Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Agrobacterium fabrum C58 | 1.0 | Atu3472 | | 2-oxoisovalerate dehydrogenase subunit beta | 1.0 | Atu3480 | | hydroxymethylglutaryl-CoA lyase | 0.22 | 11 |
Sinorhizobium meliloti 1021 | 0.92 | SMc03202 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.44 | SM_b21125 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (from data) | 0.77 | 3 |
Pseudomonas putida KT2440 | 0.79 | PP_4402 | | branched-chain alpha-keto acid dehydrogenase complex, beta subunit | 0.58 | PP_3540 | | Hydroxymethylglutaryl-CoA lyase | — | — |
Variovorax sp. OAS795 | 0.78 | ABID97_RS06675 | | alpha-ketoacid dehydrogenase subunit beta | 0.49 | ABID97_RS25100 | | hydroxymethylglutaryl-CoA lyase | low | > 91 |
Pseudomonas fluorescens GW456-L13 | 0.78 | PfGW456L13_3541 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.59 | PfGW456L13_2594 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.72 | 18 |
Pseudomonas fluorescens FW300-N2E2 | 0.78 | Pf6N2E2_480 | | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) | 0.58 | Pf6N2E2_2189 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.37 | 28 |
Pseudomonas fluorescens FW300-N2C3 | 0.78 | AO356_22985 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.57 | AO356_01570 | | hydroxymethylglutaryl-CoA lyase | 0.43 | 21 |
Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_26640 | | 2-oxoisovalerate dehydrogenase | 0.58 | AO353_20365 | | hydroxymethylglutaryl-CoA lyase | — | — |
Pseudomonas sp. RS175 | 0.77 | PFR28_02446 | | 2-oxoisovalerate dehydrogenase subunit beta | 0.58 | PFR28_01262 | | 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy- methylglutaryl-CoA lyase | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.77 | Pf1N1B4_4479 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | 0.59 | Pf1N1B4_3990 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.49 | 5 |
Pseudomonas simiae WCS417 | 0.77 | PS417_17550 | | branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) | 0.60 | PS417_17005 | | hydroxymethylglutaryl-CoA lyase | — | — |
Pseudomonas fluorescens SBW25 | 0.76 | PFLU_RS19360 | | alpha-ketoacid dehydrogenase subunit beta | 0.59 | PFLU_RS18955 | | hydroxymethylglutaryl-CoA lyase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.76 | PFLU_RS19360 | | alpha-ketoacid dehydrogenase subunit beta | 0.59 | PFLU_RS18955 | | hydroxymethylglutaryl-CoA lyase | 0.26 | 51 |
Castellaniella sp019104865 MT123 | 0.75 | ABCV34_RS04970 | | alpha-ketoacid dehydrogenase subunit beta | 0.53 | ABCV34_RS14190 | | hydroxymethylglutaryl-CoA lyase | 0.97 | 15 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.72 | A4249_RS13195 | | alpha-ketoacid dehydrogenase subunit beta | 0.36 | A4249_RS14615 | | hydroxymethylglutaryl-CoA lyase | — | — |
Alteromonas macleodii MIT1002 | 0.50 | MIT1002_02013 | | 2-oxoisovalerate dehydrogenase subunit beta | 0.53 | MIT1002_01665 | | Hydroxymethylglutaryl-CoA lyase YngG | low | > 70 |
Shewanella sp. ANA-3 | 0.50 | Shewana3_2130 | | transketolase, central region (RefSeq) | 0.51 | Shewana3_1668 | | hydroxymethylglutaryl-CoA lyase (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.50 | Sama_1710 | | alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) | 0.56 | Sama_1358 | | pyruvate carboxyltransferase (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.49 | SO2340 | | alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) | 0.51 | SO1893 | mvaB | hydroxymethylglutaryl-CoA lyase (NCBI ptt file) | — | — |
Shewanella loihica PV-4 | 0.49 | Shew_1926 | | transketolase, central region (RefSeq) | 0.56 | Shew_2574 | | pyruvate carboxyltransferase (RefSeq) | — | — |
Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_1476 | | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit | 0.56 | B158DRAFT_2506 | | Isopropylmalate/homocitrate/citramalate synthases | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS18445 | | alpha-ketoacid dehydrogenase subunit beta | 0.51 | ABZR86_RS20630 | | hydroxymethylglutaryl-CoA lyase | — | — |
Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_00750 | acoB | alpha-ketoacid dehydrogenase subunit beta | 0.52 | OKGIIK_09340 | | hydroxymethylglutaryl-CoA lyase | — | — |
Lysobacter sp. OAE881 | 0.41 | ABIE51_RS04040 | | alpha-ketoacid dehydrogenase subunit beta | 0.54 | ABIE51_RS13205 | | hydroxymethylglutaryl-CoA lyase | low | > 62 |
Ralstonia solanacearum UW163 | 0.41 | UW163_RS14255 | | alpha-ketoacid dehydrogenase subunit beta | 0.55 | UW163_RS03145 | | hydroxymethylglutaryl-CoA lyase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.41 | RALBFv3_RS00945 | | alpha-ketoacid dehydrogenase subunit beta | 0.55 | RALBFv3_RS10435 | | hydroxymethylglutaryl-CoA lyase | low | > 76 |
Rhodanobacter denitrificans FW104-10B01 | 0.40 | LRK54_RS05880 | | alpha-ketoacid dehydrogenase subunit beta | 0.50 | LRK54_RS02285 | | hydroxymethylglutaryl-CoA lyase | — | — |
Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS05635 | | alpha-ketoacid dehydrogenase subunit beta | 0.50 | LRK55_RS02040 | | hydroxymethylglutaryl-CoA lyase | — | — |
Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS16525 | | alpha-ketoacid dehydrogenase subunit beta | 0.56 | RPSI07_RS22880 | | hydroxymethylglutaryl-CoA lyase | low | > 81 |
Cupriavidus basilensis FW507-4G11 | 0.40 | RR42_RS33050 | | 2-oxoisovalerate dehydrogenase | 0.53 | RR42_RS00955 | | hydroxymethylglutaryl-CoA lyase | low | > 128 |
Xanthomonas campestris pv. campestris strain 8004 | 0.40 | Xcc-8004.570.1 | | Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) | 0.52 | Xcc-8004.2923.1 | | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.60 | 12 |
Ralstonia solanacearum GMI1000 | 0.39 | RS_RS09075 | | alpha-ketoacid dehydrogenase subunit beta | 0.55 | RS_RS01280 | | hydroxymethylglutaryl-CoA lyase | low | > 80 |
Not shown: 3 genomes with orthologs for Atu3472 only; 30 genomes with orthologs for Atu3480 only