Conservation of cofitness between CSW01_10710 and CSW01_01830 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10710 deferrochelatase 1.0 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.60 12
Serratia liquefaciens MT49 0.43 IAI46_18515 Dyp-type peroxidase 0.70 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Rahnella sp. WP5 0.42 EX31_RS20230 Dyp-type peroxidase 0.70 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 89
Dickeya dianthicola 67-19 0.41 HGI48_RS04395 Dyp-type peroxidase 0.69 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 71
Dickeya dianthicola ME23 0.41 DZA65_RS04310 Dyp-type peroxidase 0.69 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Dickeya dadantii 3937 0.41 DDA3937_RS04420 Dyp-type peroxidase 0.70 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Klebsiella michiganensis M5al 0.40 BWI76_RS20710 dyp-type peroxidase family protein 0.73 BWI76_RS02530 tRNA dimethylallyltransferase low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01291 putative deferrochelatase/peroxidase YfeX 0.72 OHPLBJKB_03871 tRNA dimethylallyltransferase — —
Escherichia coli BW25113 0.40 b2431 b2431 orf, hypothetical protein (VIMSS) 0.72 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) low > 76
Escherichia coli ECRC99 0.40 KEDOAH_06100 yfeX porphyrinogen peroxidase 0.71 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Klebsiella pneumoniae MKP103 0.40 KDGMDA_27550 peroxidase 0.73 KDGMDA_11030 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 95
Escherichia coli ECRC100 0.40 OKFHMN_22120 yfeX porphyrinogen peroxidase 0.71 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 79
Escherichia coli ECRC98 0.40 JDDGAC_26070 yfeX porphyrinogen peroxidase 0.71 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli ECRC102 0.40 NIAGMN_19890 yfeX porphyrinogen peroxidase 0.71 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Escherichia coli ECRC101 0.40 MCAODC_12650 yfeX porphyrinogen peroxidase 0.71 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Pectobacterium carotovorum WPP14 0.40 HER17_RS17230 Dyp-type peroxidase 0.71 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia fergusonii Becca 0.40 EFB2_01448 Dye-decolorizing peroxidase YfeX 0.71 EFB2_04364 tRNA dimethylallyltransferase low > 86
Escherichia coli ECOR38 0.40 HEPCGN_21295 yfeX porphyrinogen peroxidase 0.72 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 88
Enterobacter sp. TBS_079 0.40 MPMX20_03318 Dye-decolorizing peroxidase YfeX 0.71 MPMX20_00452 tRNA dimethylallyltransferase low > 85
Escherichia coli ECRC62 0.40 BNILDI_12665 yfeX porphyrinogen peroxidase 0.72 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli BL21 0.40 ECD_02331 porphyrinogen oxidase, cytoplasmic 0.72 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase low > 61
Escherichia coli Nissle 1917 0.40 ECOLIN_RS13940 porphyrinogen peroxidase 0.71 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 55
Escherichia coli ECOR27 0.40 NOLOHH_13800 yfeX porphyrinogen peroxidase 0.72 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0204 Dyp-type peroxidase family 0.71 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.71 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 78
Magnetospirillum magneticum AMB-1 0.39 AMB_RS03620 iron-dependent peroxidase 0.27 AMB_RS17735 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 64
Shewanella amazonensis SB2B 0.34 Sama_0670 melanin biosynthesis protein TyrA, putative (RefSeq) 0.62 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Shewanella oneidensis MR-1 0.33 SO0740 melanin biosynthesis protein TyrA, putative (NCBI ptt file) 0.65 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.32 Shew_0864 Dyp-type peroxidase family protein (RefSeq) 0.63 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Acinetobacter radioresistens SK82 0.32 MPMX26_00092 Dye-decolorizing peroxidase YfeX 0.42 MPMX26_01208 tRNA dimethylallyltransferase — —
Shewanella sp. ANA-3 0.32 Shewana3_3513 Dyp-type peroxidase family protein (RefSeq) 0.63 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS30665 peroxidase 0.47 BPHYT_RS03645 tRNA dimethylallyltransferase low > 109
Acinetobacter baumannii LAC-4 0.30 RR41_RS18200 Dyp-type peroxidase 0.41 RR41_RS07075 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.35 38
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_25350 peroxidase 0.62 AO353_13140 tRNA dimethylallyltransferase low > 101
Pseudomonas simiae WCS417 0.30 PS417_11115 peroxidase 0.60 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase low > 88
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_3869 Dyp-type peroxidase family 0.28 Ga0059261_0069 tRNA dimethylallyltransferase low > 68
Bacteroides ovatus ATCC 8483 0.29 BACOVA_00506 Dyp-type peroxidase family protein 0.27 BACOVA_05050 tRNA dimethylallyltransferase low > 96
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS01625 Dyp-type peroxidase 0.52 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Mycobacterium tuberculosis H37Rv 0.29 Rv0799c Conserved protein 0.21 Rv2727c Probable tRNA delta(2)-isopentenylpyrophosphate transferase MiaA (IPP transferase) (isopentenyl-diphosphate:tRNA isopentenyltransferase) (iptase) (IPPT) — —
Bacteroides thetaiotaomicron VPI-5482 0.28 BT1219 conserved hypothetical protein (NCBI ptt file) 0.27 BT4203 tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS13340 Dyp-type peroxidase 0.29 ABZR88_RS17470 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Paraburkholderia graminis OAS925 0.26 ABIE53_006344 putative iron-dependent peroxidase 0.49 ABIE53_000875 tRNA dimethylallyltransferase low > 113
Alteromonas macleodii MIT1002 0.26 MIT1002_00420 putative deferrochelatase/peroxidase YfeX 0.57 MIT1002_03789 tRNA dimethylallyltransferase — —
Pseudomonas sp. DMC3 0.19 GFF3728 Dye-decolorizing peroxidase YfeX 0.64 GFF3219 tRNA dimethylallyltransferase low > 89
Pseudomonas sp. RS175 0.19 PFR28_01310 Dye-decolorizing peroxidase YfeX 0.62 PFR28_05120 tRNA dimethylallyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_5683 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.62 Pf1N1B4_1413 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_2809 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.62 PfGW456L13_155 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_01290 peroxidase 0.63 AO356_08660 tRNA dimethylallyltransferase — —
Pseudomonas putida KT2440 0.17 PP_3248 Dyp-type peroxidase family protein 0.58 PP_4895 tRNA dimethylallyltransferase low > 96
Pseudomonas sp. BP01 0.17 JOY50_RS26550 Dyp-type peroxidase 0.59 JOY50_RS17225 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —

Not shown: 0 genomes with orthologs for CSW01_10710 only; 71 genomes with orthologs for CSW01_01830 only