Conservation of cofitness between CSW01_00205 and CSW01_03430 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00205 hemolysin III family protein 1.0 CSW01_03430 U32 family peptidase 0.55 5
Enterobacter asburiae PDN3 0.76 EX28DRAFT_2950 channel protein, hemolysin III family 0.65 EX28DRAFT_3208 Collagenase and related proteases low > 76
Enterobacter sp. TBS_079 0.76 MPMX20_03758 hypothetical protein 0.64 MPMX20_04063 hypothetical protein 0.20 77
Klebsiella michiganensis M5al 0.76 BWI76_RS23840 hemolysin III family protein 0.65 BWI76_RS24975 U32 family peptidase low > 92
Dickeya dadantii 3937 0.74 DDA3937_RS03270 hemolysin III family protein 0.67 DDA3937_RS03110 U32 family peptidase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog 0.68 GFF1509 FIG139928: Putative protease low > 78
Escherichia coli BW25113 0.73 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) 0.67 b3159 yhbV orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC99 0.73 KEDOAH_08595 yqfA hemolysin III family protein 0.67 KEDOAH_09980 rlhA U32 family peptidase — —
Escherichia coli ECOR38 0.73 HEPCGN_18835 yqfA hemolysin III family protein 0.67 HEPCGN_17045 rlhA U32 family peptidase low > 87
Escherichia coli ECOR27 0.73 NOLOHH_11465 yqfA hemolysin III family protein 0.66 NOLOHH_09970 rlhA U32 family peptidase low > 75
Escherichia coli ECRC98 0.73 JDDGAC_23185 yqfA hemolysin III family protein 0.67 JDDGAC_21795 rlhA U32 family peptidase low > 86
Escherichia coli ECRC100 0.73 OKFHMN_19545 yqfA hemolysin III family protein 0.67 OKFHMN_18170 rlhA U32 family peptidase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00816 hypothetical protein 0.67 OHPLBJKB_00541 hypothetical protein low > 73
Escherichia fergusonii Becca 0.73 EFB2_01002 hypothetical protein 0.67 EFB2_00664 hypothetical protein low > 86
Escherichia coli ECRC62 0.73 BNILDI_10000 yqfA hemolysin III family protein 0.67 BNILDI_01560 rlhA U32 family peptidase low > 75
Escherichia coli ECRC102 0.73 NIAGMN_17310 yqfA hemolysin III family protein 0.67 NIAGMN_15930 rlhA U32 family peptidase — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS16150 hemolysin III family protein 0.67 ECOLIN_RS18145 U32 family peptidase low > 55
Escherichia coli ECRC101 0.73 MCAODC_10065 yqfA hemolysin III family protein 0.67 MCAODC_08690 rlhA U32 family peptidase low > 87
Escherichia coli BL21 0.73 ECD_02731 hemolysin III family HylIII inner membrane protein 0.67 ECD_03026 U32 peptidase family protein low > 61
Serratia liquefaciens MT49 0.72 IAI46_20775 hemolysin III family protein 0.66 IAI46_02010 U32 family peptidase low > 86
Rahnella sp. WP5 0.69 EX31_RS21610 hemolysin III family protein 0.68 EX31_RS08485 U32 family peptidase low > 89
Dickeya dianthicola 67-19 0.68 HGI48_RS03410 hemolysin III family protein 0.67 HGI48_RS03285 U32 family peptidase low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS03455 hemolysin III family protein 0.66 DZA65_RS03280 U32 family peptidase low > 75
Pantoea sp. MT58 0.67 IAI47_03795 hemolysin III family protein 0.63 IAI47_16970 U32 family peptidase low > 76
Pectobacterium carotovorum WPP14 0.64 HER17_RS17935 hemolysin III family protein 0.65 HER17_RS18165 U32 family peptidase low > 75
Shewanella loihica PV-4 0.48 Shew_2098 hemolysin III family channel protein (RefSeq) 0.46 Shew_2788 peptidase U32 (RefSeq) low > 60
Shewanella oneidensis MR-1 0.48 SO2447 channel protein, hemolysin III family subfamily (NCBI ptt file) 0.44 SO1248 hypothetical peptidase (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_1582 channel protein, hemolysin III family 0.39 B158DRAFT_2374 Collagenase and related proteases low > 40
Shewanella sp. ANA-3 0.46 Shewana3_1934 hemolysin III family channel protein (RefSeq) 0.44 Shewana3_1064 peptidase U32 (RefSeq) low > 73
Shewanella amazonensis SB2B 0.44 Sama_1862 hemolysin III family channel protein (RefSeq) 0.41 Sama_0997 peptidase U32 (RefSeq) low > 62
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4296 COG1272: Predicted membrane protein hemolysin III homolog 0.38 Ac3H11_4295 FIG139928: Putative protease low > 79
Pseudomonas sp. SVBP6 0.35 COO64_RS13640 hemolysin III family protein 0.47 COO64_RS14195 U32 family peptidase low > 93
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4629 COG1272: Predicted membrane protein hemolysin III homolog 0.45 Pf6N2E2_722 FIG139928: Putative protease low > 103
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_13560 hemolysin III 0.45 AO356_25165 protease low > 104
Pseudomonas sp. RS175 0.35 PFR28_04213 hypothetical protein 0.46 PFR28_02213 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2371 COG1272: Predicted membrane protein hemolysin III homolog 0.44 Pf1N1B4_5745 FIG139928: Putative protease low > 87
Pseudomonas simiae WCS417 0.34 PS417_26570 hemolysin III 0.46 PS417_15750 protease low > 88
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_08075 hemolysin III 0.43 AO353_22055 protease low > 101
Pseudomonas aeruginosa PA14 0.33 IKLFDK_29400 hemolysin III 0.44 IKLFDK_20170 U32 family peptidase low > 101
Pseudomonas stutzeri RCH2 0.32 Psest_3779 channel protein, hemolysin III family 0.44 Psest_0836 Collagenase and related proteases low > 67
Azospirillum brasilense Sp245 0.31 AZOBR_RS18955 DNA-binding protein 0.21 AZOBR_RS28240 protease low > 97
Rhodospirillum rubrum S1H 0.30 Rru_A0661 Hly-III related proteins (NCBI) 0.23 Rru_A2524 Peptidase U32 (NCBI) low > 58
Azospirillum sp. SherDot2 0.29 MPMX19_02364 hypothetical protein 0.24 MPMX19_03050 hypothetical protein low > 112

Not shown: 44 genomes with orthologs for CSW01_00205 only; 8 genomes with orthologs for CSW01_03430 only