Conservation of cofitness between CSW01_11355 and CSW01_08450 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11355 phosphoribosylglycinamide formyltransferase 1.0 CSW01_08450 antimicrobial peptide ABC transporter permease SapB 0.64 18
Rahnella sp. WP5 0.65 EX31_RS22690 phosphoribosylglycinamide formyltransferase 0.51 EX31_RS15705 peptide ABC transporter permease SapB — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.47 EX28DRAFT_0973 ABC-type antimicrobial peptide transport system, permease component — —
Enterobacter sp. TBS_079 0.65 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.49 MPMX20_02475 Putrescine export system permease protein SapB low > 85
Escherichia coli Nissle 1917 0.65 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase 0.51 ECOLIN_RS07820 putrescine export ABC transporter permease SapB — —
Escherichia coli ECOR27 0.65 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase 0.51 NOLOHH_20150 sapB putrescine ABC transporter permease SapB — —
Escherichia coli BL21 0.65 ECD_02392 phosphoribosylglycinamide formyltransferase 1 0.51 ECD_01270 antimicrobial peptide transport ABC transporter permease — —
Escherichia coli ECRC99 0.65 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase 0.51 KEDOAH_26310 sapB putrescine ABC transporter permease SapB — —
Escherichia fergusonii Becca 0.65 EFB2_01398 Phosphoribosylglycinamide formyltransferase 0.51 EFB2_02627 Putrescine export system permease protein SapB — —
Escherichia coli ECRC62 0.65 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase 0.51 BNILDI_18300 sapB putrescine ABC transporter permease SapB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase 0.51 OHPLBJKB_02389 Putrescine export system permease protein SapB — —
Escherichia coli ECOR38 0.65 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase 0.51 HEPCGN_25735 sapB putrescine ABC transporter permease SapB — —
Escherichia coli BW25113 0.65 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.51 b1293 sapB predicted antimicrobial peptide transporter subunit (NCBI) low > 76
Escherichia coli ECRC100 0.64 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase 0.51 OKFHMN_02465 sapB putrescine ABC transporter permease SapB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.48 GFF2689 Peptide transport system permease protein SapB low > 78
Escherichia coli ECRC98 0.64 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase 0.51 JDDGAC_05010 sapB putrescine ABC transporter permease SapB — —
Escherichia coli ECRC102 0.64 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase 0.51 NIAGMN_26635 sapB putrescine ABC transporter permease SapB — —
Escherichia coli ECRC101 0.64 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase 0.51 MCAODC_15805 sapB putrescine ABC transporter permease SapB — —
Pantoea sp. MT58 0.64 IAI47_05175 phosphoribosylglycinamide formyltransferase 0.49 IAI47_09375 peptide ABC transporter permease SapB — —
Klebsiella michiganensis M5al 0.64 BWI76_RS20970 phosphoribosylglycinamide formyltransferase 0.48 BWI76_RS12415 antimicrobial peptide ABC transporter permease SapB — —
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS15065 phosphoribosylglycinamide formyltransferase 0.46 PagCFBP13505_RS06775 peptide ABC transporter permease SapB — —
Serratia liquefaciens MT49 0.64 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.52 IAI46_13530 peptide ABC transporter permease SapB — —
Dickeya dianthicola ME23 0.63 DZA65_RS06415 phosphoribosylglycinamide formyltransferase 0.50 DZA65_RS12960 peptide ABC transporter permease SapB — —
Dickeya dadantii 3937 0.63 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase 0.50 DDA3937_RS12445 peptide ABC transporter permease SapB low > 74
Klebsiella pneumoniae MKP103 0.63 KDGMDA_27810 phosphoribosylglycinamide formyltransferase 0.48 KDGMDA_19880 putrescine ABC transporter permease SapB low > 95
Dickeya dianthicola 67-19 0.63 HGI48_RS06065 phosphoribosylglycinamide formyltransferase 0.50 HGI48_RS12510 peptide ABC transporter permease SapB — —
Erwinia amylovora T8 0.62 OLJFJH_10585 phosphoribosylglycinamide formyltransferase 0.53 OLJFJH_13655 putrescine ABC transporter permease SapB low > 58
Erwinia tracheiphila SCR3 0.62 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase 0.48 LU632_RS11575 sapB putrescine ABC transporter permease SapB low > 73
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_18360 purN phosphoribosylglycinamide formyltransferase 0.48 IJEDHG_23000 sapB putrescine ABC transporter permease SapB low > 61
Shewanella sp. ANA-3 0.61 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.32 Shewana3_2651 binding-protein-dependent transport systems inner membrane component (RefSeq) — —
Shewanella oneidensis MR-1 0.60 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) 0.31 SO1804 sapB peptide ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas lactucae CFBP13502 0.60 GEMAOFIL_04218 Phosphoribosylglycinamide formyltransferase 0.32 GEMAOFIL_01016 Dipeptide transport system permease protein DppB low > 96
Pectobacterium carotovorum WPP14 0.60 HER17_RS15470 phosphoribosylglycinamide formyltransferase 0.53 HER17_RS09490 putrescine ABC transporter permease SapB — —
Pseudomonas putida KT2440 0.59 PP_1664 phosphoribosylglycinamide formyltransferase 1 0.32 PP_0881 dipeptide ABC transporter - putative membrane subunit low > 96
Alteromonas macleodii MIT1002 0.59 MIT1002_02220 Phosphoribosylglycinamide formyltransferase 0.32 MIT1002_01140 Dipeptide transport system permease protein DppB — —
Pseudomonas simiae WCS417 0.59 PS417_20125 phosphoribosylglycinamide formyltransferase 0.32 PS417_04060 dipeptide ABC transporter, permease component (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.32 PFLU_RS04100 ABC transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.32 PFLU_RS04100 ABC transporter permease subunit low > 109
Shewanella loihica PV-4 0.58 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) 0.29 Shew_2499 binding-protein-dependent transport systems inner membrane component (RefSeq) — —
Pseudomonas sp. SVBP6 0.58 COO64_RS07300 purN phosphoribosylglycinamide formyltransferase 0.32 COO64_RS04100 ABC transporter permease subunit low > 93
Pseudomonas aeruginosa MRSN321 0.57 DY961_RS07720 purN;go_function=phosphoribosylglycinamide phosphoribosylglycinamide formyltransferase 0.33 DY961_RS23955 ABC transporter permease subunit low > 100
Pseudomonas aeruginosa PA14 0.57 IKLFDK_04255 phosphoribosylglycinamide formyltransferase 0.33 IKLFDK_01565 Di/tripeptide transport system permease protein DppB low > 98
Pseudomonas aeruginosa PUPa3 0.57 DQ20_RS45075 purN;go_function=phosphoribosylglycinamide phosphoribosylglycinamide formyltransferase 0.33 DQ20_RS56420 ABC transporter permease subunit low > 101
Pseudomonas orientalis W4I3 0.57 QF045_RS22220 phosphoribosylglycinamide formyltransferase 0.32 QF045_RS07055 ABC transporter permease subunit low > 93
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.32 B158DRAFT_1046 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components — —
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_02685 phosphoribosylglycinamide formyltransferase 0.31 AO353_05395 peptide ABC transporter permease low > 101
Pseudomonas segetis P6 0.56 ACVTMO_RS08225 purN phosphoribosylglycinamide formyltransferase 0.31 ACVTMO_RS19260 ABC transporter permease subunit — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.32 PfGW456L13_5055 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) low > 87
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.32 Psyr_4239 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.32 Psyr_4239 Binding-protein-dependent transport systems inner membrane component 0.43 76
Shewanella amazonensis SB2B 0.53 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.30 Sama_1234 peptide ABC transporter, permease protein (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase 0.34 BPHYT_RS18685 peptide ABC transporter permease low > 109
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.33 H281DRAFT_05803 dipeptide transport system permease protein low > 103
Rhodospirillum rubrum S1H 0.42 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) 0.33 Rru_A2357 Binding-protein-dependent transport systems inner membrane component (NCBI) — —
Rhizobium sp. OAE497 0.42 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase 0.32 ABIE40_RS03350 ABC transporter permease subunit low > 107
Azospirillum brasilense Sp245 0.41 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase 0.33 AZOBR_RS21765 peptide ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.40 MPMX19_01305 Phosphoribosylglycinamide formyltransferase 0.33 MPMX19_04418 Dipeptide transport system permease protein DppB — —
Agrobacterium fabrum C58 0.39 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 0.33 Atu4114 dipeptide ABC transporter permease low > 89

Not shown: 59 genomes with orthologs for CSW01_11355 only; 0 genomes with orthologs for CSW01_08450 only