Conservation of cofitness between CSW01_13550 and CSW01_07965 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13550 O-succinylhomoserine (thiol)-lyase 1.0 CSW01_07965 LysR family transcriptional regulator 0.61 11
Pectobacterium carotovorum WPP14 0.60 HER17_RS00910 cystathionine gamma-synthase 0.36 HER17_RS18045 LysR family transcriptional regulator low > 75
Enterobacter asburiae PDN3 0.59 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.34 EX28DRAFT_2404 Transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.59 MPMX20_04531 Cystathionine gamma-synthase 0.34 MPMX20_01221 HTH-type transcriptional regulator BenM low > 85
Klebsiella pneumoniae MKP103 0.59 KDGMDA_09295 cystathionine gamma-synthase 0.34 KDGMDA_23755 transcriptional regulator low > 94
Klebsiella pneumoniae MRSN742743 0.59 GJGHJB_04907 metB cystathionine gamma-synthase 0.33 GJGHJB_02123 lysR HTH-type transcriptional regulator BenM low > 83
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.32 GFF3076 LysR family transcriptional regulator STM3121 low > 78
Serratia liquefaciens MT49 0.59 IAI46_24540 cystathionine gamma-synthase 0.26 IAI46_11680 LysR family transcriptional regulator low > 87
Dickeya dadantii 3937 0.59 DDA3937_RS00950 cystathionine gamma-synthase 0.36 DDA3937_RS03225 LysR family transcriptional regulator low > 74
Klebsiella michiganensis M5al 0.58 BWI76_RS00785 cystathionine gamma-synthase 0.35 BWI76_RS16740 transcriptional regulator low > 92
Dickeya dianthicola 67-19 0.58 HGI48_RS20425 cystathionine gamma-synthase 0.35 HGI48_RS03375 LysR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.58 DZA65_RS21470 cystathionine gamma-synthase 0.35 DZA65_RS03420 LysR family transcriptional regulator low > 75
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13516_RS00875 metB cystathionine gamma-synthase 0.35 PagCFBP13516_RS22590 LysR family transcriptional regulator low > 80
Rahnella sp. WP5 0.56 EX31_RS14215 cystathionine gamma-synthase 0.36 EX31_RS04240 LysR family transcriptional regulator low > 89
Pantoea sp. MT58 0.55 IAI47_00880 cystathionine gamma-synthase 0.34 IAI47_21735 LysR family transcriptional regulator low > 76
Erwinia amylovora T8 0.54 OLJFJH_06095 cystathionine gamma-synthase 0.38 OLJFJH_05375 transcriptional regulator low > 58
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1596.1 hypothetical protein 0.30 Xcc-8004.386.1 LysR family transcriptional regulator STM3121 low > 74
Pseudomonas sp. DMC3 0.38 GFF3060 Cystathionine beta-lyase 0.25 GFF3108 HTH-type transcriptional regulator BenM low > 89
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) 0.25 Pf1N1B4_1530 LysR family transcriptional regulator YnfL low > 87
Pseudomonas sp. SVBP6 0.37 COO64_RS14890 cystathionine gamma-synthase 0.27 COO64_RS13110 LysR family transcriptional regulator low > 91
Pseudomonas aeruginosa MRSN321 0.37 PFGADD_00409 cystathionine gamma-synthase 0.28 PFGADD_05267 lysR LysR substrate-binding domain-containing protein low > 99
Pseudomonas aeruginosa PA14 0.37 IKLFDK_23420 cystathionine gamma-synthase 0.28 IKLFDK_28390 LysR family transcriptional regulator low > 98
Pseudomonas aeruginosa PUPa3 0.37 NPBIFN_00413 cystathionine gamma-synthase 0.28 NPBIFN_05343 lysR LysR substrate-binding domain-containing protein low > 101
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_02861 Cystathionine beta-lyase 0.26 GEMAOFIL_00636 HTH-type transcriptional regulator BenM low > 96
Pseudomonas orientalis W4I3 0.36 QF045_RS15175 cystathionine gamma-synthase 0.27 QF045_RS05080 LysR substrate-binding domain-containing protein 0.61 61
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16625 cystathionine gamma-synthase 0.26 PFLU_RS02065 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16625 cystathionine gamma-synthase 0.26 PFLU_RS02065 LysR family transcriptional regulator low > 109
Pseudomonas putida KT2440 0.34 PP_4594 putative Cystathionine gamma-synthase 0.27 PP_5071 putative DNA-binding transcriptional regulator low > 96
Pseudomonas sp. BP01 0.34 JOY50_RS01570 PLP-dependent aspartate aminotransferase family protein 0.28 JOY50_RS09345 LysR family transcriptional regulator low > 84
Pseudomonas protegens RBAN4 0.33 FABNJH_18055 L-methionine gamma-lyase 0.26 FABNJH_02385 benM HTH-type transcriptional regulator BenM — —
Pseudomonas stutzeri RCH2 0.32 Psest_2578 O-succinylhomoserine sulfhydrylase 0.28 Psest_3707 Transcriptional regulator low > 67
Pseudomonas simiae WCS417 0.32 PS417_11735 methionine gamma-lyase 0.27 PS417_02020 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.26 PfGW456L13_255 LysR family transcriptional regulator YnfL low > 87
Pseudomonas sp. RS175 0.30 PFR28_02810 O-succinylhomoserine sulfhydrylase 0.27 PFR28_05019 HTH-type transcriptional regulator BenM low > 88
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_21470 O-succinylhomoserine sulfhydrylase 0.26 AO356_09290 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.26 Pf6N2E2_3735 LysR family transcriptional regulator YnfL low > 103
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.27 Psyr_0421 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.27 Psyr_0421 transcriptional regulator, LysR family low > 86
Variovorax sp. SCN45 0.28 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) 0.25 GFF286 Transcriptional regulator, LysR family — —
Azospirillum brasilense Sp245 0.27 AZOBR_RS11340 O-acetylhomoserine aminocarboxypropyltransferase 0.26 AZOBR_RS19665 LysR family transcripitonal regulator 0.33 34
Rhizobium sp. OAE497 0.27 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase 0.31 ABIE40_RS01530 LysR family transcriptional regulator low > 107
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase 0.29 H281DRAFT_01885 DNA-binding transcriptional regulator, LysR family low > 103
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase 0.29 BPHYT_RS10210 LysR family transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS06465 O-acetylhomoserine aminocarboxypropyltransferase 0.28 RR42_RS12375 LysR family transcriptional regulator low > 128
Paraburkholderia graminis OAS925 0.26 ABIE53_004817 O-succinylhomoserine sulfhydrylase 0.29 ABIE53_004883 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS17685 O-succinylhomoserine sulfhydrylase 0.30 QEN71_RS38685 LysR family transcriptional regulator low > 153

Not shown: 69 genomes with orthologs for CSW01_13550 only; 2 genomes with orthologs for CSW01_07965 only