Conservation of cofitness between CSW01_03335 and CSW01_03050 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03335 ribosome assembly RNA-binding protein YhbY 1.0 CSW01_03050 cytochrome b 0.55 5
Shewanella amazonensis SB2B 0.78 Sama_0952 RNA-binding protein (RefSeq) 0.73 Sama_3020 ubiquinol-cytochrome c reductase, cytochrome b (RefSeq) low > 62
Shewanella oneidensis MR-1 0.76 SO1195 conserved hypothetical protein TIGR00253 (NCBI ptt file) 0.73 SO0609 petB ubiquinol-cytochrome c reductase, cytochrome b (NCBI ptt file) — —
Shewanella sp. ANA-3 0.76 Shewana3_1021 hypothetical protein (RefSeq) 0.73 Shewana3_0602 cytochrome b/b6 domain-containing protein (RefSeq) low > 73
Shewanella loihica PV-4 0.76 Shew_2836 hypothetical protein (RefSeq) 0.73 Shew_0571 cytochrome b/b6 domain-containing protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.69 MIT1002_01863 RNA-binding protein 0.69 MIT1002_00815 Cytochrome b/c1 low > 70
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0633 putative RNA-binding protein, YhbY family 0.62 B158DRAFT_2101 Cytochrome b subunit of the bc complex low > 40
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS06570 ribosome assembly RNA-binding protein YhbY 0.52 ABZR86_RS09875 cytochrome bc complex cytochrome b subunit low > 74
Methylophilus sp. DMC18 0.50 GFF315 RNA-binding protein 0.58 GFF1578 Cytochrome b/c1 — —
Lysobacter sp. OAE881 0.49 ABIE51_RS06515 ribosome assembly RNA-binding protein YhbY 0.56 ABIE51_RS15435 cytochrome bc complex cytochrome b subunit low > 62
Marinobacter adhaerens HP15 0.48 HP15_3075 RNA-binding, CRM domain, prokaryote 0.65 HP15_546 ubiquinol-cytochrome c reductase, cytochrome b — —
Rhodanobacter sp000427505 FW510-R12 0.47 LRK53_RS12245 ribosome assembly RNA-binding protein YhbY 0.54 LRK53_RS14830 cytochrome bc complex cytochrome b subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.3126.1 FIG004454: RNA binding protein 0.57 Xcc-8004.2229.1 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) — —
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_08090 yhbY ribosome assembly RNA-binding protein YhbY 0.53 OKGIIK_03010 qcrB,petB cytochrome b — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS16675 ribosome assembly RNA-binding protein YhbY 0.55 LRK54_RS13770 cytochrome bc complex cytochrome b subunit — —
Rhodanobacter denitrificans MT42 0.45 LRK55_RS16400 ribosome assembly RNA-binding protein YhbY 0.55 LRK55_RS13485 cytochrome bc complex cytochrome b subunit low > 63
Pseudomonas sp. SVBP6 0.45 COO64_RS15225 yhbY ribosome assembly RNA-binding protein YhbY 0.67 COO64_RS11800 cytochrome bc complex cytochrome b subunit low > 93
Pseudomonas sp. S08-1 0.45 OH686_17095 RNA-binding protein YhbY 0.67 OH686_08385 Ubiquinol-cytochrome C reductase, cytochrome B subunit — —
Pseudomonas sp. BP01 0.44 JOY50_RS26780 YhbY family RNA-binding protein 0.66 JOY50_RS15210 cytochrome bc complex cytochrome b subunit low > 84
Pseudomonas putida KT2440 0.44 PP_4720 putative RNA binding protein 0.66 PP_1318 Cytochrome b low > 96
Pseudomonas segetis P6 0.43 ACVTMO_RS05900 yhbY ribosome assembly RNA-binding protein YhbY 0.68 ACVTMO_RS18965 cytochrome b — —
Pseudomonas aeruginosa PA14 0.42 IKLFDK_29830 ribosome assembly RNA-binding protein YhbY 0.68 IKLFDK_01940 cytochrome b low > 98
Pseudomonas aeruginosa PUPa3 0.42 DQ20_RS52515 yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA ribosome assembly RNA-binding protein YhbY 0.68 DQ20_RS56785 cytochrome bc complex cytochrome b subunit — —
Pseudomonas aeruginosa MRSN321 0.42 DY961_RS09520 yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA ribosome assembly RNA-binding protein YhbY 0.68 DY961_RS24325 cytochrome bc complex cytochrome b subunit — —
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_04955 RNA-binding protein 0.66 GEMAOFIL_01037 Cytochrome b — —
Pseudomonas fluorescens SBW25 0.42 PFLU_RS25865 YhbY family RNA-binding protein 0.66 PFLU_RS04200 cytochrome bc complex cytochrome b subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS25865 YhbY family RNA-binding protein 0.66 PFLU_RS04200 cytochrome bc complex cytochrome b subunit low > 109
Pseudomonas simiae WCS417 0.42 PS417_24025 RNA-binding protein 0.66 PS417_04160 cytochrome B — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1169 FIG004454: RNA binding protein 0.68 Pf1N1B4_961 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) — —
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_05615 RNA-binding protein 0.67 AO353_15250 cytochrome B — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3361 FIG004454: RNA binding protein 0.68 Pf6N2E2_5338 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) — —
Pseudomonas orientalis W4I3 0.41 QF045_RS26280 YhbY family RNA-binding protein 0.66 QF045_RS07160 cytochrome bc complex cytochrome b subunit low > 93
Pseudomonas sp. RS175 0.40 PFR28_00080 RNA-binding protein YhbY 0.68 PFR28_03605 Cytochrome b — —
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_07465 RNA-binding protein 0.68 AO356_17070 cytochrome B — —
Pseudomonas stutzeri RCH2 0.40 Psest_0971 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 0.65 Psest_3278 Cytochrome b subunit of the bc complex — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_5096 FIG004454: RNA binding protein 0.68 PfGW456L13_1635 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) low > 87
Pseudomonas sp. DMC3 0.39 GFF4980 RNA-binding protein 0.66 GFF4436 Cytochrome b low > 89

Not shown: 35 genomes with orthologs for CSW01_03335 only; 32 genomes with orthologs for CSW01_03050 only