Conservation of cofitness between Atu3289 and Atu2747 in Agrobacterium fabrum C58

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3289 thiamine-phosphate pyrophosphorylase 1.0 Atu2747 hypothetical protein 0.69 19
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU2362 thiE-2 thiamine-phosphate pyrophosphorylase (TIGR) 0.30 DVU0051 conserved hypothetical protein TIGR00044 (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_3007 thiE thiamine-phosphate pyrophosphorylase (RefSeq) 0.27 DvMF_2208 alanine racemase domain protein (RefSeq) low > 51
Rhizobium sp. OAE497 0.28 ABIE40_RS25925 thiamine phosphate synthase 0.76 ABIE40_RS19180 YggS family pyridoxal phosphate-dependent enzyme — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS17410 thiamine phosphate synthase 0.29 ABZR86_RS09305 YggS family pyridoxal phosphate-dependent enzyme — —
Fusobacterium nucleatum SB010 0.24 HUW76_10295 thiamine phosphate synthase 0.22 HUW76_07280 YggS family pyridoxal phosphate-dependent enzyme low > 35
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_17095 Thiamine-phosphate synthase 0.29 OKGIIK_09885 Pyridoxal phosphate homeostasis protein low > 52
Bacteroides thetaiotaomicron VPI-5482 0.22 BT0652 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) 0.25 BT1332 conserved hypothetical protein (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02360 thiamine-phosphate diphosphorylase 0.24 BACOVA_00593 pyridoxal phosphate enzyme, YggS family low > 94
Lysobacter sp. OAE881 0.20 ABIE51_RS17410 thiamine phosphate synthase 0.31 ABIE51_RS16060 YggS family pyridoxal phosphate-dependent enzyme — —
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS14675 thiamine phosphate synthase 0.23 HMPREF1181_RS10865 YggS family pyridoxal phosphate-dependent enzyme low > 56
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS08830 thiamine phosphate synthase 0.25 ABZR88_RS11740 YggS family pyridoxal phosphate-dependent enzyme low > 71
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_06355 thiamine-phosphate pyrophosphorylase 0.31 AO353_10505 hypothetical protein low > 101
Phocaeicola dorei CL03T12C01 0.20 ABI39_RS17750 thiamine phosphate synthase 0.21 ABI39_RS20000 YggS family pyridoxal phosphate-dependent enzyme low > 72
Pseudomonas simiae WCS417 0.20 PS417_24605 thiamine-phosphate pyrophosphorylase 0.28 PS417_26725 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.20 OH686_09190 Thiamin-phosphate pyrophosphorylase 0.30 OH686_10975 Pyridoxal phosphate-containing protein YggS low > 80
Phocaeicola vulgatus CL09T03C04 0.20 HMPREF1058_RS03290 thiamine phosphate synthase 0.21 HMPREF1058_RS06240 YggS family pyridoxal phosphate-dependent enzyme low > 67
Pseudomonas fluorescens SBW25 0.19 PFLU_RS26535 thiamine phosphate synthase 0.27 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme low > 109
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS26535 thiamine phosphate synthase 0.27 PFLU_RS28370 YggS family pyridoxal phosphate-dependent enzyme low > 109
Marinobacter adhaerens HP15 0.19 HP15_348 thiamine-phosphate pyrophosphorylase 0.26 HP15_288 alanine racemase domain protein — —
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_4341 thiamine-phosphate diphosphorylase 0.31 Psyr_0477 Protein of unknown function UPF0001 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_4341 thiamine-phosphate diphosphorylase 0.31 Psyr_0477 Protein of unknown function UPF0001 low > 86
Pseudomonas sp. RS175 0.19 PFR28_03844 Thiamine-phosphate synthase 0.26 PFR28_04242 Pyridoxal phosphate homeostasis protein low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_0216 thiamine-phosphate pyrophosphorylase 0.24 Echvi_2233 pyridoxal phosphate enzyme, YggS family low > 79
Pseudomonas stutzeri RCH2 0.19 Psest_0536 thiamine-phosphate pyrophosphorylase 0.29 Psest_0284 pyridoxal phosphate enzyme, YggS family low > 67
Mycobacterium tuberculosis H37Rv 0.19 Rv0414c Thiamine-phosphate pyrophosphorylase ThiE (TMP pyrophosphorylase) (TMP-PPASE) (thiamine-phosphate synthase) 0.21 Rv2148c Conserved protein — —
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_5023 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.27 Pf6N2E2_4601 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC low > 103
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS20175 thiamine-phosphate diphosphorylase 0.23 CA265_RS06285 YggS family pyridoxal phosphate enzyme low > 88
Phaeobacter inhibens DSM 17395 0.19 PGA1_c09050 thiamine-phosphate pyrophosphorylase ThiE 0.53 PGA1_c33360 putative alanine racemase low > 62
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_1384 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.27 PfGW456L13_1011 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC low > 87
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_15430 thiamine-phosphate pyrophosphorylase 0.29 AO356_13425 hypothetical protein low > 104
Rhodanobacter denitrificans MT42 0.17 LRK55_RS06320 thiamine phosphate synthase 0.32 LRK55_RS02655 YggS family pyridoxal phosphate-dependent enzyme low > 63
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS06575 thiamine phosphate synthase 0.32 LRK54_RS02905 YggS family pyridoxal phosphate-dependent enzyme low > 59
Serratia liquefaciens MT49 0.16 IAI46_01315 thiamine phosphate synthase 0.25 IAI46_21410 YggS family pyridoxal phosphate-dependent enzyme low > 86
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS17770 thiamine-phosphate pyrophosphorylase 0.34 BPHYT_RS03495 hypothetical protein — —

Not shown: 3 genomes with orthologs for Atu3289 only; 66 genomes with orthologs for Atu2747 only