Conservation of cofitness between CSW01_00645 and CSW01_01370 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00645 DUF484 domain-containing protein 1.0 CSW01_01370 mechanosensitive ion channel family protein 0.39 20
Shewanella sp. ANA-3 0.23 Shewana3_0392 hypothetical protein (RefSeq) 0.45 Shewana3_0117 MscS mechanosensitive ion channel (RefSeq) low > 73
Shewanella oneidensis MR-1 0.22 SO4307 conserved hypothetical protein (NCBI ptt file) 0.45 SO0121 hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.21 MIT1002_00158 hypothetical protein 0.39 MIT1002_03422 Miniconductance mechanosensitive channel low > 70
Shewanella amazonensis SB2B 0.21 Sama_3248 hypothetical protein (RefSeq) 0.44 Sama_3632 putative small-conductance mechanosensitive channel (RefSeq) low > 62
Erwinia amylovora T8 0.21 OLJFJH_06410 DUF484 domain-containing protein 0.54 OLJFJH_11020 miniconductance mechanosensitive channel low > 58
Erwinia tracheiphila SCR3 0.21 LU632_RS24140 DUF484 domain-containing protein 0.52 LU632_RS06755 mechanosensitive ion channel family protein — —
Erwinia tracheiphila HP pepo 2.2 0.21 IJEDHG_08785 DUF484 domain-containing protein 0.52 IJEDHG_16880 miniconductance mechanosensitive channel — —
Serratia liquefaciens MT49 0.21 IAI46_00720 DUF484 domain-containing protein 0.57 IAI46_04810 mechanosensitive ion channel low > 87
Pectobacterium carotovorum WPP14 0.20 HER17_RS01345 DUF484 domain-containing protein 0.56 HER17_RS16010 mechanosensitive ion channel low > 75
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_0184 Protein of unknown function DUF484 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_0184 Protein of unknown function DUF484 0.38 Psyr_3803 MscS Mechanosensitive ion channel low > 86
Pseudomonas fluorescens SBW25 0.19 PFLU_RS29275 DUF484 family protein 0.38 PFLU_RS22200 mechanosensitive ion channel family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS29275 DUF484 family protein 0.38 PFLU_RS22200 mechanosensitive ion channel family protein low > 109
Pseudomonas aeruginosa MRSN321 0.19 DY961_RS12280 DUF484 family protein 0.36 DY961_RS15580 mechanosensitive ion channel family protein low > 100
Pseudomonas aeruginosa PUPa3 0.19 DQ20_RS49845 DUF484 family protein 0.36 DQ20_RS41490 mechanosensitive ion channel family protein low > 101
Pseudomonas stutzeri RCH2 0.19 Psest_3766 Uncharacterized protein conserved in bacteria 0.44 Psest_1281 Small-conductance mechanosensitive channel low > 67
Pseudomonas aeruginosa PA14 0.19 IKLFDK_27055 DUF484 domain-containing protein 0.36 IKLFDK_17800 mechanosensitive ion channel protein MscS low > 98
Shewanella loihica PV-4 0.19 Shew_0324 hypothetical protein (RefSeq) 0.45 Shew_3752 MscS mechanosensitive ion channel (RefSeq) low > 60
Pseudomonas putida KT2440 0.18 PP_5229 conserved protein of unknown function 0.38 PP_4533 mechanosensitive channel of miniconductance low > 96
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_09045 hypothetical protein 0.39 AO353_18300 mechanosensitive ion channel protein MscS low > 101
Pseudomonas sp. BP01 0.18 JOY50_RS22605 DUF484 family protein 0.38 JOY50_RS01235 mechanosensitive ion channel family protein low > 84
Pseudomonas sp. SVBP6 0.18 COO64_RS01265 DUF484 family protein 0.38 COO64_RS21935 mechanosensitive ion channel family protein low > 93
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF238 Protein of unknown function DUF484 0.54 GFF4472 Uncharacterized protein ybdG low > 78
Enterobacter sp. TBS_079 0.17 MPMX20_04466 hypothetical protein 0.53 MPMX20_01129 Miniconductance mechanosensitive channel YbdG low > 85
Enterobacter asburiae PDN3 0.17 EX28DRAFT_4479 Uncharacterized protein conserved in bacteria 0.53 EX28DRAFT_2431 Small-conductance mechanosensitive channel low > 76
Klebsiella pneumoniae MKP103 0.17 KDGMDA_09695 DUF484 domain-containing protein 0.53 KDGMDA_15760 miniconductance mechanosensitive channel low > 95
Pseudomonas orientalis W4I3 0.17 QF045_RS01955 DUF484 family protein 0.38 QF045_RS22370 mechanosensitive ion channel family protein low > 93
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_2172 Protein of unknown function DUF484 0.38 Pf1N1B4_544 Small-conductance mechanosensitive channel low > 87
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_12730 hypothetical protein 0.38 AO356_04215 mechanosensitive ion channel protein MscS low > 104
Pseudomonas lactucae CFBP13502 0.17 GEMAOFIL_05656 hypothetical protein 0.38 GEMAOFIL_04250 Miniconductance mechanosensitive channel YbdG low > 96
Pseudomonas sp. DMC3 0.17 GFF369 hypothetical protein 0.39 GFF2354 Miniconductance mechanosensitive channel YbdG low > 89
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_843 Protein of unknown function DUF484 0.39 PfGW456L13_4452 Small-conductance mechanosensitive channel low > 87
Escherichia coli ECRC98 0.17 JDDGAC_18050 yigA Uncharacterized protein YigA 0.54 JDDGAC_11320 ybdG mechanosensitive ion channel YbdG low > 87
Escherichia coli ECRC102 0.17 NIAGMN_12180 yigA Uncharacterized protein YigA 0.54 NIAGMN_05730 ybdG mechanosensitive ion channel YbdG low > 80
Escherichia coli ECRC100 0.17 OKFHMN_14425 yigA Uncharacterized protein YigA 0.54 OKFHMN_07675 ybdG mechanosensitive ion channel YbdG low > 79
Escherichia coli ECRC99 0.17 KEDOAH_13725 yigA Uncharacterized protein YigA 0.54 KEDOAH_20295 ybdG mechanosensitive ion channel YbdG — —
Escherichia coli ECRC101 0.16 MCAODC_04930 yigA Uncharacterized protein YigA 0.54 MCAODC_26890 ybdG mechanosensitive ion channel YbdG low > 87
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_4417 Protein of unknown function DUF484 0.36 Pf6N2E2_2677 Small-conductance mechanosensitive channel low > 103
Escherichia coli ECOR27 0.16 NOLOHH_06555 yigA Uncharacterized protein YigA 0.54 NOLOHH_24055 ybdG mechanosensitive ion channel YbdG low > 76
Escherichia coli ECOR38 0.16 HEPCGN_13130 yigA Uncharacterized protein YigA 0.54 HEPCGN_00615 ybdG mechanosensitive ion channel YbdG low > 88
Escherichia coli BL21 0.16 ECD_03686 DUF484 family protein 0.54 ECD_00538 mechanosensitive channel protein, miniconductance low > 61
Escherichia coli ECRC62 0.16 BNILDI_04980 yigA Uncharacterized protein YigA 0.54 BNILDI_22065 ybdG mechanosensitive ion channel YbdG low > 75
Escherichia coli BW25113 0.16 b3810 yigA hypothetical protein (NCBI) 0.54 b0577 ybdG predicted mechanosensitive channel (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_04240 hypothetical protein 0.54 OHPLBJKB_03132 Miniconductance mechanosensitive channel YbdG low > 74
Escherichia coli Nissle 1917 0.16 ECOLIN_RS21870 DUF484 domain-containing protein 0.54 ECOLIN_RS03155 mechanosensitive ion channel YbdG — —
Escherichia fergusonii Becca 0.16 EFB2_04827 hypothetical protein 0.54 EFB2_03517 Miniconductance mechanosensitive channel YbdG low > 86
Pseudomonas sp. RS175 0.16 PFR28_04377 hypothetical protein 0.38 PFR28_00755 Miniconductance mechanosensitive channel YbdG low > 88
Klebsiella michiganensis M5al 0.16 BWI76_RS01205 DUF484 family protein 0.55 BWI76_RS07440 miniconductance mechanosensitive channel low > 92
Castellaniella sp019104865 MT123 0.15 ABCV34_RS13460 DUF484 family protein 0.37 ABCV34_RS03055 mechanosensitive ion channel domain-containing protein low > 48
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_0245 Uncharacterized protein conserved in bacteria 0.60 B158DRAFT_2238 Small-conductance mechanosensitive channel low > 40

Not shown: 20 genomes with orthologs for CSW01_00645 only; 13 genomes with orthologs for CSW01_01370 only