Conservation of cofitness between BBR_RS19470 and BBR_RS16970 in Bifidobacterium breve UCC2003

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bifidobacterium breve UCC2003 1.0 BBR_RS19470 succinyl-diaminopimelate desuccinylase 1.0 BBR_RS16970 phosphoglycerate dehydrogenase 0.88 11
Klebsiella michiganensis M5al 0.12 BWI76_RS10270 acetylornithine deacetylase 0.46 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase low > 92
Rhizobium sp. OAE497 0.12 ABIE40_RS24525 acetylornithine deacetylase 0.44 ABIE40_RS30040 phosphoglycerate dehydrogenase low > 107
Pseudomonas simiae WCS417 0.11 PS417_18910 acetylornithine deacetylase 0.45 PS417_27040 3-phosphoglycerate dehydrogenase low > 88
Azospirillum sp. SherDot2 0.11 MPMX19_03397 Acetylornithine deacetylase 0.45 MPMX19_00753 D-3-phosphoglycerate dehydrogenase — —
Pseudomonas putida KT2440 0.11 PP_3571 putative Acetylornithine deacetylase 0.45 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase low > 96
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_25400 acetylornithine deacetylase 0.45 AO356_10300 3-phosphoglycerate dehydrogenase low > 104
Azospirillum brasilense Sp245 0.11 AZOBR_RS30425 acetylornithine deacetylase 0.44 AZOBR_RS10940 3-phosphoglycerate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.11 AO353_29125 acetylornithine deacetylase 0.45 AO353_08510 3-phosphoglycerate dehydrogenase low > 101
Pseudomonas fluorescens SBW25-INTG 0.10 PFLU_RS20950 acetylornithine deacetylase 0.45 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.10 PFLU_RS20950 acetylornithine deacetylase 0.45 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pectobacterium carotovorum WPP14 0.10 HER17_RS15310 succinyl-diaminopimelate desuccinylase 0.45 HER17_RS02725 phosphoglycerate dehydrogenase — —
Erwinia tracheiphila SCR3 0.10 LU632_RS08355 dapE succinyl-diaminopimelate desuccinylase 0.45 LU632_RS05855 serA phosphoglycerate dehydrogenase — —
Escherichia fergusonii Becca 0.10 EFB2_01416 Succinyl-diaminopimelate desuccinylase 0.46 EFB2_00990 D-3-phosphoglycerate dehydrogenase — —
Escherichia coli ECRC62 0.10 BNILDI_12445 dapE succinyl-diaminopimelate desuccinylase 0.46 BNILDI_09905 serA phosphoglycerate dehydrogenase — —
Escherichia coli BW25113 0.10 b2472 dapE succinyl-diaminopimelate desuccinylase (NCBI) 0.46 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) — —
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_1339 Acetylornithine deacetylase (EC 3.5.1.16) 0.45 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 103
Escherichia coli HS(pFamp)R (ATCC 700891) 0.10 OHPLBJKB_01259 Succinyl-diaminopimelate desuccinylase 0.46 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase — —
Escherichia coli BL21 0.10 ECD_02363 N-succinyl-diaminopimelate deacylase 0.46 ECD_02744 D-3-phosphoglycerate dehydrogenase — —
Escherichia coli ECOR27 0.10 NOLOHH_13635 dapE succinyl-diaminopimelate desuccinylase 0.46 NOLOHH_11370 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECRC100 0.10 OKFHMN_21955 dapE succinyl-diaminopimelate desuccinylase 0.46 OKFHMN_19460 serA phosphoglycerate dehydrogenase — —
Escherichia coli Nissle 1917 0.10 ECOLIN_RS14105 succinyl-diaminopimelate desuccinylase 0.46 ECOLIN_RS16210 phosphoglycerate dehydrogenase — —
Escherichia coli ECRC99 0.10 KEDOAH_06265 dapE succinyl-diaminopimelate desuccinylase 0.46 KEDOAH_08680 serA phosphoglycerate dehydrogenase — —
Enterobacter sp. TBS_079 0.10 MPMX20_03333 Succinyl-diaminopimelate desuccinylase 0.45 MPMX20_03771 D-3-phosphoglycerate dehydrogenase — —
Escherichia coli ECRC102 0.10 NIAGMN_19725 dapE succinyl-diaminopimelate desuccinylase 0.46 NIAGMN_17225 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECRC98 0.10 JDDGAC_25900 dapE succinyl-diaminopimelate desuccinylase 0.46 JDDGAC_23100 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECRC101 0.10 MCAODC_12485 dapE succinyl-diaminopimelate desuccinylase 0.46 MCAODC_09980 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECOR38 0.10 HEPCGN_21125 dapE succinyl-diaminopimelate desuccinylase 0.46 HEPCGN_18760 serA phosphoglycerate dehydrogenase — —
Serratia liquefaciens MT49 0.10 IAI46_18740 succinyl-diaminopimelate desuccinylase 0.45 IAI46_20900 phosphoglycerate dehydrogenase — —
Enterobacter asburiae PDN3 0.10 EX28DRAFT_0189 succinyldiaminopimelate desuccinylase (EC 3.5.1.18) 0.46 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pantoea sp. MT58 0.10 IAI47_05300 succinyl-diaminopimelate desuccinylase 0.45 IAI47_03725 phosphoglycerate dehydrogenase — —
Marinobacter adhaerens HP15 0.09 HP15_1159 succinyl-diaminopimelate desuccinylase 0.46 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein — —
Pseudomonas syringae pv. syringae B728a 0.09 Psyr_0771 acetylornithine deacetylase 0.45 Psyr_4852 D-3-phosphoglycerate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.09 Psyr_0771 acetylornithine deacetylase 0.45 Psyr_4852 D-3-phosphoglycerate dehydrogenase low > 86
Acidovorax sp. GW101-3H11 0.09 Ac3H11_4519 Acetylornithine deacetylase (EC 3.5.1.16) 0.46 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 79
Cupriavidus basilensis FW507-4G11 0.09 RR42_RS07840 acetylornithine deacetylase 0.42 RR42_RS27010 D-3-phosphoglycerate dehydrogenase low > 128
Pseudomonas fluorescens FW300-N1B4 0.09 Pf1N1B4_4930 Acetylornithine deacetylase (EC 3.5.1.16) 0.45 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.08 GFF4550 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) 0.47 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Shewanella amazonensis SB2B 0.08 Sama_1647 succinyl-diaminopimelate desuccinylase (RefSeq) 0.46 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) — —
Rhodanobacter denitrificans FW104-10B01 0.08 LRK54_RS14270 succinyl-diaminopimelate desuccinylase 0.46 LRK54_RS03185 phosphoglycerate dehydrogenase — —
Rhodanobacter denitrificans MT42 0.08 LRK55_RS13990 succinyl-diaminopimelate desuccinylase 0.46 LRK55_RS02935 phosphoglycerate dehydrogenase — —
Pseudomonas sp. S08-1 0.07 OH686_06560 succinyl-diaminopimelate desuccinylase 0.46 OH686_11280 D-3-phosphoglycerate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.07 PfGW456L13_4721 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) 0.45 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Acinetobacter radioresistens SK82 0.06 MPMX26_02507 Succinyl-diaminopimelate desuccinylase 0.48 MPMX26_02773 D-3-phosphoglycerate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.06 CSW01_10735 succinyl-diaminopimelate desuccinylase 0.49 CSW01_12555 phosphoglycerate dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.06 OKGIIK_03135 dapE succinyl-diaminopimelate desuccinylase 0.47 OKGIIK_10055 serA phosphoglycerate dehydrogenase — —

Not shown: 21 genomes with orthologs for BBR_RS19470 only; 20 genomes with orthologs for BBR_RS16970 only