| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_14325 | | peptidase | 1.0 | CSW01_03950 | | hypothetical protein | 0.48 | 10 |
| Shewanella loihica PV-4 | 0.50 | Shew_1006 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.35 | Shew_1292 | | tetratricopeptide TPR_4 (RefSeq) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF3396 | | L,D-transpeptidase YcfS | 0.33 | GFF2410 | | Mlr7403 protein | low | > 78 |
| Klebsiella michiganensis M5al | 0.45 | BWI76_RS11200 | | transpeptidase | 0.32 | BWI76_RS21075 | | membrane protein | low | > 92 |
| Rahnella sp. WP5 | 0.45 | EX31_RS13880 | | L,D-transpeptidase family protein | 0.33 | EX31_RS20500 | | YfgM family protein | low | > 89 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_01794 | | putative L,D-transpeptidase YcfS | 0.34 | MPMX20_03391 | | hypothetical protein | low | > 85 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_07135 | ldtC | L,D-transpeptidase LdtC | 0.33 | JDDGAC_25410 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 86 |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_24355 | ldtC | L,D-transpeptidase LdtC | 0.33 | NIAGMN_19505 | yfgM | ancillary SecYEG translocon subunit YfgM | — | — |
| Escherichia coli ECRC101 | 0.44 | MCAODC_22835 | ldtC | L,D-transpeptidase LdtC | 0.33 | MCAODC_12265 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 87 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_21000 | ldtC | L,D-transpeptidase LdtC | 0.33 | NOLOHH_13385 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 75 |
| Escherichia coli BL21 | 0.44 | ECD_01109 | | L,D-transpeptidase linking Lpp to murein | 0.33 | ECD_02405 | | ancillary SecYEG translocon subunit; putative anti-RcsB factor | low | > 61 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_11175 | | L,D-transpeptidase family protein | 0.34 | IAI46_19265 | | YfgM family protein | low | > 86 |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_24280 | ldtC | L,D-transpeptidase LdtC | 0.33 | KEDOAH_06485 | yfgM | ancillary SecYEG translocon subunit YfgM | — | — |
| Escherichia coli ECRC62 | 0.44 | BNILDI_19165 | ldtC | L,D-transpeptidase LdtC | 0.33 | BNILDI_12185 | yfgM | ancillary SecYEG translocon subunit YfgM | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_02553 | | putative L,D-transpeptidase YcfS | 0.33 | OHPLBJKB_01196 | | hypothetical protein | low | > 73 |
| Escherichia coli ECRC100 | 0.44 | OKFHMN_03475 | ldtC | L,D-transpeptidase LdtC | 0.33 | OKFHMN_21735 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 80 |
| Escherichia fergusonii Becca | 0.44 | EFB2_02862 | | putative L,D-transpeptidase YcfS | 0.33 | EFB2_01377 | | hypothetical protein | low | > 86 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_1817 | | Uncharacterized protein conserved in bacteria | 0.36 | EX28DRAFT_0131 | | Uncharacterized protein conserved in bacteria | low | > 76 |
| Escherichia coli BW25113 | 0.44 | b1113 | ycfS | hypothetical protein (NCBI) | 0.33 | b2513 | yfgM | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.44 | ECOLIN_RS06420 | | L,D-transpeptidase LdtC | 0.33 | ECOLIN_RS14280 | | ancillary SecYEG translocon subunit YfgM | — | — |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_24010 | ldtC | L,D-transpeptidase LdtC | 0.33 | HEPCGN_20855 | yfgM | ancillary SecYEG translocon subunit YfgM | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS08950 | | L,D-transpeptidase family protein | 0.28 | HER17_RS06110 | | YfgM family protein | low | > 75 |
| Pantoea sp. MT58 | 0.43 | IAI47_10850 | | L,D-transpeptidase family protein | 0.33 | IAI47_05065 | | YfgM family protein | low | > 76 |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS13280 | | L,D-transpeptidase family protein | 0.32 | DZA65_RS16640 | | YfgM family protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS12815 | | L,D-transpeptidase family protein | 0.33 | HGI48_RS15565 | | YfgM family protein | low | > 71 |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS12750 | | L,D-transpeptidase family protein | 0.31 | DDA3937_RS15455 | | YfgM family protein | low | > 74 |
| Shewanella amazonensis SB2B | 0.40 | Sama_0726 | | ErfK/YbiS/YcfS/YnhG (RefSeq) | 0.33 | Sama_2363 | | hypothetical protein (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.38 | Shewana3_0844 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.31 | Shewana3_1231 | | hypothetical protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.37 | SO3748 | | LysM domain protein (NCBI ptt file) | 0.30 | SO3310 | | conserved hypothetical protein (NCBI ptt file) | — | — |
| Pseudomonas sp. BP01 | 0.36 | JOY50_RS25815 | | L,D-transpeptidase family protein | 0.22 | JOY50_RS22755 | | tetratricopeptide repeat protein | — | — |
| Pseudomonas sp. S08-1 | 0.36 | OH686_01780 | | L,D-transpeptidase | 0.25 | OH686_17540 | | UPF0070 protein YfgM | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_19015 | | hypothetical protein | 0.23 | AO353_15900 | | GTP-binding protein | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_2474 | | ErfK/YbiS/YcfS/YnhG family protein | 0.22 | Pf6N2E2_3176 | | Mlr7403 protein | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_292 | | ErfK/YbiS/YcfS/YnhG family protein | 0.23 | Pf1N1B4_852 | | Mlr7403 protein | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_03215 | | hypothetical protein | 0.23 | AO356_06580 | | GTP-binding protein | low | > 104 |
| Pseudomonas aeruginosa PA14 | 0.36 | IKLFDK_14500 | | YkuD domain-containing protein | 0.25 | IKLFDK_19575 | | GTP-binding protein | low | > 101 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_00960 | | hypothetical protein | 0.24 | PFR28_00299 | | hypothetical protein | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | 0.26 | Psyr_1250 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | 0.26 | Psyr_1250 | | conserved hypothetical protein | low | > 86 |
| Pseudomonas putida KT2440 | 0.36 | PP_2320 | | conserved exported protein of unknown function | 0.22 | PP_0855 | | conserved protein of unknown function | 0.28 | 65 |
| Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_2221 | | ErfK/YbiS/YcfS/YnhG family protein | 0.22 | PfGW456L13_4860 | | Mlr7403 protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.35 | Psest_2334 | | Uncharacterized protein conserved in bacteria | 0.27 | Psest_1264 | | Uncharacterized protein conserved in bacteria | — | — |
| Pseudomonas sp. SVBP6 | 0.35 | COO64_RS09790 | | L,D-transpeptidase family protein | 0.22 | COO64_RS03960 | | tetratricopeptide repeat protein | low | > 93 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_08415 | | hypothetical protein | 0.22 | PS417_23135 | | GTP-binding protein | low | > 88 |
| Pseudomonas sp. DMC3 | 0.35 | GFF4626 | | putative L,D-transpeptidase YbiS | 0.22 | GFF4337 | | hypothetical protein | low | > 89 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS08365 | | L,D-transpeptidase family protein | 0.22 | PFLU_RS24790 | | tetratricopeptide repeat protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS08365 | | L,D-transpeptidase family protein | 0.22 | PFLU_RS24790 | | tetratricopeptide repeat protein | 0.32 | 32 |
| Erwinia amylovora T8 | 0.34 | OLJFJH_16675 | | L D-transpeptidase | 0.25 | OLJFJH_10460 | | Ancillary SecYEG translocon subunit | low | > 58 |
Not shown: 0 genomes with orthologs for CSW01_14325 only; 26 genomes with orthologs for CSW01_03950 only