| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_14325 | | peptidase | 1.0 | CSW01_02500 | | deoxyribonuclease | 0.61 | 2 |
| Shewanella loihica PV-4 | 0.50 | Shew_1006 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.55 | Shew_3223 | | deoxyribonuclease I (RefSeq) | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF3396 | | L,D-transpeptidase YcfS | 0.61 | GFF3047 | | Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) | low | > 78 |
| Klebsiella michiganensis M5al | 0.45 | BWI76_RS11200 | | transpeptidase | 0.63 | BWI76_RS24065 | | deoxyribonuclease I | low | > 92 |
| Rahnella sp. WP5 | 0.45 | EX31_RS13880 | | L,D-transpeptidase family protein | 0.61 | EX31_RS02655 | | deoxyribonuclease I | low | > 89 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_01794 | | putative L,D-transpeptidase YcfS | 0.63 | MPMX20_03803 | | Endonuclease-1 | low | > 85 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_21000 | ldtC | L,D-transpeptidase LdtC | 0.61 | NOLOHH_11155 | endA | deoxyribonuclease I | low | > 76 |
| Escherichia coli ECRC62 | 0.44 | BNILDI_19165 | ldtC | L,D-transpeptidase LdtC | 0.61 | BNILDI_09735 | endA | deoxyribonuclease I | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_02553 | | putative L,D-transpeptidase YcfS | 0.61 | OHPLBJKB_00773 | | Endonuclease-1 | low | > 74 |
| Escherichia coli BL21 | 0.44 | ECD_01109 | | L,D-transpeptidase linking Lpp to murein | 0.61 | ECD_02775 | | DNA-specific endonuclease I | low | > 61 |
| Escherichia coli ECRC101 | 0.44 | MCAODC_22835 | ldtC | L,D-transpeptidase LdtC | 0.60 | MCAODC_09805 | endA | deoxyribonuclease I | low | > 88 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_11175 | | L,D-transpeptidase family protein | 0.61 | IAI46_21380 | | deoxyribonuclease I | low | > 86 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_07135 | ldtC | L,D-transpeptidase LdtC | 0.60 | JDDGAC_22915 | endA | deoxyribonuclease I | low | > 87 |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_24280 | ldtC | L,D-transpeptidase LdtC | 0.60 | KEDOAH_08855 | endA | deoxyribonuclease I | — | — |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_24355 | ldtC | L,D-transpeptidase LdtC | 0.60 | NIAGMN_17050 | endA | deoxyribonuclease I | low | > 80 |
| Escherichia coli ECRC100 | 0.44 | OKFHMN_03475 | ldtC | L,D-transpeptidase LdtC | 0.60 | OKFHMN_19285 | endA | deoxyribonuclease I | low | > 79 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_1817 | | Uncharacterized protein conserved in bacteria | 0.62 | EX28DRAFT_2983 | | Endonuclease I | low | > 76 |
| Escherichia fergusonii Becca | 0.44 | EFB2_02862 | | putative L,D-transpeptidase YcfS | 0.60 | EFB2_00957 | | Endonuclease-1 | low | > 86 |
| Escherichia coli BW25113 | 0.44 | b1113 | ycfS | hypothetical protein (NCBI) | 0.61 | b2945 | endA | DNA-specific endonuclease I (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.44 | ECOLIN_RS06420 | | L,D-transpeptidase LdtC | 0.61 | ECOLIN_RS16385 | | deoxyribonuclease I | low | > 55 |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_24010 | ldtC | L,D-transpeptidase LdtC | 0.61 | HEPCGN_18590 | endA | deoxyribonuclease I | low | > 88 |
| Pantoea sp. MT58 | 0.43 | IAI47_10850 | | L,D-transpeptidase family protein | 0.61 | IAI47_03625 | | deoxyribonuclease I | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.43 | PagCFBP13505_RS17740 | | L,D-transpeptidase | 0.61 | PagCFBP13505_RS16070 | | deoxyribonuclease I | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS08950 | | L,D-transpeptidase family protein | 0.61 | HER17_RS02645 | | deoxyribonuclease I | 0.60 | 75 |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS13280 | | L,D-transpeptidase family protein | 0.62 | DZA65_RS19620 | | deoxyribonuclease I | low | > 75 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS12815 | | L,D-transpeptidase family protein | 0.61 | HGI48_RS18485 | | deoxyribonuclease I | low | > 71 |
| Klebsiella pneumoniae MKP103 | 0.42 | KDGMDA_24140 | | murein L D-transpeptidase | 0.63 | KDGMDA_04580 | | deoxyribonuclease I | low | > 95 |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS12750 | | L,D-transpeptidase family protein | 0.61 | DDA3937_RS18550 | | deoxyribonuclease I | low | > 74 |
| Shewanella amazonensis SB2B | 0.40 | Sama_0726 | | ErfK/YbiS/YcfS/YnhG (RefSeq) | 0.55 | Sama_0576 | | deoxyribonuclease I (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.38 | Shewana3_0844 | | ErfK/YbiS/YcfS/YnhG family protein (RefSeq) | 0.56 | Shewana3_3443 | | endonuclease I (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.37 | SO3748 | | LysM domain protein (NCBI ptt file) | 0.58 | SO0833 | endA | endonuclease I (NCBI ptt file) | low | > 76 |
| Pseudomonas sp. BP01 | 0.36 | JOY50_RS25815 | | L,D-transpeptidase family protein | 0.47 | JOY50_RS04250 | | endonuclease | low | > 84 |
| Pseudomonas sp. S08-1 | 0.36 | OH686_01780 | | L,D-transpeptidase | 0.45 | OH686_20125 | | Endonuclease I precursor | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_19015 | | hypothetical protein | 0.48 | AO353_20795 | | deoxyribonuclease | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_2474 | | ErfK/YbiS/YcfS/YnhG family protein | 0.48 | Pf6N2E2_158 | | Endonuclease I precursor (EC 3.1.21.1) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_292 | | ErfK/YbiS/YcfS/YnhG family protein | 0.48 | Pf1N1B4_6039 | | Endonuclease I precursor (EC 3.1.21.1) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | 0.47 | Psyr_2148 | | Deoxyribonuclease I | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_03215 | | hypothetical protein | 0.47 | AO356_00985 | | deoxyribonuclease | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_2070 | | ErfK/YbiS/YcfS/YnhG | 0.47 | Psyr_2148 | | Deoxyribonuclease I | 0.32 | 53 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_00960 | | hypothetical protein | 0.48 | PFR28_02739 | | Extracellular deoxyribonuclease | low | > 88 |
| Pseudomonas aeruginosa PA14 | 0.36 | IKLFDK_14500 | | YkuD domain-containing protein | 0.45 | IKLFDK_13855 | | deoxyribonuclease | low | > 100 |
| Pseudomonas putida KT2440 | 0.36 | PP_2320 | | conserved exported protein of unknown function | 0.46 | PP_2451 | | extracellular DNA endonuclease | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_2221 | | ErfK/YbiS/YcfS/YnhG family protein | 0.48 | PfGW456L13_3916 | | Endonuclease I precursor (EC 3.1.21.1) | low | > 87 |
| Pseudomonas segetis P6 | 0.35 | MPMX49_02652 | | putative L,D-transpeptidase YbiS | 0.45 | MPMX49_01589 | | Nuclease NucM | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.35 | Psest_2334 | | Uncharacterized protein conserved in bacteria | 0.51 | Psest_1274 | | Endonuclease I | low | > 67 |
| Pseudomonas sp. SVBP6 | 0.35 | COO64_RS09790 | | L,D-transpeptidase family protein | 0.47 | COO64_RS10310 | | endonuclease | low | > 93 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_08415 | | hypothetical protein | 0.49 | PS417_18420 | | deoxyribonuclease | low | > 88 |
| Pseudomonas lactucae CFBP13502 | 0.35 | GEMAOFIL_01816 | | hypothetical protein | 0.48 | GEMAOFIL_03914 | | Extracellular deoxyribonuclease | low | > 93 |
| Pseudomonas sp. DMC3 | 0.35 | GFF4626 | | putative L,D-transpeptidase YbiS | 0.50 | GFF893 | | Extracellular deoxyribonuclease | low | > 89 |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS08365 | | L,D-transpeptidase family protein | 0.49 | PFLU_RS20395 | | deoxyribonuclease | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS08365 | | L,D-transpeptidase family protein | 0.49 | PFLU_RS20395 | | deoxyribonuclease | low | > 109 |
| Erwinia amylovora T8 | 0.34 | OLJFJH_16675 | | L D-transpeptidase | 0.59 | OLJFJH_08580 | | deoxyribonuclease I | low | > 58 |
Not shown: 0 genomes with orthologs for CSW01_14325 only; 1 genomes with orthologs for CSW01_02500 only