Conservation of cofitness between BBR_RS15810 and BBR_RS15790 in Bifidobacterium breve UCC2003

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bifidobacterium breve UCC2003 1.0 BBR_RS15810 tryptophan synthase subunit alpha 1.0 BBR_RS15790 ATP phosphoribosyltransferase 0.26 18
Mycobacterium tuberculosis H37Rv 0.40 Rv1613 Probable tryptophan synthase, alpha subunit TrpA 0.49 Rv2121c ATP phosphoribosyltransferase HisG — —
Methanococcus maripaludis S2 0.27 MMP_RS05185 tryptophan synthase subunit alpha 0.24 MMP_RS04910 ATP phosphoribosyltransferase — —
Methanococcus maripaludis JJ 0.26 MMJJ_RS09195 tryptophan synthase subunit alpha 0.24 MMJJ_RS00225 ATP phosphoribosyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS10660 tryptophan synthase subunit alpha 0.27 ABZR88_RS06885 ATP phosphoribosyltransferase — —
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_2430 tryptophan synthase, alpha chain (EC 4.2.1.20) 0.13 B158DRAFT_2287 ATP phosphoribosyltransferase low > 40
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS00120 tryptophan synthase subunit alpha 0.25 HMPREF1078_RS02455 ATP phosphoribosyltransferase low > 61
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS21075 tryptophan synthase subunit alpha 0.23 ABI39_RS11830 ATP phosphoribosyltransferase 0.71 42
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS07200 tryptophan synthase subunit alpha 0.24 HMPREF1058_RS15870 ATP phosphoribosyltransferase 0.93 13
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS15350 tryptophan synthase subunit alpha 0.25 HMPREF1181_RS04865 ATP phosphoribosyltransferase low > 56
Shewanella oneidensis MR-1 0.23 SO3024 trpA tryptophan synthase, alpha subunit (NCBI ptt file) 0.20 SO2074 hisG ATP phosphoribosyltransferase (NCBI ptt file) 0.91 29
Serratia liquefaciens MT49 0.22 IAI46_14045 tryptophan synthase subunit alpha 0.21 IAI46_08215 ATP phosphoribosyltransferase low > 86
Bacteroides thetaiotaomicron VPI-5482 0.22 BT0527 tryptophan synthase alpha chain (NCBI ptt file) 0.25 BT0200 ATP phosphoribosyltransferase (NCBI ptt file) 0.75 32
Shewanella sp. ANA-3 0.22 Shewana3_1515 trpA tryptophan synthase subunit alpha (RefSeq) 0.21 Shewana3_1854 hisG ATP phosphoribosyltransferase (RefSeq) low > 73
Bacteroides ovatus ATCC 8483 0.22 BACOVA_03785 tryptophan synthase, alpha subunit 0.23 BACOVA_01235 ATP phosphoribosyltransferase 0.96 9
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_05925 tryptophan synthase subunit alpha 0.21 CSW01_05745 ATP phosphoribosyltransferase low > 62
Pantoea sp. MT58 0.21 IAI47_09165 tryptophan synthase subunit alpha 0.19 IAI47_07095 ATP phosphoribosyltransferase 0.94 12
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS11320 tryptophan synthase subunit alpha 0.22 A4249_RS10690 ATP phosphoribosyltransferase — —
Alteromonas macleodii MIT1002 0.21 MIT1002_01425 Tryptophan synthase alpha chain 0.22 MIT1002_02632 ATP phosphoribosyltransferase — —
Klebsiella michiganensis M5al 0.21 BWI76_RS11840 tryptophan synthase subunit alpha 0.23 BWI76_RS18920 ATP phosphoribosyltransferase 0.89 26
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_1740 trpA tryptophan synthase subunit alpha (RefSeq) 0.21 DvMF_1963 hisG ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) 0.84 14
Dickeya dianthicola ME23 0.20 DZA65_RS10940 tryptophan synthase subunit alpha 0.21 DZA65_RS10060 ATP phosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.20 HGI48_RS10460 tryptophan synthase subunit alpha 0.21 HGI48_RS09750 ATP phosphoribosyltransferase low > 71
Dickeya dadantii 3937 0.20 DDA3937_RS10460 tryptophan synthase subunit alpha 0.20 DDA3937_RS09740 ATP phosphoribosyltransferase 0.60 51
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.1967.1 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.19 Xcc-8004.2949.1 ATP phosphoribosyltransferase (EC 2.4.2.17) low > 74
Enterobacter asburiae PDN3 0.20 EX28DRAFT_0932 tryptophan synthase, alpha chain (EC 4.2.1.20) 0.22 EX28DRAFT_0540 ATP phosphoribosyltransferase 0.56 56
Shewanella loihica PV-4 0.20 Shew_2256 trpA tryptophan synthase subunit alpha (RefSeq) 0.21 Shew_2197 hisG ATP phosphoribosyltransferase (RefSeq) 0.92 35
Rahnella sp. WP5 0.20 EX31_RS09980 tryptophan synthase subunit alpha 0.21 EX31_RS11435 ATP phosphoribosyltransferase 0.85 73
Escherichia fergusonii Becca 0.20 EFB2_02666 Tryptophan synthase alpha chain 0.22 EFB2_01837 ATP phosphoribosyltransferase low > 86
Enterobacter sp. TBS_079 0.20 MPMX20_02514 Tryptophan synthase alpha chain 0.21 MPMX20_03001 ATP phosphoribosyltransferase 0.93 5
Escherichia coli ECOR38 0.19 HEPCGN_25515 trpA tryptophan synthase subunit alpha 0.22 HEPCGN_03225 hisG ATP phosphoribosyltransferase 0.88 38
Escherichia coli Nissle 1917 0.19 ECOLIN_RS07595 tryptophan synthase subunit alpha 0.22 ECOLIN_RS11940 ATP phosphoribosyltransferase — —
Escherichia coli BW25113 0.19 b1260 trpA tryptophan synthase subunit alpha (NCBI) 0.22 b2019 hisG ATP phosphoribosyltransferase (NCBI) 0.92 12
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_02423 Tryptophan synthase alpha chain 0.22 OHPLBJKB_01681 ATP phosphoribosyltransferase low > 73
Escherichia coli BL21 0.19 ECD_01234 tryptophan synthase, alpha subunit 0.22 ECD_01921 ATP phosphoribosyltransferase low > 61
Erwinia tracheiphila SCR3 0.19 LU632_RS12775 trpA tryptophan synthase subunit alpha 0.20 LU632_RS08950 hisG ATP phosphoribosyltransferase low > 74
Escherichia coli ECRC62 0.19 BNILDI_18480 trpA tryptophan synthase subunit alpha 0.22 BNILDI_14745 hisG ATP phosphoribosyltransferase 0.88 71
Escherichia coli ECOR27 0.19 NOLOHH_20335 trpA tryptophan synthase subunit alpha 0.22 NOLOHH_15835 hisG ATP phosphoribosyltransferase low > 75
Pectobacterium carotovorum WPP14 0.19 HER17_RS10940 tryptophan synthase subunit alpha 0.21 HER17_RS12225 ATP phosphoribosyltransferase 0.95 26
Escherichia coli ECRC98 0.19 JDDGAC_05220 trpA tryptophan synthase subunit alpha 0.22 JDDGAC_28630 hisG ATP phosphoribosyltransferase 0.87 35
Escherichia coli ECRC99 0.19 KEDOAH_26075 trpA tryptophan synthase subunit alpha 0.22 KEDOAH_03630 hisG ATP phosphoribosyltransferase — —
Escherichia coli ECRC102 0.19 NIAGMN_26845 trpA tryptophan synthase subunit alpha 0.22 NIAGMN_22465 hisG ATP phosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF2726 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.21 GFF3913 ATP phosphoribosyltransferase (EC 2.4.2.17) low > 78
Escherichia coli ECRC101 0.19 MCAODC_15590 trpA tryptophan synthase subunit alpha 0.22 MCAODC_20420 hisG ATP phosphoribosyltransferase 0.75 64
Escherichia coli ECRC100 0.19 OKFHMN_02675 trpA tryptophan synthase subunit alpha 0.22 OKFHMN_24520 hisG ATP phosphoribosyltransferase 0.84 54
Shewanella amazonensis SB2B 0.18 Sama_2134 trpA tryptophan synthase subunit alpha (RefSeq) 0.21 Sama_1941 hisG ATP phosphoribosyltransferase (RefSeq) 0.87 59

Not shown: 46 genomes with orthologs for BBR_RS15810 only; 9 genomes with orthologs for BBR_RS15790 only