Conservation of cofitness between BPHYT_RS15595 and BPHYT_RS18310 in Burkholderia phytofirmans PsJN

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15595 ABC transporter 1.0 BPHYT_RS18310 malic enzyme 0.28 9
Paraburkholderia sabiae LMG 24235 0.93 QEN71_RS03115 ABC transporter ATP-binding protein 0.92 QEN71_RS28455 NADP-dependent malic enzyme low > 153
Paraburkholderia bryophila 376MFSha3.1 0.93 H281DRAFT_04060 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family 0.98 H281DRAFT_05846 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) low > 103
Paraburkholderia graminis OAS925 0.91 ABIE53_003283 branched-chain amino acid transport system ATP-binding protein 0.98 ABIE53_000015 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) low > 113
Castellaniella sp019104865 MT123 0.89 ABCV34_RS10515 ABC transporter ATP-binding protein 0.69 ABCV34_RS01715 NADP-dependent malic enzyme low > 48
Ralstonia solanacearum PSI07 0.81 RPSI07_RS12705 ABC transporter ATP-binding protein 0.66 RPSI07_RS14050 NADP-dependent malic enzyme low > 81
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS16965 ABC transporter 0.66 RR42_RS05210 malic enzyme low > 128
Ralstonia solanacearum UW163 0.81 UW163_RS08990 ABC transporter ATP-binding protein 0.66 UW163_RS10465 NADP-dependent malic enzyme — —
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS04680 ABC transporter ATP-binding protein 0.66 RALBFv3_RS03260 NADP-dependent malic enzyme low > 76
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS00300 ABC transporter ATP-binding protein 0.66 ABZR87_RS15110 NADP-dependent malic enzyme low > 80
Ralstonia solanacearum GMI1000 0.80 RS_RS12240 ABC transporter ATP-binding protein 0.67 RS_RS10650 NADP-dependent malic enzyme low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF780 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.65 GFF3306 NADP-dependent malic enzyme (EC 1.1.1.40) low > 90
Acidovorax sp. GW101-3H11 0.73 Ac3H11_1693 ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 1 (from data) 0.64 Ac3H11_1079 NADP-dependent malic enzyme (EC 1.1.1.40) 0.39 46
Variovorax sp. SCN45 0.72 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) 0.65 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) low > 127
Variovorax sp. OAS795 0.72 ABID97_RS07850 ABC transporter ATP-binding protein 0.64 ABID97_RS22340 NADP-dependent malic enzyme low > 91
Serratia liquefaciens MT49 0.64 IAI46_13095 ABC transporter ATP-binding protein 0.63 IAI46_18585 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Klebsiella michiganensis M5al 0.63 BWI76_RS07270 ABC transporter ATP-binding protein 0.63 BWI76_RS20830 bifunctional malic enzyme oxidoreductase/phosphotransacetylase low > 92
Enterobacter asburiae PDN3 0.63 EX28DRAFT_1076 ABC-type branched-chain amino acid transport systems, ATPase component 0.63 EX28DRAFT_0198 Malic enzyme low > 76
Dechlorosoma suillum PS 0.61 Dsui_0627 ABC-type branched-chain amino acid transport systems, ATPase component 0.67 Dsui_0543 malic enzyme low > 51
Azospirillum sp. SherDot2 0.49 MPMX19_02064 Lipopolysaccharide export system ATP-binding protein LptB 0.57 MPMX19_04254 NADP-dependent malic enzyme low > 112
Dickeya dadantii 3937 0.48 DDA3937_RS18210 ABC transporter ATP-binding protein 0.63 DDA3937_RS04355 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 74
Magnetospirillum magneticum AMB-1 0.47 AMB_RS08465 ABC transporter ATP-binding protein 0.57 AMB_RS03695 NADP-dependent malic enzyme low > 64
Azospirillum brasilense Sp245 0.46 AZOBR_RS32405 ABC transporter 0.56 AZOBR_RS21145 NADP-dependent malic enzyme low > 97
Rhodopseudomonas palustris CGA009 0.46 TX73_019720 ABC transporter ATP-binding protein 0.52 TX73_015740 NADP-dependent malic enzyme low > 86
Rahnella sp. WP5 0.45 EX31_RS14790 ABC transporter ATP-binding protein 0.64 EX31_RS20275 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 89
Pectobacterium carotovorum WPP14 0.45 HER17_RS00510 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.64 HER17_RS17280 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Enterobacter sp. TBS_079 0.45 MPMX20_04331 Lipopolysaccharide export system ATP-binding protein LptB 0.63 MPMX20_03324 NADP-dependent malic enzyme low > 85
Dickeya dianthicola 67-19 0.45 HGI48_RS20715 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.62 HGI48_RS04345 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF551 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.63 GFF2198 NADP-dependent malic enzyme (EC 1.1.1.40) low > 78
Escherichia coli ECRC98 0.44 JDDGAC_20385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 JDDGAC_25950 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Escherichia coli BW25113 0.44 b3455 livG leucine/isoleucine/valine transporter subunit (NCBI) 0.63 b2463 maeB malic enzyme (NCBI) low > 76
Escherichia coli BL21 0.44 ECD_03304 branched-chain amino acid ABC transporter ATPase 0.63 ECD_02354 malic enzyme: putative oxidoreductase/phosphotransacetylase low > 61
Escherichia fergusonii Becca 0.44 EFB2_00367 Lipopolysaccharide export system ATP-binding protein LptB 0.63 EFB2_01425 NADP-dependent malic enzyme low > 86
Escherichia coli ECRC102 0.44 NIAGMN_14525 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 NIAGMN_19775 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS19760 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 ECOLIN_RS14055 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00248 Lipopolysaccharide export system ATP-binding protein LptB 0.63 OHPLBJKB_01268 NADP-dependent malic enzyme low > 73
Escherichia coli ECOR38 0.44 HEPCGN_15575 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 HEPCGN_21175 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 87
Escherichia coli ECRC62 0.44 BNILDI_02955 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 BNILDI_12495 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Escherichia coli ECRC99 0.44 KEDOAH_11385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 KEDOAH_06215 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC101 0.44 MCAODC_07285 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 MCAODC_12535 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 87
Escherichia coli ECOR27 0.44 NOLOHH_08550 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 NOLOHH_13685 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Agrobacterium fabrum C58 0.44 Atu5525 ABC transporter nucleotide binding/ATPase (branched chain amino acid) 0.55 Atu1652 NADP-dependent malic enzyme — —
Escherichia coli ECRC100 0.44 OKFHMN_16755 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 0.63 OKFHMN_22005 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 80
Bosea sp. OAE506 0.41 ABIE41_RS20710 ABC transporter ATP-binding protein 0.54 ABIE41_RS21715 NADP-dependent malic enzyme — —
Sinorhizobium meliloti 1021 0.41 SMc01949 high-affinity branched-chain amino acid ABC transporter ATP-binding protein 0.54 SMc00169 malic enzyme low > 103
Rhizobium sp. OAE497 0.41 ABIE40_RS14705 ABC transporter ATP-binding protein 0.55 ABIE40_RS10450 NADP-dependent malic enzyme low > 107
Dinoroseobacter shibae DFL-12 0.40 Dshi_0375 ABC transporter related (RefSeq) 0.52 Dshi_0826 malic protein NAD-binding (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.39 PGA1_c32620 high-affinity branched-chain amino acid transport ATP-binding protein 0.54 PGA1_c11910 Malate dehydrogenase (decarboxylating) (EC 1.1.1.39) (from data) low > 62

Not shown: 22 genomes with orthologs for BPHYT_RS15595 only; 21 genomes with orthologs for BPHYT_RS18310 only