Conservation of cofitness between CSW01_10145 and CSW01_02450 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10145 ribonuclease E 1.0 CSW01_02450 pyrroline-5-carboxylate reductase 0.68 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3365 Ribonuclease E (EC 3.1.26.12) 0.26 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS08610 ribonuclease E 0.69 HER17_RS03805 pyrroline-5-carboxylate reductase — —
Serratia liquefaciens MT49 0.44 IAI46_09750 ribonuclease E 0.69 IAI46_21415 pyrroline-5-carboxylate reductase — —
Enterobacter sp. TBS_079 0.43 MPMX20_01765 Ribonuclease E 0.27 MPMX20_00976 Pyrroline-5-carboxylate reductase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_02581 Ribonuclease E 0.27 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase low > 74
Rahnella sp. WP5 0.43 EX31_RS24395 ribonuclease E 0.65 EX31_RS02690 pyrroline-5-carboxylate reductase 0.68 24
Dickeya dianthicola 67-19 0.43 HGI48_RS13225 ribonuclease E 0.68 HGI48_RS17350 pyrroline-5-carboxylate reductase — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS06270 ribonuclease E 0.27 ECOLIN_RS02345 pyrroline-5-carboxylate reductase low > 55
Erwinia tracheiphila HP pepo 2.2 0.43 IJEDHG_00720 rne ribonuclease E 0.23 IJEDHG_26195 proC pyrroline-5-carboxylate reductase — —
Shewanella oneidensis MR-1 0.43 SO2785 rne ribonuclease E (NCBI ptt file) 0.57 SO3354 proC pyrroline-5-carboxylate reductase (NCBI ptt file) low > 76
Escherichia fergusonii Becca 0.43 EFB2_02890 Ribonuclease E 0.27 EFB2_03670 Pyrroline-5-carboxylate reductase low > 86
Shewanella sp. ANA-3 0.43 Shewana3_2567 RNAse E (RefSeq) 0.56 Shewana3_1193 pyrroline-5-carboxylate reductase (RefSeq) low > 73
Escherichia coli ECRC62 0.43 BNILDI_19310 rne ribonuclease E 0.27 BNILDI_22950 proC pyrroline-5-carboxylate reductase low > 75
Erwinia tracheiphila SCR3 0.43 LU632_RS14860 rne ribonuclease E 0.23 LU632_RS18995 proC pyrroline-5-carboxylate reductase low > 73
Dickeya dadantii 3937 0.43 DDA3937_RS13160 ribonuclease E 0.68 DDA3937_RS17305 pyrroline-5-carboxylate reductase low > 74
Escherichia coli BL21 0.43 ECD_01080 endoribonuclease; RNA-binding protein 0.27 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding low > 61
Klebsiella pneumoniae MKP103 0.43 KDGMDA_18655 ribonuclease E 0.27 KDGMDA_14250 pyrroline-5-carboxylate reductase low > 95
Escherichia coli ECOR38 0.43 HEPCGN_23860 rne ribonuclease E 0.27 HEPCGN_07250 proC pyrroline-5-carboxylate reductase low > 88
Escherichia coli BW25113 0.43 b1084 rne fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) 0.27 b0386 proC pyrroline-5-carboxylate reductase (NCBI) low > 76
Escherichia coli ECOR27 0.43 NOLOHH_21150 rne ribonuclease E 0.27 NOLOHH_01535 proC pyrroline-5-carboxylate reductase 0.52 16
Pantoea sp. MT58 0.43 IAI47_12110 ribonuclease E 0.26 IAI47_14945 pyrroline-5-carboxylate reductase low > 76
Escherichia coli ECRC100 0.43 OKFHMN_03620 rne ribonuclease E 0.27 OKFHMN_08610 proC pyrroline-5-carboxylate reductase low > 79
Escherichia coli ECRC101 0.43 MCAODC_22980 rne ribonuclease E 0.27 MCAODC_27835 proC pyrroline-5-carboxylate reductase low > 87
Escherichia coli ECRC98 0.43 JDDGAC_07280 rne ribonuclease E 0.27 JDDGAC_12265 proC pyrroline-5-carboxylate reductase low > 87
Escherichia coli ECRC99 0.43 KEDOAH_24135 rne ribonuclease E 0.27 KEDOAH_19355 proC pyrroline-5-carboxylate reductase — —
Escherichia coli ECRC102 0.43 NIAGMN_24210 rne ribonuclease E 0.27 NIAGMN_06665 proC pyrroline-5-carboxylate reductase low > 80
Dickeya dianthicola ME23 0.42 DZA65_RS13700 ribonuclease E 0.67 DZA65_RS18440 pyrroline-5-carboxylate reductase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_1846 ribonuclease, Rne/Rng family 0.27 EX28DRAFT_2585 pyrroline-5-carboxylate reductase — —
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS05225 ribonuclease E 0.26 PagCFBP13505_RS10205 pyrroline-5-carboxylate reductase low > 74
Klebsiella michiganensis M5al 0.41 BWI76_RS11040 ribonuclease E 0.27 BWI76_RS06170 pyrroline-5-carboxylate reductase — —
Pseudomonas sp. SVBP6 0.36 COO64_RS05850 rne ribonuclease E 0.36 COO64_RS12995 proC pyrroline-5-carboxylate reductase — —
Pseudomonas sp. RS175 0.35 PFR28_03019 Ribonuclease E 0.35 PFR28_04243 Pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_01410 ribonuclease E 0.36 AO353_08165 pyrroline-5-carboxylate reductase low > 101
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_04441 Ribonuclease E 0.37 GEMAOFIL_05483 Pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS23100 ribonuclease E 0.37 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens SBW25 0.35 PFLU_RS23100 ribonuclease E 0.37 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_20120 ribonuclease E 0.36 AO356_13420 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_461 Ribonuclease E (EC 3.1.26.12) 0.35 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Pseudomonas simiae WCS417 0.35 PS417_21485 ribonuclease E 0.36 PS417_26730 pyrroline-5-carboxylate reductase — —
Pseudomonas orientalis W4I3 0.35 QF045_RS23565 ribonuclease E 0.37 QF045_RS01130 pyrroline-5-carboxylate reductase low > 93
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5942 Ribonuclease E (EC 3.1.26.12) 0.35 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS14370 ribonuclease E/G 0.32 RALBFv3_RS05580 pyrroline-5-carboxylate reductase — —
Ralstonia solanacearum UW163 0.33 UW163_RS11835 ribonuclease E/G 0.32 UW163_RS08045 pyrroline-5-carboxylate reductase — —
Ralstonia solanacearum GMI1000 0.33 RS_RS05150 ribonuclease E 0.33 RS_RS13440 pyrroline-5-carboxylate reductase — —
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS14160 ribonuclease E 0.30 RR42_RS17360 pyrroline-5-carboxylate reductase — —
Ralstonia solanacearum PSI07 0.32 RPSI07_RS19090 ribonuclease E/G 0.32 RPSI07_RS11720 pyrroline-5-carboxylate reductase — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04339 RNAse E (EC 3.1.26.12) 0.35 H281DRAFT_04679 pyrroline-5-carboxylate reductase — —
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS02720 ribonuclease E 0.32 ABZR86_RS10425 pyrroline-5-carboxylate reductase low > 74

Not shown: 0 genomes with orthologs for CSW01_10145 only; 72 genomes with orthologs for CSW01_02450 only