Conservation of cofitness between CSW01_09555 and CSW01_01285 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase 1.0 CSW01_01285 perosamine synthetase 0.80 8
Dickeya dadantii 3937 0.69 DDA3937_RS05765 tRNA-(ms[2]io[6]A)-hydroxylase 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Serratia liquefaciens MT49 0.65 IAI46_02330 tRNA-(ms[2]io[6]A)-hydroxylase 0.25 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 87
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS08940 tRNA hydroxylase 0.25 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Pantoea sp. MT58 0.63 IAI47_16820 tRNA-(ms[2]io[6]A)-hydroxylase 0.25 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Alteromonas macleodii MIT1002 0.63 MIT1002_02520 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 0.22 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase low > 70
Shewanella loihica PV-4 0.62 Shew_2514 tRNA--hydroxylase (RefSeq) 0.20 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF942 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.25 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) low > 78
Enterobacter sp. TBS_079 0.62 MPMX20_00558 hypothetical protein 0.24 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_3463 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_14135 tRNA-(ms[2]io[6]A)-hydroxylase 0.24 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 61
Shewanella amazonensis SB2B 0.59 Sama_1218 tRNA-hydroxylase (RefSeq) 0.27 Sama_2329 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) low > 62
Klebsiella pneumoniae MKP103 0.58 KDGMDA_11510 tRNA-(ms[2]io[6]A)-hydroxylase 0.24 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 95
Klebsiella michiganensis M5al 0.58 BWI76_RS03020 tRNA hydroxylase 0.23 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 92
Shewanella sp. ANA-3 0.57 Shewana3_2667 tRNA hydroxylase (RefSeq) 0.23 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) low > 73
Rahnella sp. WP5 0.40 EX31_RS22630 tRNA-(ms[2]io[6]A)-hydroxylase 0.24 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS54725 tRNA-(ms[2]io[6]A)-hydroxylase 0.25 DQ20_RS41895 arnB;go_function=transaminase UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 101
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS20645 tRNA-(ms[2]io[6]A)-hydroxylase 0.25 DY961_RS15250 arnB;go_function=transaminase UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 100
Marinobacter adhaerens HP15 0.35 HP15_2202 tRNA-(ms(2)io(6)a)-hydroxylase 0.23 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family — —
Pseudomonas aeruginosa PA14 0.34 IKLFDK_08660 tRNA-(ms[2]io[6]A)-hydroxylase 0.25 IKLFDK_18130 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 98
Pseudomonas sp. SVBP6 0.34 COO64_RS09940 tRNA-(ms[2]io[6]A)-hydroxylase 0.22 COO64_RS21480 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA low > 93
Pseudomonas sp. BP01 0.33 JOY50_RS12775 tRNA-(ms[2]io[6]A)-hydroxylase 0.22 JOY50_RS13135 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 84
Acinetobacter baumannii LAC-4 0.33 RR41_RS04875 tRNA-(ms[2]io[6]A)-hydroxylase 0.24 RR41_RS18630 LegC family aminotransferase — —
Pseudomonas simiae WCS417 0.32 PS417_14975 tRNA hydroxylase 0.21 PS417_27245 aminotransferase DegT low > 88
Pseudomonas sp. DMC3 0.32 GFF1701 hypothetical protein 0.21 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 89
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_22955 tRNA hydroxylase 0.25 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase low > 101
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_3375 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.37 PfGW456L13_4375 perosamine synthetase low > 87
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_03299 hypothetical protein 0.21 GEMAOFIL_05587 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_4567 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.22 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase low > 87
Pseudomonas orientalis W4I3 0.31 QF045_RS14985 tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE 0.21 QF045_RS01615 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 93
Pseudomonas stutzeri RCH2 0.31 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 0.22 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase — —
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_24405 tRNA hydroxylase 0.22 AO356_03965 aminotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_568 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.23 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase low > 103
Pseudomonas sp. RS175 0.31 PFR28_02373 hypothetical protein 0.23 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1728 tRNA--hydroxylase 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1728 tRNA--hydroxylase 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_0914 tRNA-(MS(2)IO(6)A)-hydroxylase-like 0.34 Synpcc7942_0056 rfbE perosamine synthetase low > 38
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS01640 tRNA-(ms[2]io[6]A)-hydroxylase 0.28 ABZR88_RS12735 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.16 CA264_05350 tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE 0.30 CA264_12460 aminotransferase DegT low > 74

Not shown: 8 genomes with orthologs for CSW01_09555 only; 61 genomes with orthologs for CSW01_01285 only