Conservation of cofitness between CSW01_06825 and CSW01_06820 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06825 acylphosphatase 1.0 CSW01_06820 ribosomal RNA large subunit methyltransferase I 0.54 8
Klebsiella michiganensis M5al 0.45 BWI76_RS10060 acylphosphatase 0.64 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase low > 92
Serratia liquefaciens MT49 0.44 IAI46_08935 acylphosphatase 0.64 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3261 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative 0.64 GFF3258 LSU m5C1962 methyltransferase RlmI — —
Klebsiella pneumoniae MKP103 0.43 KDGMDA_18260 acylphosphatase 0.65 KDGMDA_18245 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Enterobacter sp. TBS_079 0.43 MPMX20_01620 Acylphosphatase 0.66 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I low > 85
Escherichia coli ECRC62 0.42 BNILDI_19900 yccX acylphosphatase 0.64 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 75
Enterobacter asburiae PDN3 0.42 EX28DRAFT_1973 Acylphosphatases 0.66 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases low > 76
Escherichia coli Nissle 1917 0.42 ECOLIN_RS05090 acylphosphatase 0.64 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Escherichia coli ECOR38 0.42 HEPCGN_23340 yccX acylphosphatase 0.63 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Escherichia fergusonii Becca 0.41 EFB2_03103 Acylphosphatase 0.63 EFB2_03104 Ribosomal RNA large subunit methyltransferase I low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02698 Acylphosphatase 0.64 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I low > 74
Escherichia coli ECRC98 0.41 JDDGAC_08790 yccX acylphosphatase 0.64 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 87
Escherichia coli ECRC100 0.41 OKFHMN_05180 yccX acylphosphatase 0.64 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 79
Escherichia coli ECRC99 0.41 KEDOAH_22555 yccX acylphosphatase 0.64 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Escherichia coli BW25113 0.41 b0968 yccX predicted acylphosphatase (NCBI) 0.64 b0967 yccW predicted methyltransferase (RefSeq) low > 76
Escherichia coli ECRC102 0.41 NIAGMN_02900 yccX acylphosphatase 0.64 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI — —
Escherichia coli ECRC101 0.41 MCAODC_24570 yccX acylphosphatase 0.64 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 87
Escherichia coli BL21 0.41 ECD_00972 weak acylphosphatase 0.64 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent — —
Rhodanobacter sp000427505 FW510-R12 0.40 LRK53_RS06175 acylphosphatase 0.27 LRK53_RS01470 class I SAM-dependent rRNA methyltransferase low > 59
Escherichia coli ECOR27 0.40 NOLOHH_21735 yccX acylphosphatase 0.64 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 76
Lysobacter sp. OAE881 0.40 ABIE51_RS05645 acylphosphatase 0.30 ABIE51_RS00980 class I SAM-dependent rRNA methyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS22070 acylphosphatase 0.28 ABZR86_RS16890 class I SAM-dependent rRNA methyltransferase low > 74
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS03730 acylphosphatase 0.27 LRK54_RS06920 class I SAM-dependent rRNA methyltransferase low > 59
Pantoea agglomerans CFBP13505 P0401 0.38 PagCFBP13505_RS04740 acylphosphatase 0.65 PagCFBP13505_RS04735 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI low > 74
Rhodanobacter denitrificans MT42 0.37 LRK55_RS03480 acylphosphatase 0.27 LRK55_RS06665 class I SAM-dependent rRNA methyltransferase — —
Marinobacter adhaerens HP15 0.37 HP15_1557 acylphosphatase 0.24 HP15_460 SAM-dependent methyltransferase — —
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS18325 acylphosphatase 0.42 RR42_RS01670 23S rRNA methyltransferase low > 128
Dechlorosoma suillum PS 0.32 Dsui_1251 acylphosphatase 0.46 Dsui_0653 putative SAM-dependent methyltransferase low > 51
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_03620 acylphosphatase 0.48 H281DRAFT_02203 SAM-dependent methyltransferase /23S rRNA m(5)C-1962 methyltransferase low > 103
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS34850 acylphosphatase 0.47 BPHYT_RS01650 23S rRNA methyltransferase 0.24 109
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS16370 acylphosphatase 0.49 QEN71_RS00350 class I SAM-dependent rRNA methyltransferase low > 153
Paraburkholderia graminis OAS925 0.31 ABIE53_004636 acylphosphatase 0.47 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase low > 113
Ralstonia solanacearum GMI1000 0.31 RS_RS16885 acylphosphatase 0.46 RS_RS00255 class I SAM-dependent rRNA methyltransferase low > 80
Ralstonia solanacearum UW163 0.30 UW163_RS04520 acylphosphatase 0.46 UW163_RS03910 class I SAM-dependent rRNA methyltransferase — —
Shewanella amazonensis SB2B 0.30 Sama_1328 acylphosphatase (RefSeq) 0.63 Sama_2965 putative SAM-dependent methyltransferase (RefSeq) low > 62
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS09075 acylphosphatase 0.46 RALBFv3_RS09670 class I SAM-dependent rRNA methyltransferase low > 76
Ralstonia solanacearum PSI07 0.29 RPSI07_RS08195 acylphosphatase 0.46 RPSI07_RS23695 class I SAM-dependent rRNA methyltransferase low > 81
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS04375 acylphosphatase 0.47 ABZR87_RS05070 class I SAM-dependent rRNA methyltransferase low > 80
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_1607 Acylphosphatases 0.29 Echvi_3350 Predicted SAM-dependent methyltransferases low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS19050 acylphosphatase 0.40 CA265_RS19815 RlmI/RlmK family 23S rRNA methyltransferase low > 88

Not shown: 4 genomes with orthologs for CSW01_06825 only; 55 genomes with orthologs for CSW01_06820 only