Conservation of cofitness between CSW01_01035 and CSW01_06605 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01035 gamma-glutamyltransferase 1.0 CSW01_06605 transcriptional regulator TyrR 0.57 7
Alteromonas macleodii MIT1002 0.42 MIT1002_02259 Gamma-glutamyltranspeptidase precursor 0.45 MIT1002_01147 Transcriptional regulatory protein TyrR low > 70
Pseudomonas sp. RS175 0.40 PFR28_03672 Glutathione hydrolase proenzyme 0.37 PFR28_00803 Transcriptional regulatory protein TyrR low > 88
Pseudomonas putida KT2440 0.39 PP_3535 putative gamma-glutamyltransferase 0.37 PP_4489 sigma-54 dependent transcriptional regulator low > 96
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2898 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.37 Pf1N1B4_3567 Phenylalanine hydroxylase transcriptional activator PhhR low > 87
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_1563 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.36 PfGW456L13_4393 Phenylalanine hydroxylase transcriptional activator PhhR low > 87
Pseudomonas sp. BP01 0.39 JOY50_RS27455 ggt gamma-glutamyltransferase 0.36 JOY50_RS01020 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 84
Pseudomonas sp. DMC3 0.39 GFF4505 Glutathione hydrolase proenzyme 0.37 GFF2415 Transcriptional regulatory protein TyrR low > 89
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_14670 gamma-glutamyltransferase 0.37 AO353_18590 AAA family ATPase low > 101
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_16305 gamma-glutamyltransferase 0.37 AO356_03970 AAA family ATPase low > 104
Pseudomonas simiae WCS417 0.38 PS417_03410 gamma-glutamyltransferase 0.37 PS417_19895 ATPase AAA low > 88
Pseudomonas orientalis W4I3 0.38 QF045_RS06425 gamma-glutamyltransferase 0.37 QF045_RS22025 sigma-54-dependent transcriptional regulator low > 93
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS03510 gamma-glutamyltransferase 0.36 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_00899 Glutathione hydrolase proenzyme 0.36 GEMAOFIL_04177 Transcriptional regulatory protein TyrR low > 96
Pseudomonas fluorescens SBW25 0.37 PFLU_RS03510 gamma-glutamyltransferase 0.36 PFLU_RS21865 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 109
Azospirillum sp. SherDot2 0.28 MPMX19_05752 Glutathione hydrolase proenzyme 0.32 MPMX19_06098 Transcriptional regulatory protein TyrR low > 112
Shewanella loihica PV-4 0.27 Shew_2158 gamma-glutamyltransferase (RefSeq) 0.40 Shew_1437 transcriptional regulator, TyrR (RefSeq) low > 60
Shewanella oneidensis MR-1 0.26 SO1952 ggt-2 gamma-glutamyltranspeptidase (NCBI ptt file) 0.40 SO1669 tyrR transcriptional regulatory protein TyrR (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.26 ECOLIN_RS19715 gamma-glutamyltransferase 0.51 ECOLIN_RS07945 transcriptional regulator TyrR — —
Klebsiella michiganensis M5al 0.26 BWI76_RS26275 gamma-glutamyltransferase 0.49 BWI76_RS12485 TyrR family transcriptional regulator low > 92
Escherichia fergusonii Becca 0.26 EFB2_00375 Glutathione hydrolase proenzyme 0.51 EFB2_02604 Transcriptional regulatory protein TyrR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF561 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.51 GFF2679 Transcriptional repressor protein TyrR low > 78
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4279 gamma-glutamyltranspeptidase 0.51 EX28DRAFT_0994 Transcriptional regulator of aromatic amino acids metabolism low > 76
Escherichia coli ECRC62 0.26 BNILDI_02915 ggt gamma-glutamyltransferase 0.50 BNILDI_18150 tyrR transcriptional regulator TyrR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00256 Glutathione hydrolase proenzyme 0.50 OHPLBJKB_02359 Transcriptional regulatory protein TyrR low > 74
Escherichia coli ECOR27 0.26 NOLOHH_08590 ggt gamma-glutamyltransferase 0.50 NOLOHH_20000 tyrR transcriptional regulator TyrR low > 76
Escherichia coli ECRC102 0.26 NIAGMN_14570 ggt gamma-glutamyltransferase 0.51 NIAGMN_26475 tyrR transcriptional regulator TyrR low > 80
Escherichia coli ECRC99 0.26 KEDOAH_11340 ggt gamma-glutamyltransferase 0.51 KEDOAH_26470 tyrR transcriptional regulator TyrR — —
Escherichia coli ECRC98 0.26 JDDGAC_20430 ggt gamma-glutamyltransferase 0.51 JDDGAC_04850 tyrR transcriptional regulator TyrR low > 87
Escherichia coli BW25113 0.26 b3447 ggt gamma-glutamyltranspeptidase periplasmic precursor (NCBI) 0.50 b1323 tyrR DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) low > 76
Escherichia coli ECRC100 0.26 OKFHMN_16800 ggt gamma-glutamyltransferase 0.51 OKFHMN_02305 tyrR transcriptional regulator TyrR low > 79
Escherichia coli BL21 0.26 ECD_03296 gamma-glutamyltranspeptidase 0.50 ECD_01300 aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase low > 61
Escherichia coli ECOR38 0.26 HEPCGN_15620 ggt gamma-glutamyltransferase 0.51 HEPCGN_25885 tyrR transcriptional regulator TyrR 0.32 70
Klebsiella pneumoniae MKP103 0.25 KDGMDA_07150 gamma-glutamyltransferase 0.50 KDGMDA_19960 transcriptional regulator TyrR low > 95
Escherichia coli ECRC101 0.25 MCAODC_07330 ggt gamma-glutamyltransferase 0.51 MCAODC_15965 tyrR transcriptional regulator TyrR low > 87
Pantoea sp. MT58 0.25 IAI47_01620 gamma-glutamyltransferase 0.52 IAI47_09440 transcriptional regulator TyrR low > 76
Shewanella amazonensis SB2B 0.25 Sama_1566 gamma-glutamyltransferase (RefSeq) 0.40 Sama_2220 transcriptional regulatory protein TyrR (RefSeq) low > 62
Enterobacter sp. TBS_079 0.25 MPMX20_04323 Glutathione hydrolase proenzyme 0.51 MPMX20_02454 Transcriptional regulatory protein TyrR low > 85
Shewanella sp. ANA-3 0.25 Shewana3_2487 gamma-glutamyltransferase 1 (RefSeq) 0.39 Shewana3_2779 transcriptional regulator, TyrR (RefSeq) low > 73
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13505_RS18135 gamma-glutamyltransferase 0.52 PagCFBP13505_RS06710 transcriptional regulator TyrR low > 74
Erwinia amylovora T8 0.25 OLJFJH_04300 gamma-glutamyltransferase 0.52 OLJFJH_13705 transcriptional regulator TyrR low > 58
Erwinia tracheiphila SCR3 0.24 LU632_RS19180 ggt gamma-glutamyltransferase 0.51 LU632_RS11530 tyrR transcriptional regulator TyrR low > 73
Erwinia tracheiphila HP pepo 2.2 0.24 IJEDHG_08020 ggt gamma-glutamyltransferase 0.51 IJEDHG_23050 tyrR transcriptional regulator TyrR low > 61
Rahnella sp. WP5 0.23 EX31_RS22075 gamma-glutamyltransferase 0.53 EX31_RS06335 transcriptional regulator TyrR low > 89
Serratia liquefaciens MT49 0.23 IAI46_04820 gamma-glutamyltransferase 0.55 IAI46_13470 transcriptional regulator TyrR low > 87
Dickeya dadantii 3937 0.23 DDA3937_RS14030 gamma-glutamyltransferase 0.53 DDA3937_RS12390 transcriptional regulator TyrR low > 74
Dickeya dianthicola 67-19 0.23 HGI48_RS14025 gamma-glutamyltransferase 0.53 HGI48_RS12460 transcriptional regulator TyrR low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS14700 gamma-glutamyltransferase 0.52 DZA65_RS12910 transcriptional regulator TyrR low > 75
Pectobacterium carotovorum WPP14 0.22 HER17_RS00330 gamma-glutamyltransferase 0.54 HER17_RS09575 transcriptional regulator TyrR low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.34 Psyr_3574 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.34 Psyr_3574 Helix-turn-helix, Fis-type low > 86
Pseudomonas sp. SVBP6 0.22 COO64_RS02790 ggt gamma-glutamyltransferase 0.37 COO64_RS21655 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 93
Pseudomonas aeruginosa MRSN321 0.22 DY961_RS19040 ggt;go_process=glutathione gamma-glutamyltransferase 0.36 DY961_RS08115 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 100
Pseudomonas aeruginosa PUPa3 0.22 DQ20_RS53165 ggt;go_process=glutathione gamma-glutamyltransferase 0.35 DQ20_RS44695 sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR low > 101
Pseudomonas aeruginosa PA14 0.22 IKLFDK_06365 gamma-glutamyltransferase 0.36 IKLFDK_03870 AAA family ATPase low > 98
Pseudomonas stutzeri RCH2 0.21 Psest_1413 gamma-glutamyltranspeptidase 0.36 Psest_0782 Transcriptional regulator of aromatic amino acids metabolism low > 67
Pseudomonas sp. S08-1 0.12 OH686_14140 gamma-glutamyltransferase 0.37 OH686_21240 Phenylalanine hydroxylase transcriptional activator PhhR low > 80

Not shown: 47 genomes with orthologs for CSW01_01035 only; 2 genomes with orthologs for CSW01_06605 only