Zn-dependent protease with chaperone function | 0.55 | PfGW456L13_2567 | | 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.26 | Psest_3228 | | Zn-dependent protease with chaperone function | 0.53 | Psest_2554 | | NADH:flavin oxidoreductases, Old Yellow Enzyme family | low | > 67 |
Not shown: 18 genomes with orthologs for CSW01_17130 only; 44 genomes with orthologs for CSW01_09945 only