Conservation of cofitness between CSW01_01025 and CSW01_03435 in Vibrio cholerae E7946 ATCC 55056

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01025 LysE family translocator 1.0 CSW01_03435 protease 0.72 1
Pseudomonas aeruginosa MRSN321 0.40 DY961_RS19750 LysE family translocator 0.65 DY961_RS13305 peptidase U32 family protein low > 100
Pseudomonas aeruginosa PUPa3 0.40 DQ20_RS53860 LysE family translocator 0.65 DQ20_RS48610 peptidase U32 family protein low > 101
Pseudomonas aeruginosa PA14 0.40 IKLFDK_07765 lysine transporter LysE 0.65 IKLFDK_20175 protease low > 98
Shewanella oneidensis MR-1 0.37 SO0765 threonine efflux protein, putative (NCBI ptt file) 0.62 SO1249 peptidase, U32 family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.35 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) 0.62 Shewana3_1065 peptidase U32 (RefSeq) low > 73
Shewanella loihica PV-4 0.34 Shew_1462 lysine exporter protein LysE/YggA (RefSeq) 0.62 Shew_2787 peptidase U32 (RefSeq) low > 60
Shewanella amazonensis SB2B 0.28 Sama_1550 threonine efflux protein, putative (RefSeq) 0.60 Sama_0998 U32 family peptidase (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.28 Psest_3222 Putative threonine efflux protein 0.65 Psest_0835 Collagenase and related proteases low > 67
Escherichia coli BW25113 0.27 b3823 rhtC threonine efflux system (NCBI) 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) low > 76
Escherichia coli ECRC101 0.27 MCAODC_04860 rhtC threonine export protein RhtC 0.74 MCAODC_08695 protease low > 87
Escherichia coli ECRC100 0.27 OKFHMN_14355 rhtC threonine export protein RhtC 0.74 OKFHMN_18175 protease low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_04228 Threonine efflux protein 0.74 OHPLBJKB_00542 putative protease YhbU low > 74
Escherichia coli ECRC102 0.27 NIAGMN_12110 rhtC threonine export protein RhtC 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU low > 80
Escherichia coli ECOR27 0.27 NOLOHH_06485 rhtC threonine export protein RhtC 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU low > 76
Escherichia coli ECRC99 0.27 KEDOAH_13795 rhtC threonine export protein RhtC 0.74 KEDOAH_09975 protease — —
Escherichia coli ECRC98 0.27 JDDGAC_17980 rhtC threonine export protein RhtC 0.74 JDDGAC_21800 protease low > 87
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_01110 Threonine efflux protein 0.63 GEMAOFIL_03433 putative protease YhbU low > 96
Escherichia coli ECRC62 0.27 BNILDI_05045 rhtC threonine export protein RhtC 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli Nissle 1917 0.27 ECOLIN_RS21940 threonine export protein RhtC 0.74 ECOLIN_RS18140 peptidase U32 family protein low > 55
Escherichia fergusonii Becca 0.27 EFB2_04814 Threonine efflux protein 0.74 EFB2_00665 putative protease YhbU low > 86
Escherichia coli BL21 0.27 ECD_03702 threonine efflux pump 0.74 ECD_03025 U32 peptidase family protein low > 61
Escherichia coli ECOR38 0.27 HEPCGN_13055 rhtC threonine export protein RhtC 0.74 HEPCGN_17050 protease low > 88
Pseudomonas simiae WCS417 0.27 PS417_04535 lysine transporter LysE 0.62 PS417_15755 protease low > 88
Rahnella sp. WP5 0.26 EX31_RS03810 LysE family translocator 0.74 EX31_RS08480 U32 family peptidase low > 89
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_15005 lysine transporter LysE 0.64 AO353_22050 protease low > 101
Serratia liquefaciens MT49 0.26 IAI46_03210 LysE family translocator 0.71 IAI46_02015 U32 family peptidase low > 87
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3245 L-lysine permease 0.63 Pf6N2E2_721 FIG139552: Putative protease low > 103
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2955 L-lysine permease 0.63 Pf1N1B4_5746 FIG139552: Putative protease low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF249 L-lysine permease 0.74 GFF1510 FIG139552: Putative protease low > 78
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein 0.72 EX28DRAFT_3207 Collagenase and related proteases low > 76
Klebsiella michiganensis M5al 0.26 BWI76_RS01250 threonine export protein RhtC 0.75 BWI76_RS24970 peptidase U32 low > 92
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_06930 lysine transporter LysE 0.63 AO356_25160 protease low > 104
Klebsiella pneumoniae MKP103 0.25 KDGMDA_09740 threonine export protein RhtC 0.75 KDGMDA_05840 protease low > 95
Pseudomonas sp. RS175 0.25 PFR28_03621 Threonine efflux protein 0.63 PFR28_02214 putative protease YhbU low > 88
Dickeya dadantii 3937 0.25 DDA3937_RS18300 LysE family translocator 0.73 DDA3937_RS03115 U32 family peptidase low > 74
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13505_RS15335 threonine export protein RhtC 0.71 PagCFBP13505_RS09060 U32 family peptidase low > 74
Dickeya dianthicola ME23 0.25 DZA65_RS21040 threonine export protein RhtC 0.73 DZA65_RS03285 U32 family peptidase low > 75
Pantoea sp. MT58 0.25 IAI47_18355 threonine export protein RhtC 0.72 IAI47_16965 U32 family peptidase low > 76
Pectobacterium carotovorum WPP14 0.25 HER17_RS02915 LysE family translocator 0.74 HER17_RS18160 U32 family peptidase low > 75
Pseudomonas sp. SVBP6 0.24 COO64_RS03395 LysE family translocator 0.64 COO64_RS14190 peptidase U32 family protein low > 93
Dickeya dianthicola 67-19 0.24 HGI48_RS20000 threonine export protein RhtC 0.73 HGI48_RS03290 U32 family peptidase low > 71
Enterobacter sp. TBS_079 0.23 MPMX20_04457 Threonine efflux protein 0.72 MPMX20_04062 putative protease YhbU low > 85
Sinorhizobium meliloti 1021 0.23 SMc02484 amino acid efflux transmembrane protein 0.42 SMa1291 Protease low > 103
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0068 Putative threonine efflux protein 0.59 B158DRAFT_2375 Collagenase and related proteases low > 40
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS21510 lysine transporter LysE 0.49 RR42_RS08775 protease low > 128
Rhodospirillum rubrum S1H 0.14 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.43 Rru_A2525 Peptidase U32 (NCBI) low > 58

Not shown: 15 genomes with orthologs for CSW01_01025 only; 14 genomes with orthologs for CSW01_03435 only