| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12970 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 1.0 | CSW01_05660 | | dethiobiotin synthase | 0.63 | 7 |
| Klebsiella pneumoniae MKP103 | 0.70 | KDGMDA_11215 | | bifunctional 2' 3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.47 | KDGMDA_21235 | | dethiobiotin synthase | low | > 95 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_01740 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.45 | IAI46_06540 | | ATP-dependent dethiobiotin synthetase BioD | low | > 87 |
| Klebsiella michiganensis M5al | 0.69 | BWI76_RS02730 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.46 | BWI76_RS15950 | | dethiobiotin synthase | low | > 92 |
| Dickeya dianthicola ME23 | 0.68 | DZA65_RS18330 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.46 | DZA65_RS08980 | | ATP-dependent dethiobiotin synthetase BioD | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF866 | | '2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)' transl_table=11 | 0.47 | GFF1784 | | Dethiobiotin synthetase (EC 6.3.3.3) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.68 | EX28DRAFT_3400 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.45 | EX28DRAFT_1492 | | dethiobiotin synthase | low | > 76 |
| Dickeya dadantii 3937 | 0.68 | DDA3937_RS17185 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.45 | DDA3937_RS10680 | | ATP-dependent dethiobiotin synthetase BioD | low | > 74 |
| Dickeya dianthicola 67-19 | 0.68 | HGI48_RS17240 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.46 | HGI48_RS08690 | | ATP-dependent dethiobiotin synthetase BioD | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS03950 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.47 | HER17_RS10730 | | dethiobiotin synthase | low | > 75 |
| Escherichia coli ECRC101 | 0.68 | MCAODC_02560 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | MCAODC_17665 | bioD | dethiobiotin synthase | — | — |
| Escherichia coli ECRC98 | 0.68 | JDDGAC_15685 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | JDDGAC_02335 | bioD | dethiobiotin synthase | low | > 87 |
| Escherichia coli ECOR38 | 0.68 | HEPCGN_10240 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | HEPCGN_06120 | bioD | dethiobiotin synthase | low | > 88 |
| Escherichia coli Nissle 1917 | 0.68 | ECOLIN_RS24475 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | ECOLIN_RS08900 | | dethiobiotin synthase | — | — |
| Escherichia coli BW25113 | 0.68 | b4213 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (NCBI) | 0.47 | b1593 | b1593 | orf, hypothetical protein (VIMSS) | low | > 76 |
| Escherichia coli ECRC102 | 0.68 | NIAGMN_09895 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | NIAGMN_00330 | bioD | dethiobiotin synthase | low | > 80 |
| Escherichia coli ECRC100 | 0.68 | OKFHMN_12045 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | OKFHMN_27745 | bioD | dethiobiotin synthase | — | — |
| Escherichia coli ECRC99 | 0.68 | KEDOAH_16110 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | KEDOAH_00360 | bioD | dethiobiotin synthase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.68 | OHPLBJKB_03820 | | '2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase' transl_table=11 | 0.47 | OHPLBJKB_02133 | | ATP-dependent dethiobiotin synthetase BioD 1 | low | > 74 |
| Escherichia coli ECRC62 | 0.68 | BNILDI_07215 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | BNILDI_17040 | bioD | dethiobiotin synthase | low | > 75 |
| Escherichia coli ECOR27 | 0.68 | NOLOHH_04305 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | NOLOHH_18250 | bioD | dethiobiotin synthase | — | — |
| Escherichia fergusonii Becca | 0.68 | EFB2_04315 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.47 | EFB2_02399 | | ATP-dependent dethiobiotin synthetase BioD 1 | low | > 86 |
| Escherichia coli BL21 | 0.68 | ECD_04085 | | 2':3'-cyclic-nucleotide 2'-phosphodiesterase | 0.47 | ECD_01562 | | putative dethiobiotin synthetase | low | > 61 |
| Pantoea agglomerans CFBP13505 P0401 | 0.68 | PagCFBP13505_RS11285 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.46 | PagCFBP13505_RS06400 | | ATP-dependent dethiobiotin synthetase BioD | low | > 74 |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_00491 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.46 | MPMX20_02064 | | ATP-dependent dethiobiotin synthetase BioD 1 | low | > 85 |
| Pantoea sp. MT58 | 0.67 | IAI47_02690 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.45 | IAI47_09755 | | ATP-dependent dethiobiotin synthetase BioD | low | > 76 |
| Rahnella sp. WP5 | 0.67 | EX31_RS08725 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.42 | EX31_RS23710 | | ATP-dependent dethiobiotin synthetase BioD | low | > 89 |
| Erwinia amylovora T8 | 0.65 | OLJFJH_02415 | | bifunctional 2' 3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.43 | OLJFJH_14270 | | dethiobiotin synthase | low | > 58 |
| Shewanella loihica PV-4 | 0.55 | Shew_2162 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) | 0.36 | Shew_1722 | | dethiobiotin synthase (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_1585 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) | 0.38 | Shewana3_2516 | bioD | dithiobiotin synthetase (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.55 | Sama_1563 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) | 0.35 | Sama_1441 | bioD | dithiobiotin synthetase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.54 | SO3565 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase (NCBI ptt file) | 0.38 | SO2737 | bioD | dethiobiotin synthase (NCBI ptt file) | — | — |
| Agrobacterium fabrum C58 | 0.42 | Atu1210 | | putative 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase | 0.16 | Atu3999 | | dithiobiotin synthetase | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.42 | PGA1_c18140 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB | 0.14 | PGA1_c09140 | | dethiobiotin synthetase BioD | low | > 62 |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS08240 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.14 | ABIE40_RS21065 | | dethiobiotin synthase | low | > 107 |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS08230 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.28 | RPSI07_RS16695 | | dethiobiotin synthase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.33 | RS_RS16850 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.27 | RS_RS07440 | | ATP-dependent dethiobiotin synthetase BioD | — | — |
| Ralstonia solanacearum UW163 | 0.33 | UW163_RS04555 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.29 | UW163_RS14160 | | dethiobiotin synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.33 | RALBFv3_RS09040 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.29 | RALBFv3_RS00825 | | dethiobiotin synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.33 | ABZR87_RS04330 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.30 | ABZR87_RS12345 | | dethiobiotin synthase | low | > 80 |
| Rhodanobacter denitrificans MT42 | 0.32 | LRK55_RS10055 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.32 | LRK55_RS06915 | | dethiobiotin synthase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.32 | LRK54_RS10415 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.33 | LRK54_RS07180 | | dethiobiotin synthase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.32 | OKGIIK_13510 | ushA | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.36 | OKGIIK_16455 | bioD | dethiobiotin synthase | low | > 53 |
| Dyella japonica UNC79MFTsu3.2 | 0.31 | ABZR86_RS16000 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.37 | ABZR86_RS12700 | | dethiobiotin synthase | low | > 74 |
| Acidovorax sp. GW101-3H11 | 0.31 | Ac3H11_3791 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) | 0.35 | Ac3H11_3829 | | Dethiobiotin synthetase (EC 6.3.3.3) | low | > 79 |
| Cupriavidus basilensis FW507-4G11 | 0.31 | RR42_RS03845 | | 2', 3'-cyclic nucleotide 2'-phosphodiesterase | 0.28 | RR42_RS00935 | | dethiobiotin synthetase | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.31 | LRK53_RS03215 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.32 | LRK53_RS01195 | | dethiobiotin synthase | — | — |
| Variovorax sp. SCN45 | 0.30 | GFF5698 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) / 3'-nucleotidase (EC 3.1.3.6) | 0.34 | GFF143 | | Dethiobiotin synthase BioD (EC 6.3.3.3) | low | > 127 |
Not shown: 5 genomes with orthologs for CSW01_12970 only; 48 genomes with orthologs for CSW01_05660 only