Conservation of cofitness between CSW01_18820 and CSW01_01025 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18820 EamA/RhaT family transporter 1.0 CSW01_01025 LysE family translocator 0.57 16
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS23240 DMT family transporter 0.22 ABZR87_RS21900 LysE family transporter low > 80
Shewanella oneidensis MR-1 0.42 SO1091 membrane protein, putative (NCBI ptt file) 0.37 SO0765 threonine efflux protein, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_0924 hypothetical protein (RefSeq) 0.35 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) low > 73
Serratia liquefaciens MT49 0.39 IAI46_17860 DMT family transporter 0.26 IAI46_03210 LysE family translocator low > 87
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS35080 membrane protein 0.23 RR42_RS21510 lysine transporter LysE low > 128
Pectobacterium carotovorum WPP14 0.38 HER17_RS06975 DMT family transporter 0.25 HER17_RS02915 LysE family translocator low > 75
Pantoea agglomerans CFBP13505 P0401 0.37 PagCFBP13505_RS00180 DMT family transporter 0.25 PagCFBP13505_RS15335 threonine export protein RhtC low > 74
Pantoea sp. MT58 0.37 IAI47_06225 DMT family transporter 0.25 IAI47_18355 threonine export protein RhtC low > 76
Rahnella sp. WP5 0.36 EX31_RS19620 DMT family transporter 0.26 EX31_RS03810 LysE family translocator low > 89
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13445 hypothetical protein 0.26 AO353_15005 lysine transporter LysE low > 101
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1363 Permease of the drug/metabolite transporter (DMT) superfamily 0.26 Pf1N1B4_2955 L-lysine permease low > 87
Pseudomonas sp. SVBP6 0.33 COO64_RS18100 DMT family transporter 0.24 COO64_RS03395 LysE family translocator low > 93
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS25070 DMT family transporter 0.40 DY961_RS19750 LysE family translocator low > 100
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS57525 DMT family transporter 0.40 DQ20_RS53860 LysE family translocator low > 101
Pseudomonas aeruginosa PA14 0.33 IKLFDK_02675 EamA family transporter 0.40 IKLFDK_07765 lysine transporter LysE low > 98
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_101 Permease of the drug/metabolite transporter (DMT) superfamily 0.27 PfGW456L13_1618 L-lysine permease low > 87
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_00785 hypothetical protein 0.27 GEMAOFIL_01110 Threonine efflux protein low > 96
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4444 Protein of unknown function DUF6 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4444 Protein of unknown function DUF6 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) — —
Pseudomonas sp. DMC3 0.31 GFF3269 hypothetical protein 0.26 GFF4453 Threonine efflux protein low > 89
Erwinia amylovora T8 0.31 OLJFJH_11220 EamA family transporter 0.27 OLJFJH_01390 lysine transporter LysE low > 58
Pseudomonas orientalis W4I3 0.29 QF045_RS05790 DMT family transporter 0.26 QF045_RS07505 LysE family transporter low > 93
Pseudomonas simiae WCS417 0.27 PS417_02755 membrane protein 0.27 PS417_04535 lysine transporter LysE low > 88
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS02815 DMT family transporter 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS02815 DMT family transporter 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Rhizobium sp. OAE497 0.23 ABIE40_RS14810 DMT family transporter 0.19 ABIE40_RS07035 LysE family transporter low > 107
Sinorhizobium meliloti 1021 0.22 SMc00642 hypothetical protein 0.23 SMc02484 amino acid efflux transmembrane protein low > 103
Pseudomonas sp. S08-1 0.21 OH686_08025 Permease of the drug/metabolite transporter (DMT) superfamily 0.25 OH686_06335 L-lysine permease low > 80
Pseudomonas stutzeri RCH2 0.20 Psest_1063 Predicted permease, DMT superfamily 0.28 Psest_3222 Putative threonine efflux protein low > 67
Rhodospirillum rubrum S1H 0.19 Rru_A2900 Protein of unknown function DUF6, transmembrane (NCBI) 0.14 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) low > 58
Pseudomonas segetis P6 0.17 MPMX49_01301 hypothetical protein 0.41 MPMX49_02682 Threonine efflux protein low > 75
Klebsiella michiganensis M5al 0.13 BWI76_RS10350 EamA family transporter 0.26 BWI76_RS01250 threonine export protein RhtC low > 92
Klebsiella pneumoniae MKP103 0.13 KDGMDA_22215 EamA/RhaT family transporter 0.25 KDGMDA_09740 threonine export protein RhtC low > 95
Paraburkholderia sabiae LMG 24235 0.10 QEN71_RS34925 DMT family transporter 0.22 QEN71_RS00520 LysE family transporter low > 153
Pseudomonas fluorescens FW300-N2C3 0.10 AO356_22840 multidrug transporter 0.26 AO356_06930 lysine transporter LysE low > 104
Kangiella aquimarina DSM 16071 0.10 B158DRAFT_0155 Permeases of the drug/metabolite transporter (DMT) superfamily 0.23 B158DRAFT_0068 Putative threonine efflux protein low > 40
Shewanella loihica PV-4 0.10 Shew_0694 hypothetical protein (RefSeq) 0.34 Shew_1462 lysine exporter protein LysE/YggA (RefSeq) low > 60
Pseudomonas sp. RS175 0.10 PFR28_02476 putative amino-acid metabolite efflux pump 0.25 PFR28_03621 Threonine efflux protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_455 Permease of the drug/metabolite transporter (DMT) superfamily 0.26 Pf6N2E2_3245 L-lysine permease low > 103

Not shown: 35 genomes with orthologs for CSW01_18820 only; 22 genomes with orthologs for CSW01_01025 only