Conservation of cofitness between Atu3472 and Atu3480 in Agrobacterium fabrum C58

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3472 2-oxoisovalerate dehydrogenase subunit beta 1.0 Atu3480 hydroxymethylglutaryl-CoA lyase 0.22 11
Sinorhizobium meliloti 1021 0.92 SMc03202 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.44 SM_b21125 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (from data) 0.77 3
Pseudomonas putida KT2440 0.79 PP_4402 branched-chain alpha-keto acid dehydrogenase complex, beta subunit 0.58 PP_3540 Hydroxymethylglutaryl-CoA lyase
Variovorax sp. OAS795 0.78 ABID97_RS06675 alpha-ketoacid dehydrogenase subunit beta 0.49 ABID97_RS25100 hydroxymethylglutaryl-CoA lyase low > 91
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_3541 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.59 PfGW456L13_2594 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.72 18
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) 0.58 Pf6N2E2_2189 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.37 28
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_22985 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.57 AO356_01570 hydroxymethylglutaryl-CoA lyase 0.43 21
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_26640 2-oxoisovalerate dehydrogenase 0.58 AO353_20365 hydroxymethylglutaryl-CoA lyase
Pseudomonas sp. RS175 0.77 PFR28_02446 2-oxoisovalerate dehydrogenase subunit beta 0.58 PFR28_01262 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_4479 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.59 Pf1N1B4_3990 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.49 5
Pseudomonas simiae WCS417 0.77 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.60 PS417_17005 hydroxymethylglutaryl-CoA lyase
Pseudomonas fluorescens SBW25 0.76 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.59 PFLU_RS18955 hydroxymethylglutaryl-CoA lyase low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.59 PFLU_RS18955 hydroxymethylglutaryl-CoA lyase 0.26 51
Castellaniella sp019104865 MT123 0.75 ABCV34_RS04970 alpha-ketoacid dehydrogenase subunit beta 0.53 ABCV34_RS14190 hydroxymethylglutaryl-CoA lyase 0.97 15
Brevundimonas sp. GW460-12-10-14-LB2 0.72 A4249_RS13195 alpha-ketoacid dehydrogenase subunit beta 0.36 A4249_RS14615 hydroxymethylglutaryl-CoA lyase
Alteromonas macleodii MIT1002 0.50 MIT1002_02013 2-oxoisovalerate dehydrogenase subunit beta 0.53 MIT1002_01665 Hydroxymethylglutaryl-CoA lyase YngG low > 70
Shewanella sp. ANA-3 0.50 Shewana3_2130 transketolase, central region (RefSeq) 0.51 Shewana3_1668 hydroxymethylglutaryl-CoA lyase (RefSeq)
Shewanella amazonensis SB2B 0.50 Sama_1710 alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) 0.56 Sama_1358 pyruvate carboxyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.49 SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) 0.51 SO1893 mvaB hydroxymethylglutaryl-CoA lyase (NCBI ptt file)
Shewanella loihica PV-4 0.49 Shew_1926 transketolase, central region (RefSeq) 0.56 Shew_2574 pyruvate carboxyltransferase (RefSeq)
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_1476 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 0.56 B158DRAFT_2506 Isopropylmalate/homocitrate/citramalate synthases
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS18445 alpha-ketoacid dehydrogenase subunit beta 0.51 ABZR86_RS20630 hydroxymethylglutaryl-CoA lyase
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_00750 acoB alpha-ketoacid dehydrogenase subunit beta 0.52 OKGIIK_09340 hydroxymethylglutaryl-CoA lyase
Lysobacter sp. OAE881 0.41 ABIE51_RS04040 alpha-ketoacid dehydrogenase subunit beta 0.54 ABIE51_RS13205 hydroxymethylglutaryl-CoA lyase low > 62
Ralstonia solanacearum UW163 0.41 UW163_RS14255 alpha-ketoacid dehydrogenase subunit beta 0.55 UW163_RS03145 hydroxymethylglutaryl-CoA lyase
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS00945 alpha-ketoacid dehydrogenase subunit beta 0.55 RALBFv3_RS10435 hydroxymethylglutaryl-CoA lyase low > 76
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS05880 alpha-ketoacid dehydrogenase subunit beta 0.50 LRK54_RS02285 hydroxymethylglutaryl-CoA lyase
Rhodanobacter denitrificans MT42 0.40 LRK55_RS05635 alpha-ketoacid dehydrogenase subunit beta 0.50 LRK55_RS02040 hydroxymethylglutaryl-CoA lyase
Ralstonia solanacearum PSI07 0.40 RPSI07_RS16525 alpha-ketoacid dehydrogenase subunit beta 0.56 RPSI07_RS22880 hydroxymethylglutaryl-CoA lyase low > 81
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS33050 2-oxoisovalerate dehydrogenase 0.53 RR42_RS00955 hydroxymethylglutaryl-CoA lyase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.570.1 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.52 Xcc-8004.2923.1 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) 0.60 12
Ralstonia solanacearum GMI1000 0.39 RS_RS09075 alpha-ketoacid dehydrogenase subunit beta 0.55 RS_RS01280 hydroxymethylglutaryl-CoA lyase low > 80

Not shown: 3 genomes with orthologs for Atu3472 only; 30 genomes with orthologs for Atu3480 only