Conservation of cofitness between CSW01_05300 and CSW01_04915 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05300 aromatic hydrocarbon degradation protein 1.0 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.61 7
Shewanella oneidensis MR-1 0.56 SO4232 long-chain fatty acid transport protein (NCBI ptt file) 0.78 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.47 Shewana3_3757 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.78 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 73
Shewanella loihica PV-4 0.42 Shew_3468 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.78 Shew_2923 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) low > 60
Shewanella amazonensis SB2B 0.38 Sama_0339 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.79 Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) low > 62
Dechlorosoma suillum PS 0.24 Dsui_0321 long-chain fatty acid transport protein 0.61 Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB low > 51
Rhodospirillum rubrum S1H 0.23 Rru_A1313 Membrane protein involved in aromatic hydrocarbon degradation (NCBI) 0.42 Rru_A3770 tRNA-i(6)A37 modification enzyme MiaB (NCBI) low > 58
Castellaniella sp019104865 MT123 0.22 ABCV34_RS11395 porin 0.59 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 48
Methylophilus sp. DMC18 0.21 GFF2418 47 kDa outer membrane protein 0.52 GFF2710 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 43
Azospirillum sp. SherDot2 0.21 MPMX19_00681 47 kDa outer membrane protein 0.44 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 112
Azospirillum brasilense Sp245 0.21 AZOBR_RS10410 long-chain fatty acid transporter 0.42 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase low > 97
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS21965 transporter 0.63 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS21965 transporter 0.63 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 109
Pseudomonas orientalis W4I3 0.20 QF045_RS22115 outer membrane protein transport protein 0.62 QF045_RS26910 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 93
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_04196 Putative outer membrane protein 0.63 GEMAOFIL_05078 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase low > 96
Xanthobacter sp. DMC5 0.19 GFF520 Long-chain fatty acid transport protein 0.44 GFF3719 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase — —
Lysobacter sp. OAE881 0.17 ABIE51_RS19235 outer membrane protein transport protein 0.63 ABIE51_RS15455 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 62
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS12985 outer membrane protein transport protein 0.64 ABZR86_RS09895 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 74
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_02179 long-chain fatty acid transport protein precursor 0.42 CCNA_00054 tRNA 2-methylthioadenosine synthase low > 67
Caulobacter crescentus NA1000 0.15 CCNA_02179 long-chain fatty acid transport protein precursor 0.42 CCNA_00054 tRNA 2-methylthioadenosine synthase 0.42 48
Bosea sp. OAE506 0.14 ABIE41_RS19190 outer membrane protein transport protein 0.41 ABIE41_RS04495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 77
Marinobacter adhaerens HP15 0.13 HP15_291 membrane protein involved in aromatic hydrocarbon degradation 0.66 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB low > 73
Desulfovibrio vulgaris Miyazaki F 0.13 DvMF_2250 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.31 DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) low > 51
Brevundimonas sp. GW460-12-10-14-LB2 0.13 A4249_RS00530 outer membrane protein transport protein 0.41 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 48
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU1260 outer membrane protein P1, putative (TIGR) 0.30 DVU0984 miaB tRNA-i(6)A37 modification enzyme MiaB (TIGR) low > 55
Rhodanobacter sp000427505 FW510-R12 0.11 LRK53_RS01250 outer membrane protein transport protein 0.63 LRK53_RS14850 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 59
Rhodanobacter sp. FW510-T8 0.11 OKGIIK_16490 Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.63 OKGIIK_02990 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 53
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS07145 OmpP1/FadL family transporter 0.63 LRK54_RS13750 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 59
Rhodanobacter denitrificans MT42 0.10 LRK55_RS06885 outer membrane protein transport protein 0.64 LRK55_RS13465 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 63
Pedobacter sp. GW460-11-11-14-LB5 0.10 CA265_RS02950 long-chain fatty acid transporter 0.27 CA265_RS21675 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB low > 88

Not shown: 0 genomes with orthologs for CSW01_05300 only; 91 genomes with orthologs for CSW01_04915 only