Conservation of cofitness between CSW01_07625 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07625 sulfurtransferase FdhD 1.0 CSW01_01485 transcriptional regulator 0.80 6
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS16190 formate dehydrogenase accessory sulfurtransferase FdhD 0.26 ABZR87_RS18255 LacI family DNA-binding transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.48 RPSI07_RS13035 sufurtransferase FdhD 0.26 RPSI07_RS07575 LacI family DNA-binding transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.48 RS_RS11885 sufurtransferase FdhD 0.26 RS_RS24865 LacI family DNA-binding transcriptional regulator low > 80
Acidovorax sp. GW101-3H11 0.48 Ac3H11_3797 Formate dehydrogenase chain D (EC 1.2.1.2) 0.29 Ac3H11_3230 Gluconate utilization system Gnt-I transcriptional repressor low > 79
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS15950 formate dehydrogenase 0.26 RR42_RS22645 GntR family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS04335 sufurtransferase FdhD 0.24 RALBFv3_RS16125 GntR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS09335 sufurtransferase FdhD 0.24 UW163_RS16860 GntR family transcriptional regulator — —
Variovorax sp. OAS795 0.45 ABID97_RS07590 formate dehydrogenase accessory sulfurtransferase FdhD 0.29 ABID97_RS01205 LacI family DNA-binding transcriptional regulator low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF1188 Formate dehydrogenase chain D (EC 1.2.1.2) 0.30 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor low > 90
Azospirillum sp. SherDot2 0.44 MPMX19_00542 Sulfur carrier protein FdhD 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR low > 112
Azospirillum brasilense Sp245 0.42 AZOBR_RS05220 formate dehydrogenase 0.31 AZOBR_RS15720 LacI family transcription regulator — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_3282 formate dehydrogenase subunit FdhD (RefSeq) 0.27 Dshi_3322 transcriptional regulator, LacI family (RefSeq) low > 64
Xanthobacter sp. DMC5 0.12 GFF208 Sulfur carrier protein FdhD 0.31 GFF1533 HTH-type transcriptional regulator GntR — —
Rhizobium sp. OAE497 0.12 ABIE40_RS17840 formate dehydrogenase accessory sulfurtransferase FdhD 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Pantoea sp. MT58 0.12 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Pantoea agglomerans CFBP13505 P0401 0.12 PagCFBP13505_RS15775 formate dehydrogenase accessory sulfurtransferase FdhD 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR low > 74
Serratia liquefaciens MT49 0.12 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR 0.67 58
Escherichia coli Nissle 1917 0.11 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR low > 55
Escherichia fergusonii Becca 0.11 EFB2_04720 Sulfur carrier protein FdhD 0.52 EFB2_00382 HTH-type transcriptional regulator GntR 0.39 3
Sinorhizobium meliloti 1021 0.11 SMc03085 formate dehydrogenase accessory protein 0.29 SM_b20667 LacI family transcriptional regulator low > 103
Alteromonas macleodii MIT1002 0.11 MIT1002_01712 formate dehydrogenase accessory protein 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor low > 70
Escherichia coli ECRC102 0.11 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Escherichia coli ECOR38 0.11 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 88
Escherichia coli ECRC101 0.11 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.11 OHPLBJKB_04155 Sulfur carrier protein FdhD 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 74
Escherichia coli ECRC99 0.11 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC100 0.11 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Escherichia coli BW25113 0.11 b3895 fdhD formate dehydrogenase accessory protein (NCBI) 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECOR27 0.11 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 76
Escherichia coli BL21 0.11 ECD_03780 formate dehydrogenase formation protein 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli ECRC62 0.11 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC98 0.11 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 87
Paraburkholderia bryophila 376MFSha3.1 0.11 H281DRAFT_06437 FdhD protein 0.30 H281DRAFT_05920 transcriptional regulator, LacI family low > 103
Burkholderia phytofirmans PsJN 0.11 BPHYT_RS03240 formate dehydrogenase accessory protein FdhD 0.32 BPHYT_RS00410 LacI family transcription regulator low > 109
Dickeya dadantii 3937 0.10 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR low > 74
Erwinia amylovora T8 0.10 OLJFJH_05050 formate dehydrogenase accessory sulfurtransferase FdhD 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR low > 58
Castellaniella sp019104865 MT123 0.10 ABCV34_RS00240 formate dehydrogenase accessory sulfurtransferase FdhD 0.26 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator low > 48
Dickeya dianthicola ME23 0.10 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR low > 75
Dickeya dianthicola 67-19 0.10 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR low > 71
Variovorax sp. SCN45 0.10 GFF5642 Sulfur carrier protein FdhD 0.30 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor — —
Paraburkholderia sabiae LMG 24235 0.10 QEN71_RS02080 formate dehydrogenase accessory sulfurtransferase FdhD 0.29 QEN71_RS13585 LacI family DNA-binding transcriptional regulator low > 153
Rahnella sp. WP5 0.10 EX31_RS05780 formate dehydrogenase accessory sulfurtransferase FdhD 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Enterobacter sp. TBS_079 0.10 MPMX20_04574 Sulfur carrier protein FdhD 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR low > 85
Pseudomonas fluorescens FW300-N2E3 0.10 AO353_11830 formate dehydrogenase family accessory protein FdhD 0.33 AO353_03255 LacI family transcriptional regulator low > 101
Enterobacter asburiae PDN3 0.10 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family low > 76
Pseudomonas fluorescens GW456-L13 0.10 PfGW456L13_408 Formate dehydrogenase chain D (EC 1.2.1.2) 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Pseudomonas aeruginosa PA14 0.09 IKLFDK_27585 formate dehydrogenase accessory sulfurtransferase FdhD 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR low > 98
Pseudomonas sp. RS175 0.09 PFR28_04882 Sulfur carrier protein FdhD 0.34 PFR28_00593 HTH-type transcriptional regulator GntR low > 88
Pseudomonas aeruginosa MRSN321 0.09 DY961_RS11760 fdhD;go_component=formate formate dehydrogenase accessory sulfurtransferase FdhD 0.36 DY961_RS17990 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR low > 100
Pseudomonas aeruginosa PUPa3 0.09 DQ20_RS50350 fdhD;go_component=formate formate dehydrogenase accessory sulfurtransferase FdhD 0.36 DQ20_RS59230 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR low > 101
Pseudomonas fluorescens FW300-N1B4 0.09 Pf1N1B4_1673 Formate dehydrogenase chain D (EC 1.2.1.2) 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor low > 87

Not shown: 15 genomes with orthologs for CSW01_07625 only; 24 genomes with orthologs for CSW01_01485 only