Conservation of cofitness between CSW01_02010 and CSW01_09445 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02010 assimilatory sulfite reductase (NADPH) flavoprotein subunit 1.0 CSW01_09445 transcription-repair coupling factor 0.55 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4820 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.64 GFF3397 Transcription-repair coupling factor 0.41 65
Escherichia coli BW25113 0.53 b2764 cysJ sulfite reductase, alpha subunit, flavoprotein (NCBI) 0.64 b1114 mfd transcription-repair coupling factor (NCBI) low > 76
Escherichia coli ECRC62 0.53 BNILDI_10735 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 BNILDI_19160 mfd transcription-repair coupling factor low > 75
Escherichia coli BL21 0.53 ECD_02609 sulfite reductase, alpha subunit, flavoprotein 0.64 ECD_01110 transcription-repair coupling factor low > 61
Escherichia coli ECOR38 0.53 HEPCGN_19095 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.65 HEPCGN_24015 mfd transcription-repair coupling factor low > 88
Escherichia coli ECOR27 0.53 NOLOHH_12185 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 NOLOHH_20995 mfd transcription-repair coupling factor low > 76
Escherichia fergusonii Becca 0.53 EFB2_01153 Sulfite reductase [NADPH] flavoprotein alpha-component 0.64 EFB2_02861 Transcription-repair-coupling factor low > 86
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2853 sulfite reductase [NADPH] flavoprotein, alpha-component 0.64 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00969 Sulfite reductase [NADPH] flavoprotein alpha-component 0.64 OHPLBJKB_02552 Transcription-repair-coupling factor low > 74
Escherichia coli ECRC99 0.53 KEDOAH_07755 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 KEDOAH_24285 mfd transcription-repair coupling factor — —
Escherichia coli ECRC101 0.53 MCAODC_10895 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 MCAODC_22830 mfd transcription-repair coupling factor low > 87
Escherichia coli ECRC102 0.53 NIAGMN_18140 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 NIAGMN_24360 mfd transcription-repair coupling factor low > 80
Escherichia coli ECRC98 0.53 JDDGAC_24035 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 JDDGAC_07130 mfd transcription-repair coupling factor low > 87
Escherichia coli ECRC100 0.53 OKFHMN_20370 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 OKFHMN_03470 mfd transcription-repair coupling factor low > 79
Klebsiella michiganensis M5al 0.52 BWI76_RS22765 sulfite reductase subunit alpha 0.64 BWI76_RS11205 transcription-repair coupling factor low > 92
Dickeya dadantii 3937 0.52 DDA3937_RS16945 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 DDA3937_RS13000 transcription-repair coupling factor low > 74
Klebsiella pneumoniae MKP103 0.52 KDGMDA_03300 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.63 KDGMDA_18800 transcription-repair coupling factor low > 95
Serratia liquefaciens MT49 0.52 IAI46_03685 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 IAI46_10320 transcription-repair coupling factor low > 87
Dickeya dianthicola ME23 0.52 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.63 DZA65_RS13530 transcription-repair coupling factor low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS17015 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 HGI48_RS13065 transcription-repair coupling factor low > 71
Pectobacterium carotovorum WPP14 0.52 HER17_RS04235 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 HER17_RS08775 transcription-repair coupling factor low > 75
Rahnella sp. WP5 0.51 EX31_RS07905 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.65 EX31_RS24520 transcription-repair coupling factor low > 89
Pantoea sp. MT58 0.51 IAI47_04150 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 IAI47_11975 transcription-repair coupling factor low > 76
Alteromonas macleodii MIT1002 0.51 MIT1002_03380 Sulfite reductase [NADPH] flavoprotein alpha-component 0.57 MIT1002_01646 Transcription-repair-coupling factor — —
Enterobacter sp. TBS_079 0.51 MPMX20_03643 Sulfite reductase [NADPH] flavoprotein alpha-component 0.64 MPMX20_01795 Transcription-repair-coupling factor low > 85
Erwinia tracheiphila SCR3 0.51 LU632_RS06400 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.63 LU632_RS14730 mfd transcription-repair coupling factor low > 73
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_17420 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.63 IJEDHG_00560 mfd transcription-repair coupling factor low > 61
Pantoea agglomerans CFBP13505 P0401 0.51 PagCFBP13505_RS16815 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 PagCFBP13505_RS19410 transcription-repair coupling factor low > 74
Shewanella amazonensis SB2B 0.50 Sama_2839 sulfite reductase subunit alpha (RefSeq) 0.55 Sama_1330 transcription-repair coupling factor (RefSeq) low > 62
Shewanella oneidensis MR-1 0.50 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component (NCBI ptt file) 0.56 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.49 Shew_0665 sulfite reductase (NADPH) flavoprotein, alpha chain (RefSeq) 0.58 Shew_1630 transcription-repair coupling factor (RefSeq) low > 60
Erwinia amylovora T8 0.49 OLJFJH_09300 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.64 OLJFJH_15445 transcription-repair coupling factor low > 58
Shewanella sp. ANA-3 0.48 Shewana3_0855 sulfite reductase (NADPH) alpha subunit (RefSeq) 0.56 Shewana3_2289 transcription-repair coupling factor (RefSeq) low > 73
Lysobacter sp. OAE881 0.42 ABIE51_RS15825 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.49 ABIE51_RS14320 transcription-repair coupling factor low > 62
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_2160 sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2) 0.50 B158DRAFT_1800 transcription-repair coupling factor low > 40
Rhodanobacter sp000427505 FW510-R12 0.39 LRK53_RS09180 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.49 LRK53_RS08005 transcription-repair coupling factor low > 59
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS00930 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.50 LRK54_RS02040 transcription-repair coupling factor low > 59
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_05960 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.49 OKGIIK_09105 mfd transcription-repair coupling factor low > 53
Rhodanobacter denitrificans MT42 0.38 LRK55_RS00705 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.49 LRK55_RS01815 transcription-repair coupling factor low > 63
Castellaniella sp019104865 MT123 0.38 ABCV34_RS00220 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.43 ABCV34_RS08660 transcription-repair coupling factor low > 48
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS05905 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.49 ABZR86_RS21210 transcription-repair coupling factor low > 74
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1258.1 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.47 Xcc-8004.1775.1 Transcription-repair coupling factor low > 74
Agrobacterium fabrum C58 0.35 Atu0146 sulfite reductase (NADPH) flavoprotein alpha-component 0.32 Atu1778 transcription-repair coupling factor low > 89
Pseudomonas orientalis W4I3 0.18 QF045_RS15700 sulfite reductase flavoprotein subunit alpha 0.53 QF045_RS10280 transcription-repair coupling factor low > 93
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.32 CCNA_01920 transcription-repair coupling factor Mfd low > 67
Caulobacter crescentus NA1000 0.16 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.32 CCNA_01920 transcription-repair coupling factor Mfd low > 66
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS37040 sulfite reductase subunit alpha 0.44 RR42_RS07845 transcription-repair coupling factor low > 128
Pseudomonas stutzeri RCH2 0.14 Psest_3345 Sulfite reductase, alpha subunit (flavoprotein) 0.55 Psest_1653 transcription-repair coupling factor (mfd) low > 67

Not shown: 1 genomes with orthologs for CSW01_02010 only; 60 genomes with orthologs for CSW01_09445 only