Conservation of cofitness between CSW01_01830 and CSW01_01195 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 1.0 CSW01_01195 ADP-heptose--LPS heptosyltransferase I 0.89 20
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3368 tRNA dimethylallyltransferase 0.11 EX28DRAFT_3878 lipopolysaccharide heptosyltransferase III, putative low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_00452 tRNA dimethylallyltransferase 0.10 MPMX20_00107 Lipopolysaccharide core heptosyltransferase RfaQ low > 85
Pectobacterium carotovorum WPP14 0.71 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.14 HER17_RS20785 putative lipopolysaccharide heptosyltransferase III low > 75
Dickeya dadantii 3937 0.70 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.14 DDA3937_RS20455 putative lipopolysaccharide heptosyltransferase III low > 74
Pantoea sp. MT58 0.70 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.13 IAI47_00660 putative lipopolysaccharide heptosyltransferase III low > 76
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS11180 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.13 PagCFBP13505_RS18685 putative lipopolysaccharide heptosyltransferase III low > 74
Dickeya dianthicola ME23 0.69 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.14 DZA65_RS00810 putative lipopolysaccharide heptosyltransferase III low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.14 HGI48_RS00755 putative lipopolysaccharide heptosyltransferase III 0.62 65
Erwinia tracheiphila SCR3 0.68 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.11 LU632_RS21950 rfaQ putative lipopolysaccharide heptosyltransferase III low > 73
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_06870 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.11 IJEDHG_07830 rfaQ putative lipopolysaccharide heptosyltransferase III — —
Shewanella oneidensis MR-1 0.65 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) 0.45 SO4678 heptosyl transferase, glycosyltransferase family 9 protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.63 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.43 Shew_3702 glycosyl transferase family protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.63 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.46 Shewana3_4100 glycosyl transferase family protein (RefSeq) — —
Shewanella amazonensis SB2B 0.62 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.43 Sama_0102 glycosyl transferase family protein (RefSeq) — —
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1951 tRNA dimethylallyltransferase 0.43 B158DRAFT_0664 ADP-heptose:LPS heptosyltransferase low > 40
Marinobacter adhaerens HP15 0.59 HP15_2500 tRNA delta(2)-isopentenylpyrophosphate transferase 0.41 HP15_438 lipopolysaccharide biosynthesis protein — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.40 ABZR86_RS06270 glycosyltransferase family 9 protein — —
Rhodanobacter sp000427505 FW510-R12 0.51 LRK53_RS09520 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.37 LRK53_RS08785 glycosyltransferase family 9 protein — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS08790 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.09 ABCV34_RS13305 lipopolysaccharide heptosyltransferase I — —
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_06625 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.40 OKGIIK_05620 rfaF ADP-heptose--LPS heptosyltransferase — —
Methylophilus sp. DMC18 0.50 GFF683 tRNA dimethylallyltransferase 0.11 GFF2769 hypothetical protein low > 43
Rhodanobacter denitrificans MT42 0.50 LRK55_RS00405 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.40 LRK55_RS01055 glycosyltransferase family 9 protein — —
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS00635 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.40 LRK54_RS01290 glycosyltransferase family 9 protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.3121.1 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.34 Xcc-8004.4025.1 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Dechlorosoma suillum PS 0.49 Dsui_1552 tRNA isopentenyltransferase MiaA 0.13 Dsui_0469 lipopolysaccharide heptosyltransferase III, putative — —
Paraburkholderia graminis OAS925 0.49 ABIE53_000875 tRNA dimethylallyltransferase 0.10 ABIE53_005251 ADP-heptose:LPS heptosyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04711 tRNA dimethylallyltransferase 0.11 H281DRAFT_03282 ADP-heptose:LPS heptosyltransferase — —
Lysobacter sp. OAE881 0.47 ABIE51_RS06535 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.38 ABIE51_RS14070 glycosyltransferase family 9 protein low > 62
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase 0.10 CCNA_01103 ADP-heptose--LPS heptosyltransferase — —
Caulobacter crescentus NA1000 0.26 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase 0.10 CCNA_01103 ADP-heptose--LPS heptosyltransferase — —

Not shown: 90 genomes with orthologs for CSW01_01830 only; 1 genomes with orthologs for CSW01_01195 only