Conservation of cofitness between CSW01_04460 and CSW01_08640 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04460 lytic transglycosylase F 1.0 CSW01_08640 envelope biogenesis factor ElyC 0.73 15
Erwinia tracheiphila SCR3 0.44 LU632_RS17980 mltF membrane-bound lytic murein transglycosylase MltF 0.28 LU632_RS09860 elyC envelope biogenesis factor ElyC low > 74
Erwinia tracheiphila HP pepo 2.2 0.44 IJEDHG_02975 mltF membrane-bound lytic murein transglycosylase MltF 0.28 IJEDHG_20360 elyC envelope biogenesis factor ElyC low > 61
Pantoea agglomerans CFBP13505 P0401 0.43 PagCFBP13505_RS14815 membrane-bound lytic murein transglycosylase MltF 0.26 PagCFBP13505_RS04525 envelope biogenesis factor ElyC low > 74
Pantoea sp. MT58 0.43 IAI47_04925 membrane-bound lytic murein transglycosylase MltF 0.25 IAI47_12805 envelope biogenesis factor ElyC low > 76
Rahnella sp. WP5 0.43 EX31_RS21890 membrane-bound lytic murein transglycosylase MltF 0.28 EX31_RS18185 envelope biogenesis factor ElyC low > 89
Serratia liquefaciens MT49 0.43 IAI46_19480 membrane-bound lytic murein transglycosylase MltF 0.31 IAI46_08710 envelope biogenesis factor ElyC low > 86
Klebsiella pneumoniae MKP103 0.43 KDGMDA_28400 membrane-bound lytic murein transglycosylase MltF 0.30 KDGMDA_18025 envelope biogenesis factor ElyC low > 95
Dickeya dadantii 3937 0.43 DDA3937_RS15660 membrane-bound lytic murein transglycosylase MltF 0.33 DDA3937_RS09870 envelope biogenesis factor ElyC low > 74
Dickeya dianthicola 67-19 0.43 HGI48_RS15755 membrane-bound lytic murein transglycosylase MltF 0.33 HGI48_RS09880 envelope biogenesis factor ElyC low > 71
Dickeya dianthicola ME23 0.42 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF 0.32 DZA65_RS10215 envelope biogenesis factor ElyC low > 75
Klebsiella michiganensis M5al 0.42 BWI76_RS21275 lytic transglycosylase F 0.27 BWI76_RS09825 envelope biogenesis factor ElyC low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2461 Transglycosylase, Slt family 0.29 GFF3677 Membrane Protein Functionally coupled to the MukBEF Chromosome Partitioning Mechanism low > 78
Enterobacter sp. TBS_079 0.42 MPMX20_03427 Membrane-bound lytic murein transglycosylase F 0.27 MPMX20_01578 hypothetical protein low > 85
Escherichia coli BW25113 0.42 b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) 0.30 b0920 ycbC conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECOR38 0.42 HEPCGN_20610 mltF membrane-bound lytic murein transglycosylase MltF 0.30 HEPCGN_23100 elyC envelope biogenesis factor ElyC low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01149 Membrane-bound lytic murein transglycosylase F 0.30 OHPLBJKB_02747 hypothetical protein low > 74
Escherichia coli ECOR27 0.42 NOLOHH_13140 mltF membrane-bound lytic murein transglycosylase MltF 0.30 NOLOHH_21985 elyC envelope biogenesis factor ElyC low > 76
Escherichia fergusonii Becca 0.42 EFB2_01338 Membrane-bound lytic murein transglycosylase F 0.30 EFB2_03144 hypothetical protein low > 86
Escherichia coli ECRC100 0.42 OKFHMN_21465 mltF membrane-bound lytic murein transglycosylase MltF 0.30 OKFHMN_05425 elyC envelope biogenesis factor ElyC low > 79
Escherichia coli ECRC98 0.42 JDDGAC_25130 mltF membrane-bound lytic murein transglycosylase MltF 0.30 JDDGAC_09035 elyC envelope biogenesis factor ElyC 0.35 8
Escherichia coli Nissle 1917 0.42 ECOLIN_RS14475 membrane-bound lytic murein transglycosylase MltF 0.30 ECOLIN_RS04870 envelope biogenesis factor ElyC — —
Escherichia coli ECRC101 0.42 MCAODC_11995 mltF membrane-bound lytic murein transglycosylase MltF 0.30 MCAODC_24815 elyC envelope biogenesis factor ElyC low > 88
Escherichia coli ECRC102 0.42 NIAGMN_19235 mltF membrane-bound lytic murein transglycosylase MltF 0.30 NIAGMN_03145 elyC envelope biogenesis factor ElyC low > 80
Escherichia coli ECRC99 0.42 KEDOAH_06755 mltF membrane-bound lytic murein transglycosylase MltF 0.30 KEDOAH_22310 elyC envelope biogenesis factor ElyC — —
Escherichia coli ECRC62 0.42 BNILDI_11940 mltF membrane-bound lytic murein transglycosylase MltF 0.29 BNILDI_20240 elyC envelope biogenesis factor ElyC low > 75
Erwinia amylovora T8 0.41 OLJFJH_10300 membrane-bound lytic murein transglycosylase MltF 0.26 OLJFJH_16085 envelope biogenesis factor ElyC low > 58
Pectobacterium carotovorum WPP14 0.41 HER17_RS05905 membrane-bound lytic murein transglycosylase MltF 0.34 HER17_RS12070 envelope biogenesis factor ElyC low > 75
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0090 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.28 EX28DRAFT_2016 Uncharacterized conserved protein low > 76
Shewanella amazonensis SB2B 0.39 Sama_2351 Slt family transglycosylase (RefSeq) 0.18 Sama_2230 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.38 Shew_1300 lytic transglycosylase, catalytic (RefSeq) 0.21 Shew_1429 hypothetical protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.37 MIT1002_01026 Membrane-bound lytic murein transglycosylase F precursor 0.12 MIT1002_02841 hypothetical protein low > 70
Shewanella sp. ANA-3 0.36 Shewana3_1239 lytic transglycosylase, catalytic (RefSeq) 0.16 Shewana3_2789 hypothetical protein (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.33 Psest_1217 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.10 Psest_0527 Uncharacterized conserved protein low > 67
Pseudomonas fluorescens SBW25 0.32 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF 0.11 PFLU_RS26580 YdcF family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS24690 membrane-bound lytic murein transglycosylase MltF 0.11 PFLU_RS26580 YdcF family protein low > 109
Pseudomonas sp. DMC3 0.32 GFF1961 Membrane-bound lytic murein transglycosylase F 0.11 GFF3895 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_17515 murein transglycosylase 0.11 AO356_15385 hypothetical protein low > 104
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4836 Transglycosylase, Slt family 0.10 PfGW456L13_1375 Putative membrane protein low > 87
Pseudomonas simiae WCS417 0.32 PS417_23025 murein transglycosylase 0.11 PS417_24650 membrane protein low > 88
Pseudomonas sp. RS175 0.32 PFR28_03519 Membrane-bound lytic murein transglycosylase F 0.12 PFR28_03853 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_888 Transglycosylase, Slt family 0.10 Pf1N1B4_2707 Putative membrane protein low > 87
Pseudomonas sp. SVBP6 0.31 COO64_RS04690 mltF membrane-bound lytic murein transglycosylase MltF 0.12 COO64_RS15535 YdcF family protein low > 93
Pseudomonas putida KT2440 0.31 PP_1036 membrane-bound lytic murein transglycosylase F 0.12 PP_4792 conserved exported protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_04490 murein transglycosylase 0.10 AO353_06400 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1268 extracellular solute-binding protein, family 3:SLT 0.12 Psyr_4350 Protein of unknown function DUF218 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1268 extracellular solute-binding protein, family 3:SLT 0.12 Psyr_4350 Protein of unknown function DUF218 low > 86
Pseudomonas aeruginosa PA14 0.30 IKLFDK_19215 membrane-bound lytic murein transglycosylase MltF 0.12 IKLFDK_20565 DUF218 domain-containing protein low > 100
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5430 Transglycosylase, Slt family 0.11 Pf6N2E2_5013 Putative membrane protein low > 103
Pseudomonas sp. S08-1 0.30 OH686_17625 Membrane-bound lytic murein transglycosylase F 0.11 OH686_09240 Uncharacterized DUF218 membrane protein low > 80
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_04758 Membrane-bound lytic murein transglycosylase F 0.12 GEMAOFIL_05083 hypothetical protein low > 93
Dechlorosoma suillum PS 0.22 Dsui_1697 putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein 0.09 Dsui_2924 hypothetical protein low > 51
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS11810 transglycosylase SLT domain-containing protein 0.10 ABI39_RS13575 YdcF family protein low > 72

Not shown: 11 genomes with orthologs for CSW01_04460 only; 11 genomes with orthologs for CSW01_08640 only