Conservation of cofitness between BPHYT_RS15895 and BPHYT_RS14840 in Burkholderia phytofirmans PsJN

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15895 transglutaminase 1.0 BPHYT_RS14840 lytic transglycosylase 0.32 4
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04115 Regulator of sirC expression, contains transglutaminase-like and TPR domains 0.92 H281DRAFT_03910 membrane-bound lytic murein transglycosylase B low > 103
Paraburkholderia graminis OAS925 0.97 ABIE53_003350 regulator of sirC expression with transglutaminase-like and TPR domain 0.89 ABIE53_003143 membrane-bound lytic murein transglycosylase B low > 113
Paraburkholderia sabiae LMG 24235 0.89 QEN71_RS02805 SirB1 family protein 0.80 QEN71_RS04140 lytic murein transglycosylase B low > 153
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS00860 SirB1 family protein 0.51 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Ralstonia solanacearum GMI1000 0.61 RS_RS12825 transglutaminase 0.51 RS_RS04565 lytic murein transglycosylase B low > 80
Ralstonia solanacearum PSI07 0.61 RPSI07_RS12095 transglutaminase 0.51 RPSI07_RS19640 lytic murein transglycosylase B low > 81
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05205 transglutaminase 0.51 RALBFv3_RS13830 lytic murein transglycosylase B low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS08420 transglutaminase 0.51 UW163_RS15980 lytic murein transglycosylase B — —
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS17195 transglutaminase 0.52 RR42_RS04540 lytic transglycosylase low > 128
Variovorax sp. OAS795 0.49 ABID97_RS08655 tetratricopeptide repeat protein 0.33 ABID97_RS19915 lytic murein transglycosylase B low > 91
Variovorax sp. SCN45 0.49 GFF3931 Protein sirB1 0.35 GFF2666 Membrane-bound lytic murein transglycosylase B low > 127
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1327 Protein sirB1 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3424 Protein sirB1 0.32 GFF5533 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 90
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS06985 transglutaminase 0.36 HSERO_RS04945 murein transglycosylase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.1134.1 Protein sirB1 0.23 Xcc-8004.904.1 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) — —
Erwinia tracheiphila SCR3 0.21 LU632_RS10745 sirB1 invasion regulator SirB1 0.25 LU632_RS15745 mltB lytic murein transglycosylase B low > 74
Dickeya dadantii 3937 0.19 DDA3937_RS10980 tetratricopeptide repeat-containing protein 0.25 DDA3937_RS03745 lytic murein transglycosylase B low > 74
Dickeya dianthicola ME23 0.18 DZA65_RS11390 tetratricopeptide repeat-containing protein 0.25 DZA65_RS03910 lytic murein transglycosylase B low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS10930 tetratricopeptide repeat-containing protein 0.25 HGI48_RS03780 lytic murein transglycosylase B — —
Escherichia fergusonii Becca 0.18 EFB2_02713 hypothetical protein 0.26 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Rahnella sp. WP5 0.18 EX31_RS07300 tetratricopeptide repeat-containing protein 0.25 EX31_RS07810 lytic murein transglycosylase B low > 89
Escherichia coli Nissle 1917 0.18 ECOLIN_RS07335 invasion regulator SirB1 0.27 ECOLIN_RS27170 lytic murein transglycosylase B — —
Escherichia coli BL21 0.17 ECD_01189 transglutaminase-like TPR-repeat protein 0.26 ECD_02551 membrane-bound lytic murein transglycosylase B low > 61
Pseudomonas putida KT2440 0.17 PP_4618 conserved protein of unknown function 0.29 PP_4805 membrane-bound lytic murein transglycosylase B low > 96
Escherichia coli BW25113 0.17 b1214 ychA predicted transcriptional regulator (NCBI) 0.26 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.17 HER17_RS10495 invasion regulator SirB1 0.25 HER17_RS16185 lytic murein transglycosylase B low > 75
Pantoea sp. MT58 0.17 IAI47_11255 tetratricopeptide repeat-containing protein 0.26 IAI47_04275 lytic murein transglycosylase B — —
Serratia liquefaciens MT49 0.17 IAI46_10295 tetratricopeptide repeat-containing protein 0.27 IAI46_18155 lytic murein transglycosylase B low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF2771 FIG002708: Protein SirB1 0.26 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Klebsiella michiganensis M5al 0.16 BWI76_RS17420 hypothetical protein 0.27 BWI76_RS22210 murein transglycosylase B low > 92
Enterobacter asburiae PDN3 0.16 EX28DRAFT_0833 Uncharacterized conserved protein 0.26 EX28DRAFT_2790 lytic murein transglycosylase B low > 76
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_1022 Protein sirB1 0.29 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_4959 Protein sirB1 0.29 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas sp. S08-1 0.15 OH686_18730 hypothetical protein 0.29 OH686_09310 lytic murein transglycosylase B low > 80
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_16840 hypothetical protein 0.31 AO356_15320 lytic transglycosylase low > 104
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_5293 Protein sirB1 0.30 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens SBW25 0.14 PFLU_RS05105 tetratricopeptide repeat protein 0.29 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS05105 tetratricopeptide repeat protein 0.29 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_15565 hypothetical protein 0.30 AO353_06465 lytic transglycosylase low > 101
Pseudomonas simiae WCS417 0.14 PS417_05035 hypothetical protein 0.29 PS417_24715 lytic transglycosylase low > 88
Pseudomonas sp. RS175 0.13 PFR28_00224 hypothetical protein 0.31 PFR28_03866 Membrane-bound lytic murein transglycosylase B low > 88

Not shown: 17 genomes with orthologs for BPHYT_RS15895 only; 10 genomes with orthologs for BPHYT_RS14840 only